Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p019966 Quercus lobata HOM05D004908 ORTHO05D006418 4.0e-193 677.9 346 100.0
Cfa019355 Carpinus fangiana HOM05D004908 ORTHO05D006418 6.9e-137 491.1 350 77.1
CiPaw.12G009100 Carya illinoinensis HOM05D004908 ORTHO05D006418 7.2e-134 481.1 350 75.4
Haze_07746 Corylus avellana HOM05D004908 ORTHO05D006418 1.3e-130 470.3 375 70.9
Prupe.5G207300 Prunus persica HOM05D004908 ORTHO05D006418 7.4e-115 417.9 351 66.1
Thecc.03G001900 Theobroma cacao HOM05D004908 ORTHO05D006418 1.7e-111 406.8 351 65.8
RcHm_v2.0_Chr7g0183321 Rosa chinensis HOM05D004908 ORTHO05D006418 3.8e-111 405.6 352 65.1
Potri.006G227300 Populus trichocarpa HOM05D004908 ORTHO05D006418 2.1e-109 399.8 346 63.9
MD14G1214000 Malus domestica HOM05D004908 ORTHO05D006418 8.0e-109 397.9 351 63.8
Dinv17436 Davidia involucrata HOM05D004908 ORTHO05D006418 4.0e-108 395.6 351 63.0
Manes.14G087300 Manihot esculenta HOM05D004908 ORTHO05D006418 5.3e-105 385.2 353 62.0
FvH4_5g13640 Fragaria vesca HOM05D004908 ORTHO05D006418 2.7e-104 382.9 353 62.6
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla HOM05D004908 ORTHO05D006418 5.9e-104 381.7 354 59.9
GSVIVG01008119001 Vitis vinifera HOM05D004908 ORTHO05D006418 5.0e-103 378.6 346 60.7
Sabra06G0175900 Salix brachista HOM05D004908 ORTHO05D006418 1.9e-102 376.7 350 62.6
TWI81G0201 Tripterygium wilfordii HOM05D004908 ORTHO05D006418 3.2e-102 375.9 348 62.9
Cpa.g.sc94.75 Carica papaya HOM05D004908 ORTHO05D006418 3.6e-101 372.5 351 61.3
Atru.chr9.517 Acer truncatum HOM05D004908 ORTHO05D006418 6.1e-101 371.7 347 60.5
Gohir.A12G276800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.3e-98 364.0 346 61.0
CANSAT80G1354 Cannabis sativa HOM05D004908 ORTHO05D006418 1.7e-98 363.6 350 59.4
Gorai.008G298500 Gossypium raimondii HOM05D004908 ORTHO05D006418 2.2e-98 363.2 346 60.7
Cc00_g03370 Coffea canephora HOM05D004908 ORTHO05D006418 8.3e-98 361.3 350 59.7
Duzib068G0428 Durio zibethinus HOM05D004908 ORTHO05D006418 1.8e-97 360.1 353 58.9
Sed0013495 Sechium edule HOM05D004908 ORTHO05D006418 2.4e-97 359.8 328 59.8
Ciclev10021158m.g Citrus clementina HOM05D004908 ORTHO05D006418 7.7e-96 354.8 346 59.5
TAR371G0785 Trochodendron aralioides HOM05D004908 ORTHO05D006418 1.0e-95 354.4 349 58.7
Eucgr.B00624 Eucalyptus grandis HOM05D004908 ORTHO05D006418 1.3e-95 354.0 352 59.9
Prupe.5G207200 Prunus persica HOM05D004908 ORTHO05D006418 1.1e-94 350.9 353 57.5
CSS0022679 Camellia sinensis var. sinensis HOM05D004908 ORTHO05D006418 6.1e-93 345.1 349 56.2
CsaV3_1G006120 Cucumis sativus L. HOM05D004908 ORTHO05D006418 1.0e-92 344.4 341 57.2
Glyma.05G019500 Glycine max HOM05D004908 ORTHO05D006418 1.0e-92 344.4 350 58.0
Gohir.D12G277800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 3.0e-92 342.8 346 57.2
ClCG04G011680 Citrullus lanatus HOM05D004908 ORTHO05D006418 5.7e-91 338.6 332 58.1
AL1G31040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 1.3e-90 337.4 344 58.1
Carub.0001s1823 Capsella rubella HOM05D004908 ORTHO05D006418 2.2e-90 336.7 344 56.4
AT1G18600 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 2.8e-90 336.3 344 57.6
A06p14680 Brassica napus HOM05D004908 ORTHO05D006418 6.3e-90 335.1 348 56.6
