Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.3e-174 616.3 317 100.0
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 7.0e-152 540.8 317 86.4
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 9.1e-144 513.8 317 81.7
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.0e-142 510.4 317 78.9
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 8.5e-142 507.3 316 79.4
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.5e-141 505.8 317 79.2
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.2e-141 505.4 315 79.7
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 4.2e-141 505.0 317 80.4
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 9.4e-141 503.8 315 78.1
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.6e-140 503.1 315 77.8
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 2.1e-140 502.7 316 78.2
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 2.1e-140 502.7 317 77.9
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.7e-140 502.3 317 79.2
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 4.7e-140 501.5 315 77.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 6.1e-140 501.1 317 80.4
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 6.1e-140 501.1 314 78.3
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 8.0e-140 500.7 314 78.3
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 8.0e-140 500.7 298 88.3
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 2.3e-139 499.2 323 77.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.0e-139 498.8 317 79.8
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.2e-138 496.9 317 77.6
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.2e-138 496.9 318 78.0
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.2e-138 496.9 317 77.3
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.5e-138 496.5 315 76.2
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.6e-138 495.7 319 77.4
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 3.7e-137 491.9 317 77.9
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 3.1e-136 488.8 320 77.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 2.7e-135 485.7 317 76.3
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.5e-135 485.3 316 76.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 7.7e-135 484.2 317 75.4
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.9e-133 479.6 316 76.9
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.5e-133 479.2 306 77.1
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.3e-133 478.4 306 76.8
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 2.1e-132 476.1 316 76.9
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 4.7e-132 474.9 317 73.5
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.8e-131 473.0 315 74.6
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.9e-131 470.7 307 76.2
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 2.6e-130 469.2 317 73.8
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.4e-130 468.8 315 72.1
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 9.8e-130 467.2 316 71.8
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.9e-129 465.7 316 71.5
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.7e-129 465.3 316 71.2
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 8.3e-129 464.2 337 71.5
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 4.1e-128 461.8 316 71.5
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 4.1e-128 461.8 316 71.5
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 4.1e-128 461.8 316 70.9
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 7.0e-128 461.1 316 71.5
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 2.0e-127 459.5 303 75.9
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 2.0e-127 459.5 317 71.9
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 2.7e-127 459.1 316 73.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 2.7e-127 459.1 316 71.2
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.7e-127 459.1 303 75.9
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.7e-127 459.1 317 75.4
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 4.6e-127 458.4 316 70.3
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 5.9e-127 458.0 316 72.2
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 5.9e-127 458.0 360 66.7
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.3e-126 456.8 318 71.4
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.3e-126 456.8 317 72.2
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 3.9e-126 455.3 309 72.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 8.6e-126 454.1 322 69.9
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 8.6e-126 454.1 317 71.3
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.1e-125 453.8 312 74.0
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 3.3e-125 452.2 317 70.7
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 5.6e-125 451.4 317 70.3
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.6e-124 448.7 317 70.3
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 8.0e-124 447.6 296 73.6
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 5.2e-123 444.9 324 67.6
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 7.5e-122 441.0 319 71.5
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 9.8e-122 440.7 303 71.3
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 8.3e-121 437.6 303 70.3
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.9e-120 436.4 314 68.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.9e-120 436.4 317 66.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 9.2e-120 434.1 317 70.0
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-118 430.6 306 71.9
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 8.6e-118 427.6 269 79.2
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 2.5e-117 426.0 317 66.6
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 5.6e-117 424.9 303 67.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-116 423.3 317 69.7
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 7.5e-114 414.5 317 66.2
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 2.9e-113 412.5 317 67.2
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.4e-112 410.2 338 65.7
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 8.1e-108 394.4 270 72.6
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.1e-104 384.0 315 64.8
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.1e-100 369.8 255 73.3
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.2e-98 364.0 270 70.4
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.2e-98 364.0 270 70.4
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.2e-98 364.0 316 62.0
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 7.8e-95 351.3 247 70.9
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 3.1e-91 339.3 238 69.7
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.9e-89 332.8 322 51.2
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.6e-87 327.0 255 67.5
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.5e-87 325.9 315 49.5
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.0e-82 310.1 317 52.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 6.4e-81 305.1 212 70.8
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.2e-80 302.4 315 47.6
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 5.5e-80 302.0 315 48.3
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 3.9e-78 295.8 194 74.2
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 5.1e-78 295.4 180 81.1
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 7.4e-77 291.6 331 52.9
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 3.7e-76 289.3 215 66.5
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 7.9e-71 271.6 238 58.8
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.6e-68 263.8 268 52.2
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.1e-67 259.6 308 41.6
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.0e-62 244.6 147 82.3
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.8e-59 233.8 339 40.1
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.1e-48 198.0 127 74.8
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 2.7e-47 193.4 129 72.1
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.8e-43 180.6 228 45.6
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.1e-35 154.8 246 39.4
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 2.7e-34 150.2 103 71.8
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 4.1e-27 126.3 88 70.5
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 4.7e-23 112.8 70 78.6
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 6.1e-23 112.5 93 61.3
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.4e-22 111.3 193 37.3
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.7e-10 70.5 72 47.2
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 4.7e-07 59.7 44 59.1
MELO3C033367.2 Cucumis melo HOM05D006919 ORTHO05D170968 1.1e-06 58.5 59 57.6


User provided reference genes

Program Settings