Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 9.1e-164 580.1 278 100.0
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 1.9e-68 263.5 282 53.2
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 5.5e-68 261.9 289 51.6
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 9.4e-68 261.2 329 48.6
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 8.8e-66 254.6 257 58.8
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 1.7e-64 250.4 282 50.7
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 5.5e-60 235.3 285 49.1
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 1.2e-59 234.2 280 46.4
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 3.6e-59 232.6 286 50.7
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 4.4e-57 225.7 279 47.7
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 1.8e-55 220.3 280 47.9
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 3.2e-52 209.5 286 47.9
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 2.0e-49 200.3 307 44.0
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 3.5e-46 189.5 282 40.1
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 2.5e-44 183.3 290 38.6
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 2.5e-44 183.3 274 39.4
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 3.6e-43 179.5 214 50.5
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 3.6e-43 179.5 247 42.1
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 3.4e-41 172.9 288 38.9
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 7.0e-39 165.2 285 38.2
Haze_19876 Corylus avellana HOM05D007687 ORTHO05D009692 2.0e-38 163.7 182 56.6
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 2.0e-38 163.7 309 40.1
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 2.0e-38 163.7 309 40.1
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 2.7e-38 163.3 282 39.4
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 7.7e-38 161.8 258 42.6
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 8.5e-37 158.3 309 39.5
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 2.7e-35 153.3 290 35.9
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 6.1e-35 152.1 290 40.3
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 6.1e-35 152.1 293 34.8
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 1.2e-33 147.9 294 34.4
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 2.0e-33 147.1 281 36.7
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 1.7e-32 144.1 190 43.7
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 1.1e-31 141.4 285 35.8
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 2.4e-31 140.2 244 43.0
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 9.1e-31 138.3 228 38.2
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 1.6e-30 137.5 286 35.3
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 5.9e-30 135.6 283 34.3
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 5.9e-30 135.6 283 34.3
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 1.7e-29 134.0 286 36.4
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 1.7e-29 134.0 288 35.8
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 3.8e-29 132.9 259 39.8
BraA03t13781Z Brassica rapa HOM05D007687 ORTHO05D009692 5.0e-29 132.5 283 34.6
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 8.6e-29 131.7 283 33.6
BcaC06g33202 Brassica carinata HOM05D007687 ORTHO05D009692 2.5e-28 130.2 298 35.9
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 2.5e-28 130.2 282 34.0
A03p46570 Brassica napus HOM05D007687 ORTHO05D009692 1.2e-27 127.9 284 34.9
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 1.2e-27 127.9 236 38.1
VMungo1215G2041 Vigna mungo HOM05D007687 ORTHO05D009692 2.1e-27 127.1 269 35.3
THA.LOC104801051 Tarenaya hassleriana HOM05D007687 ORTHO05D009692 2.8e-27 126.7 283 35.3
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 6.1e-27 125.6 278 33.8
Glyma.17G081600 Glycine max HOM05D007687 ORTHO05D009692 8.0e-27 125.2 261 36.0
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 1.0e-26 124.8 275 35.3
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 1.4e-26 124.4 220 40.9
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 3.0e-26 123.2 190 40.5
Medtr2g461550 Medicago truncatula HOM05D007687 ORTHO05D009692 4.0e-26 122.9 239 39.3
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 8.9e-26 121.7 190 40.5
CARHR274560 Cardamine hirsuta HOM05D007687 ORTHO05D009692 7.5e-25 118.6 289 34.6
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 9.8e-25 118.2 246 34.6
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 1.7e-24 117.5 280 33.2
Thhalv10015806m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 2.2e-24 117.1 282 33.0
