Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p023002 Quercus lobata HOM05D005816 ORTHO05D006915 1.3e-44 183.0 115 100.0
CiPaw.15G126000 Carya illinoinensis HOM05D005816 ORTHO05D006915 6.9e-17 90.9 121 51.2
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 1.3e-15 86.7 113 46.0
Duzib205G0672 Durio zibethinus HOM05D005816 ORTHO05D006915 1.9e-14 82.8 119 54.6
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 5.5e-14 81.3 120 50.0
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 7.2e-14 80.9 117 47.0
CiPaw.16G083700 Carya illinoinensis HOM05D005816 ORTHO05D006915 3.6e-13 78.6 122 47.5
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 3.6e-13 78.6 118 45.8
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 7.9e-13 77.4 111 42.3
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.4e-12 76.6 116 44.8
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 1.4e-12 76.6 116 44.8
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 2.3e-12 75.9 131 42.7
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 2.3e-12 75.9 116 45.7
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 5.1e-12 74.7 117 44.4
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 5.1e-12 74.7 115 38.3
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 6.7e-12 74.3 123 39.8
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 8.8e-12 73.9 116 45.7
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 1.5e-11 73.2 115 39.1
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 1.5e-11 73.2 122 40.2
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 2.5e-11 72.4 117 40.2
MD06G1210600 Malus domestica HOM05D005816 ORTHO05D006915 2.5e-11 72.4 114 43.0
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 3.3e-11 72.0 109 51.4
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 4.3e-11 71.6 116 40.5
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 7.4e-11 70.9 115 48.7
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 7.4e-11 70.9 115 40.9
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 1.3e-10 70.1 116 49.1
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 1.3e-10 70.1 116 37.9
Sed0000064 Sechium edule HOM05D005816 ORTHO05D006915 3.7e-10 68.6 115 40.0
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 4.8e-10 68.2 115 40.9
MD14G1221300 Malus domestica HOM05D005816 ORTHO05D006915 4.8e-10 68.2 112 41.1
MELO3C005357.2 Cucumis melo HOM05D005816 ORTHO05D006915 1.1e-09 67.0 120 37.5
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 1.1e-09 67.0 121 39.7
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 1.1e-09 67.0 113 49.6
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 1.8e-09 66.2 105 41.0
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 2.4e-09 65.9 120 42.5
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 2.4e-09 65.9 125 37.6
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 2.4e-09 65.9 103 39.8
Gohir.D13G069300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 3.1e-09 65.5 118 38.1
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 3.1e-09 65.5 118 38.1
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 3.1e-09 65.5 115 38.3
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 4.1e-09 65.1 104 38.5
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 4.1e-09 65.1 117 35.9
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 5.3e-09 64.7 126 36.5
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 5.3e-09 64.7 119 37.8
Medtr1g093800 Medicago truncatula HOM05D005816 ORTHO05D006915 5.3e-09 64.7 115 39.1
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 5.3e-09 64.7 119 41.2
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 5.3e-09 64.7 117 41.0
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 5.3e-09 64.7 121 36.4
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 6.9e-09 64.3 58 63.8
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 6.9e-09 64.3 125 37.6
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 6.9e-09 64.3 125 37.6
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 6.9e-09 64.3 117 38.5
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 9.1e-09 63.9 115 40.0
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.2e-08 63.5 116 39.7
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 1.2e-08 63.5 116 37.1
Gohir.A13G071300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.2e-08 63.5 119 36.1
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 1.5e-08 63.2 106 41.5
Carub.0002s1536 Capsella rubella HOM05D005816 ORTHO05D006915 4.5e-08 61.6 123 36.6
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 5.9e-08 61.2 114 38.6
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 7.7e-08 60.8 116 37.1
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 7.7e-08 60.8 132 38.6
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 1.0e-07 60.5 117 40.2
Thhalv10019343m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 1.3e-07 60.1 116 34.5
ClCG01G005730 Citrullus lanatus HOM05D005816 ORTHO05D006915 2.2e-07 59.3 107 36.4
Manes.01G021100 Manihot esculenta HOM05D005816 ORTHO05D006915 2.2e-07 59.3 71 39.4
PGR044G2006 Punica granatum HOM05D005816 ORTHO05D006915 2.2e-07 59.3 107 42.1
RcHm_v2.0_Chr4g0435951 Rosa chinensis HOM05D005816 ORTHO05D006915 2.2e-07 59.3 114 37.7
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 2.9e-07 58.9 107 38.3
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 2.9e-07 58.9 107 38.3
TPR.G26768 Trifolium pratense HOM05D005816 ORTHO05D006915 2.9e-07 58.9 125 40.0
FAN17G1568 Fragaria x ananassa HOM05D005816 ORTHO05D006915 3.8e-07 58.5 107 37.4
FAN18G0325 Fragaria x ananassa HOM05D005816 ORTHO05D006915 3.8e-07 58.5 112 46.4
AL2G27750 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 5.0e-07 58.2 116 36.2
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 5.0e-07 58.2 116 36.2
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 5.0e-07 58.2 117 35.0
CARHR061620 Cardamine hirsuta HOM05D005816 ORTHO05D006915 8.5e-07 57.4 115 35.7
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 8.5e-07 57.4 123 35.0
Sed0012991 Sechium edule HOM05D005816 ORTHO05D006915 8.5e-07 57.4 108 42.6
FvH4_5g12751 Fragaria vesca HOM05D005816 ORTHO05D006915 1.1e-06 57.0 112 44.6
MELO3C017284.2 Cucumis melo HOM05D005816 ORTHO05D006915 1.4e-06 56.6 127 41.7
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 1.4e-06 56.6 103 37.9
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 1.9e-06 56.2 116 35.3
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 2.5e-06 55.8 78 38.5
Lalb_Chr13g0302361 Lupinus albus HOM05D005816 ORTHO05D006915 2.5e-06 55.8 110 43.6
BcaC08g46328 Brassica carinata HOM05D005816 ORTHO05D006915 3.2e-06 55.5 117 34.2
C06p48080 Brassica napus HOM05D005816 ORTHO05D006915 3.2e-06 55.5 115 33.9
BolC6t39316H Brassica oleracea HOM05D005816 ORTHO05D006915 3.2e-06 55.5 117 34.2
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 3.2e-06 55.5 117 38.5
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 3.2e-06 55.5 134 35.1
FAN07G2890 Fragaria x ananassa HOM05D005816 ORTHO05D006915 4.2e-06 55.1 107 36.4
BcaB05g24412 Brassica carinata HOM05D005816 ORTHO05D006915 5.5e-06 54.7 117 35.0
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 5.5e-06 54.7 129 36.4
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 5.5e-06 54.7 123 35.8
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 7.2e-06 54.3 115 31.3
MBI16_g06255_MAGBIO Magnolia biondii HOM05D005816 ORTHO05D006915 7.2e-06 54.3 116 35.3
Solyc05g009915.1 Solanum lycopersicum HOM05D005816 ORTHO05D006915 7.2e-06 54.3 109 38.5
AT1G68795 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 9.4e-06 53.9 115 34.8
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 9.4e-06 53.9 115 33.0
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 9.4e-06 53.9 115 33.0
Oeu041876.1 Olea europaea HOM05D005816 ORTHO05D006915 9.4e-06 53.9 115 33.0
PGSC0003DMG400000830 Solanum tuberosum HOM05D005816 ORTHO05D006915 9.4e-06 53.9 107 43.9


User provided reference genes

Program Settings