BraA06t24593Z Brassica rapa HOM05D004908 ORTHO05D006418 6.3e-90 335.1 348 56.6
Nn4g23471 Nelumbo nucifera HOM05D004908 ORTHO05D006418 6.3e-90 335.1 353 56.1
Rhsim08G0143800 Rhododendron simsii HOM05D004908 ORTHO05D006418 6.3e-90 335.1 388 53.4
BcaB07g31879 Brassica carinata HOM05D004908 ORTHO05D006418 8.3e-90 334.7 349 55.6
Thhalv10008142m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 1.8e-89 333.6 342 57.6
CARHR019220 Cardamine hirsuta HOM05D004908 ORTHO05D006418 2.4e-89 333.2 345 55.7
BcaC05g25755 Brassica carinata HOM05D004908 ORTHO05D006418 4.1e-89 332.4 338 56.8
C05p16860 Brassica napus HOM05D004908 ORTHO05D006418 4.1e-89 332.4 338 56.8
Sp1g16570 Schrenkiella parvula HOM05D004908 ORTHO05D006418 7.0e-89 331.6 343 56.3
BolC5t30387H Brassica oleracea HOM05D004908 ORTHO05D006418 9.2e-89 331.3 338 57.1
Ah.11g047620 Amaranthus hybridus HOM05D004908 ORTHO05D006418 1.0e-87 327.8 345 55.4
Lsat_1_v5_gn_5_22901 Lactuca sativa HOM05D004908 ORTHO05D006418 1.3e-87 327.4 354 54.2
Aa31LG7G3360 Aethionema arabicum HOM05D004908 ORTHO05D006418 3.8e-87 325.9 346 55.2
Lj9C439G11 Lonicera japonica HOM05D004908 ORTHO05D006418 1.2e-85 320.9 210 73.8
Hund02570 Selenicereus undatus HOM05D004908 ORTHO05D006418 2.1e-85 320.1 342 54.7
Manes.14G087101 Manihot esculenta HOM05D004908 ORTHO05D006418 8.0e-85 318.2 354 54.8
FAN13G1921 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.4e-84 317.4 349 55.3
AUR62039652 Chenopodium quinoa HOM05D004908 ORTHO05D006418 3.0e-84 316.2 349 52.4
Phvul.003G183300 Phaseolus vulgaris HOM05D004908 ORTHO05D006418 4.0e-84 315.8 330 55.8
THA.LOC104808039 Tarenaya hassleriana HOM05D004908 ORTHO05D006418 6.8e-84 315.1 335 55.2
FAN08G1663 Fragaria x ananassa HOM05D004908 ORTHO05D006418 8.9e-84 314.7 349 54.4
Oeu032097.2 Olea europaea HOM05D004908 ORTHO05D006418 8.9e-84 314.7 378 51.6
Peaxi162Scf01223g00009 Petunia axillaris HOM05D004908 ORTHO05D006418 8.9e-84 314.7 352 53.1
Sopen12g018880 Solanum pennellii HOM05D004908 ORTHO05D006418 4.9e-82 308.9 348 52.3
SGA_v2.0_scaffold51G18774 Striga asiatica HOM05D004908 ORTHO05D006418 6.4e-82 308.5 362 51.9
AUR62021531 Chenopodium quinoa HOM05D004908 ORTHO05D006418 8.3e-82 308.1 362 50.8
Lalb_Chr07g0178341 Lupinus albus HOM05D004908 ORTHO05D006418 1.9e-81 307.0 331 54.1
MSTRG.9592 Avicennia marina HOM05D004908 ORTHO05D006418 3.2e-81 306.2 349 53.3
TPR.G1983 Trifolium pratense HOM05D004908 ORTHO05D006418 4.1e-81 305.8 233 67.8
VMungo1215G2693 Vigna mungo HOM05D004908 ORTHO05D006418 4.1e-81 305.8 315 55.6
Medtr4g109700 Medicago truncatula HOM05D004908 ORTHO05D006418 9.2e-81 304.7 320 53.8
HanXRQChr05g0153521 Helianthus annuus HOM05D004908 ORTHO05D006418 2.7e-80 303.1 349 51.6
Aqoxy3G03654 Aquilegia oxysepala HOM05D004908 ORTHO05D006418 3.5e-80 302.8 352 51.4
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea HOM05D004908 ORTHO05D006418 6.0e-80 302.0 335 53.7
ECA246G3883 Erigeron canadensis HOM05D004908 ORTHO05D006418 1.3e-79 300.8 237 65.4
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea HOM05D004908 ORTHO05D006418 1.7e-79 300.4 353 52.7
Migut.D01626 Erythranthe guttata HOM05D004908 ORTHO05D006418 3.0e-79 299.7 303 54.1
Lj4g0028183 Lotus japonicus HOM05D004908 ORTHO05D006418 2.5e-78 296.6 295 55.9
