Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 2.5e-65 251.9 124 100.0
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 6.3e-32 141.0 124 58.9
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 5.2e-26 121.3 130 53.8
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 1.5e-25 119.8 122 54.1
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 3.3e-25 118.6 130 53.1
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 1.8e-23 112.8 116 54.3
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 4.1e-23 111.7 118 52.5
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 7.0e-23 110.9 122 49.2
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 1.6e-22 109.8 130 55.4
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 2.2e-21 105.9 123 48.0
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 4.2e-20 101.7 132 47.7
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 1.0e-18 97.1 111 54.1
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 1.0e-18 97.1 91 57.1
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.4e-18 96.7 123 53.7
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 1.4e-18 96.7 123 47.2
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 1.4e-18 96.7 131 52.7
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 8.8e-18 94.0 122 45.1
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 8.8e-18 94.0 79 57.0
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 4.4e-17 91.7 93 60.2
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 5.7e-17 91.3 121 44.6
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 7.5e-17 90.9 119 42.9
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 7.5e-17 90.9 119 42.9
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 9.8e-17 90.5 79 55.7
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 9.8e-17 90.5 79 55.7
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 1.3e-16 90.1 138 44.2
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 1.7e-16 89.7 121 43.8
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 2.8e-16 89.0 90 53.3
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 3.7e-16 88.6 126 43.7
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 4.8e-16 88.2 141 46.8
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 8.3e-16 87.4 115 42.6
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 2.4e-15 85.9 122 48.4
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 9.1e-15 84.0 106 50.0
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 9.1e-15 84.0 86 57.0
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 1.2e-14 83.6 121 49.6
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 2.0e-14 82.8 85 57.6
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 4.5e-14 81.6 117 44.4
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 4.5e-14 81.6 152 42.8
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 5.9e-14 81.3 114 43.0
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 7.7e-14 80.9 117 43.6
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 1.0e-13 80.5 152 42.1
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 1.0e-13 80.5 152 42.1
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 1.7e-13 79.7 133 41.4
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 1.7e-13 79.7 104 47.1
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 2.9e-13 79.0 133 42.1
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 2.9e-13 79.0 133 42.1
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 2.9e-13 79.0 94 52.1
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 6.5e-13 77.8 103 46.6
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 8.5e-13 77.4 95 48.4
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 1.1e-12 77.0 110 43.6
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 1.5e-12 76.6 99 49.5
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.9e-12 76.3 119 47.9
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 1.9e-12 76.3 135 41.5
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 2.5e-12 75.9 97 49.5
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 3.2e-12 75.5 78 59.0
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 1.6e-11 73.2 71 46.5
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 1.6e-11 73.2 83 49.4
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 1.6e-11 73.2 103 38.8
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 1.0e-10 70.5 111 43.2
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 1.4e-10 70.1 111 36.0
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 1.4e-10 70.1 123 43.9
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 4.0e-10 68.6 105 44.8
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 5.2e-10 68.2 99 44.4
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 8.8e-10 67.4 99 44.4
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 2.2e-08 62.8 125 36.0
TWI14G0246 Tripterygium wilfordii HOM05D056897 ORTHO05D010026 2.2e-08 62.8 125 37.6
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 2.8e-08 62.4 101 39.6
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 2.8e-08 62.4 94 47.9
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 3.7e-08 62.0 98 43.9
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 4.9e-08 61.6 75 45.3
EL10Ac5g11226 Beta vulgaris HOM05D007960 ORTHO05D010026 6.3e-08 61.2 110 38.2
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 2.4e-07 59.3 99 42.4
PGR044G2003 Punica granatum HOM05D007960 ORTHO05D010026 3.1e-07 58.9 117 31.6
Dinv36868 Davidia involucrata HOM05D007960 ORTHO05D010026 1.2e-06 57.0 119 38.7
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 1.6e-06 56.6 87 44.8
Manes.05G117000 Manihot esculenta HOM05D007960 ORTHO05D010026 7.7e-06 54.3 78 44.9


User provided reference genes

Program Settings