Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p026162 Quercus lobata HOM05D004517 ORTHO05D005366 2.8e-65 251.9 139 100.0
CiPaw.06G148000 Carya illinoinensis HOM05D004517 ORTHO05D005366 2.5e-13 79.3 67 70.1
QL04p096680 Quercus lobata HOM05D004517 ORTHO05D005366 9.6e-13 77.4 61 73.8
Haze_01662 Corylus avellana HOM05D004517 ORTHO05D005366 1.6e-12 76.6 73 65.8
Ah.03g137090 Amaranthus hybridus HOM05D004517 ORTHO05D005366 8.1e-12 74.3 60 70.0
FAN08G3228 Fragaria x ananassa HOM05D004517 ORTHO05D005366 1.4e-11 73.6 70 62.9
Cpa.g.sc113.67 Carica papaya HOM05D004517 ORTHO05D005366 1.8e-11 73.2 70 62.9
CiPaw.05G043700 Carya illinoinensis HOM05D004517 ORTHO05D005366 2.4e-11 72.8 68 64.7
EL10Ac6g14070 Beta vulgaris HOM05D004517 ORTHO05D005366 4.0e-11 72.0 109 43.1
FAN13G2755 Fragaria x ananassa HOM05D004517 ORTHO05D005366 6.9e-11 71.2 77 55.8
FvH4_5g29610 Fragaria vesca HOM05D004517 ORTHO05D005366 9.0e-11 70.9 70 60.0
FAN04G1222 Fragaria x ananassa HOM05D004517 ORTHO05D005366 9.0e-11 70.9 70 60.0
FAN18G2310 Fragaria x ananassa HOM05D004517 ORTHO05D005366 9.0e-11 70.9 70 60.0
MD15G1422000 Malus domestica HOM05D004517 ORTHO05D005366 9.0e-11 70.9 66 62.1
Manes.10G130100 Manihot esculenta HOM05D004517 ORTHO05D005366 9.0e-11 70.9 72 55.6
RcHm_v2.0_Chr7g0222671 Rosa chinensis HOM05D004517 ORTHO05D005366 1.2e-10 70.5 75 60.0
Lalb_Chr07g0185721 Lupinus albus HOM05D004517 ORTHO05D005366 1.5e-10 70.1 74 59.5
Prupe.1G567400 Prunus persica HOM05D004517 ORTHO05D005366 1.5e-10 70.1 71 59.2
MD08G1228000 Malus domestica HOM05D004517 ORTHO05D005366 2.0e-10 69.7 64 64.1
PGR142G2391 Punica granatum HOM05D004517 ORTHO05D005366 2.0e-10 69.7 56 64.3
TWI59G1197 Tripterygium wilfordii HOM05D004517 ORTHO05D005366 2.0e-10 69.7 69 63.8
Gohir.A03G211300 Gossypium hirsutum HOM05D004517 ORTHO05D005366 2.6e-10 69.3 71 63.4
Gohir.A12G032100 Gossypium hirsutum HOM05D004517 ORTHO05D005366 2.6e-10 69.3 71 62.0
Gohir.D12G040200 Gossypium hirsutum HOM05D004517 ORTHO05D005366 2.6e-10 69.3 71 62.0
Gorai.008G041900 Gossypium raimondii HOM05D004517 ORTHO05D005366 2.6e-10 69.3 71 62.0
Gohir.D02G232900 Gossypium hirsutum HOM05D004517 ORTHO05D005366 3.4e-10 68.9 71 63.4
Gorai.005G260700 Gossypium raimondii HOM05D004517 ORTHO05D005366 3.4e-10 68.9 71 63.4
Atru.chr4.59 Acer truncatum HOM05D004517 ORTHO05D005366 4.4e-10 68.6 69 58.0
AUR62042719 Chenopodium quinoa HOM05D004517 ORTHO05D005366 4.4e-10 68.6 73 58.9
arahy.Tifrunner.gnm1.ann1.57R94V Arachis hypogaea HOM05D004517 ORTHO05D005366 7.6e-10 67.8 73 58.9
arahy.Tifrunner.gnm1.ann1.RA8HQM Arachis hypogaea HOM05D004517 ORTHO05D005366 7.6e-10 67.8 73 58.9
CsaV3_6G037380 Cucumis sativus L. HOM05D004517 ORTHO05D005366 7.6e-10 67.8 77 58.4
PGR042G1879 Punica granatum HOM05D004517 ORTHO05D005366 9.9e-10 67.4 85 51.8
CSS0045081 Camellia sinensis var. sinensis HOM05D004517 ORTHO05D005366 1.3e-09 67.0 77 54.5
AUR62014267 Chenopodium quinoa HOM05D004517 ORTHO05D005366 1.3e-09 67.0 74 55.4
MELO3C014379.2 Cucumis melo HOM05D004517 ORTHO05D005366 1.3e-09 67.0 78 57.7
Manes.07G015100 Manihot esculenta HOM05D004517 ORTHO05D005366 1.7e-09 66.6 72 54.2
ClCG09G014350 Citrullus lanatus HOM05D004517 ORTHO05D005366 3.8e-09 65.5 54 68.5
Sed0012766 Sechium edule HOM05D004517 ORTHO05D005366 3.8e-09 65.5 81 51.9
Sabra03G0011100 Salix brachista HOM05D004517 ORTHO05D005366 4.9e-09 65.1 68 58.8
CSS0006387 Camellia sinensis var. sinensis HOM05D004517 ORTHO05D005366 6.4e-09 64.7 77 53.2
Ca_01805_v3 Cicer arietinum L. HOM05D004517 ORTHO05D005366 6.4e-09 64.7 70 58.6