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 2.8e-24 116.7 186 43.0
Haze_18510 Corylus avellana HOM05D007687 ORTHO05D009692 2.8e-24 116.7 184 45.7
BcaC04g23476 Brassica carinata HOM05D007687 ORTHO05D009692 4.1e-23 112.8 280 32.9
BolC9t53708H Brassica oleracea HOM05D007687 ORTHO05D009692 5.4e-23 112.5 280 32.9
BcaB04g19894 Brassica carinata HOM05D007687 ORTHO05D009692 9.2e-23 111.7 280 32.9
C09p07960 Brassica napus HOM05D007687 ORTHO05D009692 2.7e-22 110.2 279 31.9
BraA09t36360Z Brassica rapa HOM05D007687 ORTHO05D009692 1.0e-21 108.2 280 32.9
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 1.0e-21 108.2 176 42.0
A09p07100 Brassica napus HOM05D007687 ORTHO05D009692 1.3e-21 107.8 281 32.7
Phvul.003G182300 Phaseolus vulgaris HOM05D007687 ORTHO05D009692 1.3e-21 107.8 241 35.3
Carub.0008s2158 Capsella rubella HOM05D007687 ORTHO05D009692 5.0e-21 105.9 281 31.0
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 8.6e-21 105.1 189 37.0
Dinv17458 Davidia involucrata HOM05D007687 ORTHO05D009692 1.1e-20 104.8 152 40.1
Aa31LG11G2410 Aethionema arabicum HOM05D007687 ORTHO05D009692 2.8e-19 100.1 177 39.0
Medtr4g109950 Medicago truncatula HOM05D007687 ORTHO05D009692 3.6e-19 99.8 191 35.6
Glyma.05G018400 Glycine max HOM05D007687 ORTHO05D009692 1.8e-18 97.4 247 34.0
Gohir.D09G244550 Gossypium hirsutum HOM05D007687 ORTHO05D009692 8.9e-18 95.1 326 27.6
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 3.7e-16 89.7 324 25.9
TPR.G7811 Trifolium pratense HOM05D007687 ORTHO05D009692 3.7e-16 89.7 259 34.4
PGR031G0897 Punica granatum HOM05D007687 ORTHO05D009692 4.9e-16 89.4 226 33.6
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 4.9e-16 89.4 280 30.7
Aqoxy7G00617 Aquilegia oxysepala HOM05D035011 ORTHO05D031291 2.4e-15 87.0 159 36.5
PSO063G2070 Papaver somniferum HOM05D035011 ORTHO05D031291 7.0e-15 85.5 281 28.8
MELO3C002053.2 Cucumis melo HOM05D007687 ORTHO05D009692 2.3e-13 80.5 231 35.1
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 3.0e-13 80.1 156 35.9
PSO782G3609 Papaver somniferum HOM05D035011 ORTHO05D031291 1.5e-12 77.8 270 29.3
unitig_8.g4497 Utricularia gibba HOM05D007687 ORTHO05D009692 4.3e-12 76.3 261 24.1
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.6e-11 74.3 148 39.2
CDE10G0250 Ceratophyllum demersum HOM05D007687 ORTHO05D009692 8.0e-11 72.0 199 28.6
unitig_578.g15936 Utricularia gibba HOM05D007687 ORTHO05D009692 2.3e-10 70.5 268 26.9
AUR62039668 Chenopodium quinoa HOM05D024623 ORTHO05D023410 5.2e-10 69.3 364 27.2
Ah.11g047410 Amaranthus hybridus HOM05D024623 ORTHO05D023410 8.9e-10 68.6 372 23.7
Lsat_1_v5_gn_4_113740 Lactuca sativa HOM05D007687 ORTHO05D009692 2.0e-09 67.4 280 27.1
Psat1g126320 Pisum sativum HOM05D007687 ORTHO05D009692 7.5e-09 65.5 203 32.5
AUR62032137 Chenopodium quinoa HOM05D024623 ORTHO05D023410 3.7e-08 63.2 347 25.4
MSTRG.781 Avicennia marina HOM05D003025 ORTHO05D003305 4.1e-07 59.7 179 31.8
RcHm_v2.0_Chr7g0183741 Rosa chinensis HOM05D003025 ORTHO05D003305 4.1e-07 59.7 53 52.8
SGA_v2.0_scaffold59G20657 Striga asiatica HOM05D003025 ORTHO05D003305 5.4e-07 59.3 118 36.4
GSVIVG01010102001 Vitis vinifera HOM05D003025 ORTHO05D003305 7.1e-07 58.9 159 28.9
Lalb_Chr10g0099151 Lupinus albus HOM05D003025 ORTHO05D003305 1.2e-06 58.2 116 35.3
CANSAT80G0192 Cannabis sativa HOM05D003025 ORTHO05D003305 1.6e-06 57.8 78 43.6
Gohir.D12G162800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 2.7e-06 57.0 53 50.9
Gorai.008G175400 Gossypium raimondii HOM05D003025 ORTHO05D003305 2.7e-06 57.0 53 50.9
Medtr2g461480 Medicago truncatula HOM05D011573 ORTHO05D014451 2.7e-06 57.0 54 51.9
CiPaw.16G080200 Carya illinoinensis HOM05D003025 ORTHO05D003305 3.5e-06 56.6 53 50.9
AUR62003057 Chenopodium quinoa HOM05D003025 ORTHO05D003305 4.6e-06 56.2 53 54.7
AUR62007872 Chenopodium quinoa HOM05D003025 ORTHO05D003305 4.6e-06 56.2 53 54.7
Gohir.A12G159500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 4.6e-06 56.2 53 50.9
MSTRG.7727 Avicennia marina HOM05D003025 ORTHO05D003305 6.0e-06 55.8 138 29.7
FAN13G2721 Fragaria x ananassa HOM05D003025 ORTHO05D003305 6.0e-06 55.8 53 49.1
MBI14_g31150_MAGBIO Magnolia biondii HOM05D003025 ORTHO05D003305 6.0e-06 55.8 53 50.9
Oeu021806.1 Olea europaea HOM05D003025 ORTHO05D003305 6.0e-06 55.8 59 49.2
Gohir.A13G088100 Gossypium hirsutum HOM05D003025 ORTHO05D003305 7.8e-06 55.5 53 49.1
Gohir.D13G085500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 7.8e-06 55.5 53 49.1
Gorai.013G097400 Gossypium raimondii HOM05D003025 ORTHO05D003305 7.8e-06 55.5 53 49.1
Prupe.5G210100 Prunus persica HOM05D003025 ORTHO05D003305 7.8e-06 55.5 54 51.9
TPR.G14359 Trifolium pratense HOM05D011573 ORTHO05D014451 7.8e-06 55.5 196 28.1


User provided reference genes

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