Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 3.1e-295 1017.7 499 100.0
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 1.5e-129 467.2 499 53.1
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.0e-125 454.5 498 53.2
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 8.8e-117 424.9 498 50.2
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 1.8e-114 417.2 499 49.1
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.2e-113 414.5 498 49.4
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.0e-113 413.7 499 49.9
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 3.5e-113 412.9 501 49.3
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 5.9e-113 412.1 499 49.3
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 5.9e-113 412.1 499 49.5
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 1.3e-112 411.0 503 48.5
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 2.2e-112 410.2 497 48.5
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 5.0e-112 409.1 500 48.2
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 5.0e-112 409.1 489 50.1
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 5.0e-112 409.1 500 48.0
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 8.5e-112 408.3 498 48.2
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 1.5e-111 407.5 498 48.6
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 4.2e-111 406.0 502 47.4
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 7.2e-111 405.2 497 47.9
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 1.2e-110 404.4 499 47.7
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 2.1e-110 403.7 498 48.2
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 3.6e-110 402.9 502 48.6
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 3.6e-110 402.9 498 48.4
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 3.6e-110 402.9 500 47.6
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 1.0e-109 401.4 498 49.0
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 1.4e-109 401.0 498 48.2
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 1.8e-109 400.6 499 48.3
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 1.1e-108 397.9 501 47.3
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 2.0e-108 397.1 503 47.3
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.0e-108 397.1 499 48.1
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 5.7e-108 395.6 499 47.3
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 5.7e-108 395.6 502 47.6
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 7.5e-108 395.2 505 47.9
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 9.7e-108 394.8 502 47.4
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 9.7e-108 394.8 499 47.9
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 1.7e-107 394.0 499 47.1
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.7e-107 394.0 498 46.4
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 1.7e-107 394.0 504 46.2
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.7e-107 394.0 502 48.0
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 2.8e-107 393.3 501 46.5
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 4.8e-107 392.5 503 46.1
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.1e-106 391.3 502 47.2
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 1.4e-106 391.0 499 45.7
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 1.4e-106 391.0 498 47.4
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.4e-106 391.0 502 47.2
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 2.4e-106 390.2 499 47.3
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 2.4e-106 390.2 503 46.7
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 3.1e-106 389.8 499 46.3
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.1e-106 389.8 502 47.0
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 7.0e-106 388.7 499 47.1
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.2e-105 387.9 500 46.0
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 1.2e-105 387.9 499 46.1
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.2e-105 387.9 497 45.9
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 1.2e-105 387.9 500 46.0
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 2.0e-105 387.1 498 46.4
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 3.5e-105 386.3 501 46.7
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 3.5e-105 386.3 501 46.7
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 5.9e-105 385.6 499 47.1
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 7.7e-105 385.2 499 46.9
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 2.2e-104 383.6 507 46.7
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.9e-104 383.3 498 45.6
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.9e-104 383.3 509 47.0
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 3.8e-104 382.9 499 46.5
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 8.5e-104 381.7 511 46.2
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 8.5e-104 381.7 507 45.6
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.1e-103 381.3 450 50.0
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 1.9e-103 380.6 500 45.6
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 2.5e-103 380.2 500 45.4
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 7.2e-103 378.6 500 45.4
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 7.2e-103 378.6 501 44.9
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.1e-102 377.1 506 45.3
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 2.7e-102 376.7 507 45.6
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 3.6e-102 376.3 505 45.5
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 3.6e-102 376.3 497 46.5
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 8.0e-102 375.2 501 45.7
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 8.0e-102 375.2 500 46.6
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.8e-101 374.0 499 44.3
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.8e-101 374.0 505 45.1
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 1.8e-101 374.0 500 45.0
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 2.3e-101 373.6 508 45.3
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 4.0e-101 372.9 499 44.3
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 4.0e-101 372.9 498 46.2
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 6.8e-101 372.1 498 45.0
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 6.8e-101 372.1 498 45.0
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 6.8e-101 372.1 503 45.3
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 8.8e-101 371.7 501 44.1
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 8.8e-101 371.7 498 46.0
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 2.0e-100 370.5 502 44.0
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 2.6e-100 370.2 508 44.9
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 2.6e-100 370.2 496 45.4
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 9.8e-100 368.2 461 46.6
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 9.8e-100 368.2 503 44.7
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.3e-99 367.9 505 44.8
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 7.0e-98 362.1 498 44.6
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 2.2e-96 357.1 497 45.1
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 6.5e-96 355.5 508 43.7
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 3.6e-94 349.7 499 43.9
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.0e-93 348.2 502 43.8
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.8e-93 347.4 495 43.6
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 3.0e-93 346.7 497 43.7
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 8.8e-93 345.1 504 43.5
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 1.1e-87 328.2 507 41.6
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.2e-86 324.7 437 43.7
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 6.1e-86 322.4 442 45.5
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 2.3e-85 320.5 441 43.8
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 3.4e-84 316.6 464 43.1
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 3.0e-80 303.5 500 39.8
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 7.8e-73 278.9 205 67.8
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 6.4e-67 259.2 441 36.7
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.9e-63 247.7 363 43.5
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.3e-63 246.9 352 44.3
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.6e-62 244.6 358 43.9
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.5e-60 238.0 186 66.1
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-60 236.9 386 40.7
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 4.4e-60 236.5 439 33.5
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 7.6e-60 235.7 345 43.8
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 3.2e-58 230.3 351 42.2
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 8.6e-56 222.2 186 64.5
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 2.5e-55 220.7 344 41.3
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.4e-52 210.3 118 89.8
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.4e-50 203.0 149 71.8
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.1e-47 195.3 191 50.8
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 7.3e-47 192.6 119 79.8
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 5.3e-45 186.4 122 74.6
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.8e-44 183.0 113 78.8
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 6.6e-40 169.5 146 64.4
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.8e-37 161.4 154 57.1
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.7e-35 154.8 99 80.8
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 9.0e-21 105.9 69 75.4
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 2.5e-18 97.8 120 49.2
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 4.2e-10 70.5 49 65.3
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 1.7e-06 58.5 38 60.5
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 6.3e-06 56.6 55 60.0


User provided reference genes

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