Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 0.0e+00 1228.4 620 100.0
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.7e-309 1064.7 602 89.4
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 1.9e-307 1058.5 603 88.2
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 2.1e-293 1011.9 605 83.5
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 2.7e-293 1011.5 604 84.1
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 1.0e-292 1009.6 605 84.8
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.4e-292 1009.2 604 83.9
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 1.4e-292 1009.2 600 82.8
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 1.8e-292 1008.8 600 83.2
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 2.3e-292 1008.4 609 82.1
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.3e-290 1002.7 606 83.5
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.7e-290 1001.1 602 83.4
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.4e-289 999.2 600 83.3
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 3.1e-289 998.0 605 82.6
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 2.0e-288 995.3 606 81.5
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 4.2e-286 987.6 605 81.7
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 1.7e-282 975.7 606 81.2
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 1.1e-281 973.0 603 80.8
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 1.2e-280 969.5 603 81.4
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.7e-279 965.7 606 80.5
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 8.5e-279 963.4 606 78.9
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.1e-278 963.0 606 78.9
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 4.2e-278 961.1 606 78.5
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.5e-278 960.7 604 79.6
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 3.6e-277 958.0 603 79.4
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 2.3e-276 955.3 603 80.4
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 3.0e-276 954.9 620 78.5
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 4.0e-276 954.5 603 80.6
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 8.8e-276 953.4 606 78.5
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 2.2e-274 948.7 607 78.4
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 4.1e-273 944.5 606 78.4
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 5.3e-273 944.1 610 78.7
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 2.7e-272 941.8 605 77.9
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 2.2e-271 938.7 615 77.2
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.9e-271 938.3 606 77.4
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 5.0e-271 937.6 606 77.1
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 1.5e-270 936.0 603 79.3
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 3.2e-270 934.9 601 78.7
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 2.7e-269 931.8 606 77.4
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 6.1e-269 930.6 606 76.9
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 1.8e-268 929.1 604 77.5
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 4.0e-268 927.9 604 77.0
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.2e-267 926.4 605 76.9
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 9.8e-267 923.3 608 77.5
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 2.8e-266 921.8 607 76.6
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 2.8e-266 921.8 610 75.4
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 3.7e-266 921.4 607 76.4
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 4.8e-266 921.0 604 76.5
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 1.1e-265 919.8 604 77.5
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 1.1e-265 919.8 604 77.0
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 1.4e-265 919.5 606 75.4
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.8e-265 919.1 602 75.9
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 2.4e-265 918.7 606 75.6
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 3.1e-265 918.3 602 75.2
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 7.0e-265 917.1 603 76.1
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 9.1e-265 916.8 610 75.6
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.6e-264 916.0 605 74.7
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 4.5e-264 914.4 622 73.2
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 7.7e-264 913.7 605 74.2
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 2.9e-263 911.8 605 74.2
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 3.8e-263 911.4 606 75.1
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 5.0e-263 911.0 605 74.4
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 6.6e-263 910.6 603 75.8
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 8.6e-263 910.2 603 74.1
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 1.1e-262 909.8 604 75.7
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 9.5e-262 906.7 606 73.8
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 2.8e-261 905.2 606 74.9
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 2.3e-260 902.1 602 74.6
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 8.9e-260 900.2 603 73.1
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 8.9e-260 900.2 602 74.3
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 1.5e-259 899.4 604 73.2
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 2.8e-258 895.2 602 75.2
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 4.9e-258 894.4 611 73.5
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 4.9e-258 894.4 610 74.4
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.4e-257 892.9 590 75.9
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 4.5e-256 887.9 603 72.5
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 7.8e-256 887.1 616 71.6
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 5.0e-255 884.4 612 72.9
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 5.0e-255 884.4 602 73.8
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 1.5e-254 882.9 603 73.3
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 7.3e-254 880.6 605 72.4
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 4.9e-250 867.8 602 73.1
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 1.4e-249 866.3 607 71.5
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 1.9e-249 865.9 586 73.0
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 4.1e-249 864.8 607 71.3
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 5.4e-249 864.4 607 71.3
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 1.0e-247 860.1 606 70.8
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 1.1e-246 856.7 606 71.6
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 2.8e-245 852.0 607 70.8
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 8.9e-244 847.0 472 88.3
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 1.2e-243 846.7 607 70.5
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 1.7e-242 842.8 602 70.9
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 7.1e-233 810.8 668 62.4
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 1.1e-230 803.5 603 67.3
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 3.6e-229 798.5 542 74.2
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 1.8e-220 769.6 606 67.3
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 1.2e-219 766.9 745 54.6
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 2.9e-218 762.3 472 78.8
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 2.6e-211 739.2 605 64.6
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 5.1e-207 724.9 617 61.4
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 4.2e-201 705.3 597 60.6
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 3.9e-199 698.7 701 52.1
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 3.9e-199 698.7 699 51.6
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 3.3e-198 695.7 765 49.7
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 7.9e-192 674.5 800 46.2
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 8.7e-191 671.0 399 83.0
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 7.4e-190 667.9 410 80.2
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.2e-186 656.4 423 78.7
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 5.9e-179 631.7 612 52.6
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 4.7e-168 595.5 541 58.8
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 1.5e-153 547.4 510 54.7
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.5e-137 493.4 366 69.7
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 4.7e-128 462.6 310 75.5
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.2e-117 427.2 396 57.8
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 7.3e-113 412.1 264 77.7
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 3.3e-105 386.7 342 59.4
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 2.2e-93 347.4 215 77.7
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 2.9e-85 320.5 338 50.6
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 3.3e-81 307.0 191 76.4
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 2.2e-77 294.3 557 37.9
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 1.1e-60 238.8 146 76.0
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.7e-43 181.0 140 68.6
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.9e-36 158.3 323 33.1
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.4e-25 120.9 74 73.0
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 3.1e-10 71.2 89 44.9
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.6e-09 68.2 49 69.4
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 4.1e-07 60.8 48 60.4


User provided reference genes

Program Settings