Thecc.02G039300 Theobroma cacao HOM05D004517 ORTHO05D005366 6.4e-09 64.7 68 64.7
Duzib052G0369 Durio zibethinus HOM05D004517 ORTHO05D005366 8.4e-09 64.3 73 56.2
Lalb_Chr13g0295731 Lupinus albus HOM05D004517 ORTHO05D005366 1.4e-08 63.5 74 55.4
Carub.0006s2255 Capsella rubella HOM05D004517 ORTHO05D005366 1.9e-08 63.2 76 55.3
Lj6g0021954 Lotus japonicus HOM05D004517 ORTHO05D005366 1.9e-08 63.2 93 48.4
TAR381G0217 Trochodendron aralioides HOM05D004517 ORTHO05D005366 2.4e-08 62.8 64 57.8
AT5G24690 Arabidopsis thaliana HOM05D004517 ORTHO05D005366 3.2e-08 62.4 77 54.5
Glyma.08G185500 Glycine max HOM05D004517 ORTHO05D005366 4.2e-08 62.0 82 56.1
TAR628G0747 Trochodendron aralioides HOM05D004517 ORTHO05D005366 4.2e-08 62.0 91 48.4
MSTRG.16525 Avicennia marina HOM05D004517 ORTHO05D005366 5.4e-08 61.6 73 54.8
Medtr2g081000 Medicago truncatula HOM05D004517 ORTHO05D005366 5.4e-08 61.6 68 58.8
AL6G36300 Arabidopsis lyrata HOM05D004517 ORTHO05D005366 7.1e-08 61.2 76 53.9
Cc02_g22420 Coffea canephora HOM05D004517 ORTHO05D005366 7.1e-08 61.2 72 61.1
COL.COLO4_17875 Corchorus olitorius HOM05D004517 ORTHO05D005366 7.1e-08 61.2 72 55.6
Potri.003G019600 Populus trichocarpa HOM05D004517 ORTHO05D005366 7.1e-08 61.2 57 61.4
SalBow6G5703 Salvia bowleyana HOM05D004517 ORTHO05D005366 7.1e-08 61.2 76 55.3
TWI14G0624 Tripterygium wilfordii HOM05D004517 ORTHO05D005366 7.1e-08 61.2 69 55.1
Potri.001G210500 Populus trichocarpa HOM05D004517 ORTHO05D005366 9.3e-08 60.8 74 52.7
THA.LOC104803318 Tarenaya hassleriana HOM05D004517 ORTHO05D005366 9.3e-08 60.8 97 42.3
HanXRQChr06g0185081 Helianthus annuus HOM05D004517 ORTHO05D005366 1.2e-07 60.5 67 56.7
Psat5g246640 Pisum sativum HOM05D004517 ORTHO05D005366 1.2e-07 60.5 71 56.3
Glyma.15G047200 Glycine max HOM05D004517 ORTHO05D005366 1.6e-07 60.1 90 52.2
HanXRQChr03g0066801 Helianthus annuus HOM05D004517 ORTHO05D005366 1.6e-07 60.1 64 57.8
TPR.G15461 Trifolium pratense HOM05D004517 ORTHO05D005366 1.6e-07 60.1 70 54.3
Solyc10g045630.2 Solanum lycopersicum HOM05D004517 ORTHO05D005366 2.7e-07 59.3 85 47.1
Sopen10g015980 Solanum pennellii HOM05D004517 ORTHO05D005366 2.7e-07 59.3 85 47.1
CARHR188780 Cardamine hirsuta HOM05D004517 ORTHO05D005366 3.5e-07 58.9 76 50.0
Lalb_Chr12g0204431 Lupinus albus HOM05D004517 ORTHO05D005366 3.5e-07 58.9 79 48.1
CANSAT11G0269 Cannabis sativa HOM05D004517 ORTHO05D005366 4.6e-07 58.5 69 52.2
DCAR_013989 Daucus carota HOM05D004517 ORTHO05D005366 6.0e-07 58.2 69 56.5
SalBow5G4543 Salvia bowleyana HOM05D004517 ORTHO05D005366 6.0e-07 58.2 80 51.2
THA.LOC104798997 Tarenaya hassleriana HOM05D004517 ORTHO05D005366 7.9e-07 57.8 83 43.4
Thhalv10003985m.g Eutrema salsugineum HOM05D004517 ORTHO05D005366 1.3e-06 57.0 81 51.9
Oeu012748.1 Olea europaea HOM05D004517 ORTHO05D005366 1.3e-06 57.0 101 44.6
Duzib132G0873 Durio zibethinus HOM05D004517 ORTHO05D005366 2.3e-06 56.2 77 54.5
CDE12G0288 Ceratophyllum demersum HOM05D004517 ORTHO05D005366 3.9e-06 55.5 76 48.7
Sabra01G0162600 Salix brachista HOM05D004517 ORTHO05D005366 3.9e-06 55.5 74 50.0
ECA240G0862 Erigeron canadensis HOM05D004517 ORTHO05D005366 5.1e-06 55.1 69 53.6
Sc03g0005930 Simmondsia chinensis HOM05D004517 ORTHO05D005366 5.1e-06 55.1 76 50.0
Lsat_1_v5_gn_9_118341 Lactuca sativa HOM05D004517 ORTHO05D005366 6.6e-06 54.7 73 50.7
Oeu008886.2 Olea europaea HOM05D004517 ORTHO05D005366 6.6e-06 54.7 79 50.6
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 8.7e-06 54.3 79 49.4
VMungo0540G0447 Vigna mungo HOM05D004517 ORTHO05D005366 8.7e-06 54.3 78 48.7


User provided reference genes

Program Settings