Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 5.5e-248 860.5 441 100.0
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.9e-172 609.0 439 72.0
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.1e-168 597.0 413 75.5
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.5e-168 596.7 439 72.9
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 2.8e-167 592.4 403 76.7
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 3.1e-166 589.0 437 70.5
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.9e-164 582.4 431 70.3
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.9e-164 582.4 429 72.7
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.4e-163 580.1 429 72.7
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.2e-163 578.6 417 73.6
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 4.2e-163 578.6 440 70.0
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 7.9e-162 574.3 435 68.7
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.0e-161 573.9 426 69.5
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.4e-161 573.5 434 68.0
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 3.9e-161 572.0 410 73.4
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.5e-160 570.1 434 67.3
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 4.3e-160 568.5 444 68.5
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.7e-160 568.2 417 72.2
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 9.7e-160 567.4 438 68.9
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 8.2e-159 564.3 424 70.5
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.1e-158 563.9 426 69.5
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.2e-157 560.5 439 69.0
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 5.9e-157 558.1 450 65.3
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 2.9e-156 555.8 450 68.0
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.4e-155 553.5 435 67.6
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 1.4e-153 547.0 442 66.1
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 3.9e-153 545.4 418 68.7
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 8.8e-153 544.3 431 67.3
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 2.0e-152 543.1 446 67.7
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 9.7e-152 540.8 435 67.4
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 9.7e-152 540.8 437 64.3
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.7e-151 540.0 434 64.7
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.7e-151 538.9 406 67.0
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 8.2e-151 537.7 417 66.7
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 7.0e-150 534.6 380 71.3
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.5e-149 533.5 417 66.7
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 1.0e-148 530.8 435 63.7
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 2.2e-148 529.6 427 64.4
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 3.8e-148 528.9 426 66.0
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 9.4e-147 524.2 406 67.5
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 6.1e-146 521.5 409 65.8
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 6.7e-145 518.1 436 62.8
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 4.4e-144 515.4 431 62.2
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 5.7e-144 515.0 416 65.9
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.3e-143 513.8 424 63.0
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.3e-143 513.8 434 62.7
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.1e-142 510.8 410 65.9
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.8e-142 510.0 410 65.9
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 9.1e-142 507.7 434 61.8
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.7e-140 503.4 434 61.8
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 1.2e-136 490.7 345 70.7
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 2.8e-135 486.1 431 63.6
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 6.3e-135 485.0 406 63.5
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 3.1e-134 482.6 450 57.3
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 5.3e-134 481.9 424 59.9
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.3e-132 477.2 411 60.3
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.9e-132 476.1 426 62.0
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 8.0e-130 468.0 431 56.8
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.8e-129 466.8 426 59.4
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 5.2e-129 465.3 426 59.6
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.8e-121 440.3 355 65.6
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.0e-121 439.1 445 52.1
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.6e-120 436.4 409 55.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 6.3e-119 431.8 440 53.4
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 7.8e-117 424.9 429 53.6
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.5e-115 420.6 430 53.0
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.5e-115 420.6 430 53.0
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.5e-115 420.6 386 59.3
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 2.5e-115 419.9 430 52.8
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 3.3e-115 419.5 433 52.9
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 9.5e-115 417.9 430 52.8
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 8.0e-114 414.8 438 50.7
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.0e-113 414.5 430 53.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 6.8e-113 411.8 401 54.1
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 8.9e-113 411.4 436 52.8
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 5.8e-112 408.7 344 62.5
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 2.2e-111 406.8 429 51.3
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 6.6e-108 395.2 320 66.2
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.9e-102 377.1 334 56.9
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.1e-102 375.9 379 53.0
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.0e-100 371.3 379 52.8
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 5.1e-100 369.0 301 65.1
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.1e-94 348.6 393 47.6
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 6.0e-93 345.5 319 60.8
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 5.8e-88 328.9 376 47.3
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.3e-83 313.2 359 46.8
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 2.8e-82 310.1 414 41.3
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 9.0e-81 305.1 412 43.0
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.6e-77 294.3 245 62.9
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 2.5e-75 287.0 308 51.9
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.8e-68 264.2 308 47.7
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 3.8e-63 246.5 399 39.1
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.9e-59 234.2 389 39.6
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 8.2e-58 228.8 601 28.8
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 3.2e-54 216.9 193 60.1
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 6.1e-45 186.0 116 78.4
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 1.5e-43 181.4 247 41.3
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 8.5e-39 165.6 132 62.1
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 3.1e-33 147.1 131 60.3
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 4.0e-28 130.2 134 52.2
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 7.0e-25 119.4 99 63.6
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.6e-24 118.2 370 28.9
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.5e-22 110.9 80 72.5
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 6.1e-21 106.3 78 66.7
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.5e-19 101.7 83 62.7
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 9.8e-19 99.0 86 61.6
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 2.4e-17 94.4 237 32.1
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.6e-13 81.6 61 62.3
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.7e-13 80.9 61 72.1
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.0e-12 79.0 54 74.1
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 9.8e-11 72.4 75 53.3
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 9.8e-11 72.4 37 89.2
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 3.3e-06 57.4 43 58.1
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 9.5e-06 55.8 41 63.4


User provided reference genes

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