MELO3C002041.2 Cucumis melo HOM05D004908 ORTHO05D006418 3.6e-77 292.7 318 54.4
FAN18G1888 Fragaria x ananassa HOM05D004908 ORTHO05D006418 3.6e-77 292.7 352 50.9
Nitab4.5_0001797g0080 Nicotiana tabacum HOM05D004908 ORTHO05D006418 5.2e-76 288.9 366 49.5
Duzib205G0531 Durio zibethinus HOM05D004908 ORTHO05D006418 6.8e-76 288.5 371 48.8
EL10Ac5g11159 Beta vulgaris HOM05D004908 ORTHO05D006418 9.8e-75 284.6 209 67.5
MBI16_g10851_MAGBIO Magnolia biondii HOM05D004908 ORTHO05D006418 1.7e-74 283.9 350 50.0
FAN08G0411 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.2e-74 283.5 344 51.7
FAN13G3071 Fragaria x ananassa HOM05D004908 ORTHO05D006418 3.7e-74 282.7 351 49.0
PSO478G4625 Papaver somniferum HOM05D004908 ORTHO05D006418 4.9e-74 282.3 248 58.9
Sc04g0004310 Simmondsia chinensis HOM05D004908 ORTHO05D006418 8.1e-69 265.0 333 47.7
SHI17490 Sapria himalayana HOM05D004908 ORTHO05D006418 6.8e-68 261.9 206 66.0
unitig_699.g19027 Utricularia gibba HOM05D004908 ORTHO05D006418 1.9e-65 253.8 195 63.6
SalBow7G1843 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.2e-64 251.1 318 46.2
Nitab4.5_0006506g0020 Nicotiana tabacum HOM05D004908 ORTHO05D006418 7.8e-64 248.4 212 60.8
DCAR_011562 Daucus carota HOM05D004908 ORTHO05D006418 3.9e-63 246.1 262 54.6
Prupe.3G124800 Prunus persica HOM05D004908 ORTHO05D006418 1.1e-62 244.6 359 47.4
Os01g0763100 Oryza sativa ssp. japonica HOM05D004908 ORTHO05D006418 4.0e-60 236.1 228 56.6
PSO017G5063 Papaver somniferum HOM05D004908 ORTHO05D006418 6.8e-60 235.3 350 44.6
CDE07G0469 Ceratophyllum demersum HOM05D004908 ORTHO05D006418 1.5e-59 234.2 241 50.6
PSO017G6704 Papaver somniferum HOM05D004908 ORTHO05D006418 2.0e-59 233.8 350 44.3
vmacro17622 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 3.2e-57 226.5 210 60.0
PGR083G2541 Punica granatum HOM05D004908 ORTHO05D006418 3.0e-55 219.9 346 40.8
HPP92_019201 Vanilla planifolia HOM05D004908 ORTHO05D006418 6.6e-55 218.8 232 48.7
ATR0827G189 Amborella trichopoda HOM05D004908 ORTHO05D006418 2.5e-54 216.9 204 54.9
PSO017G2617 Papaver somniferum HOM05D004908 ORTHO05D006418 3.6e-53 213.0 248 47.6
FAN13G1644 Fragaria x ananassa HOM05D004908 ORTHO05D006418 6.9e-52 208.8 207 56.5
Zm00001eb370410 Zea mays HOM05D004908 ORTHO05D006418 2.6e-51 206.8 291 46.0
Psat0s3566g0040 Pisum sativum HOM05D004908 ORTHO05D006418 1.3e-50 204.5 200 55.0
AT1G74130 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 2.2e-50 203.8 313 41.5
CARHR067290 Cardamine hirsuta HOM05D004908 ORTHO05D006418 2.9e-50 203.4 320 40.3
Carub.0002s2094 Capsella rubella HOM05D004908 ORTHO05D006418 5.4e-49 199.1 324 42.3
AL2G34040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 1.6e-48 197.6 277 44.4
Gohir.D10G255500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 2.7e-48 196.8 132 75.8
RcHm_v2.0_Chr1g0346931 Rosa chinensis HOM05D004908 ORTHO05D006418 6.2e-45 185.7 125 76.8
Carub.0002s2095 Capsella rubella HOM05D004908 ORTHO05D006418 1.5e-43 181.0 248 43.5
Pp3c22_7870 Physcomitrium patens HOM05D004908 ORTHO05D006418 2.6e-43 180.3 214 45.8
BraA07t31547Z Brassica rapa HOM05D003320 ORTHO05D003941 4.5e-43 179.5 257 45.5
Thhalv10019561m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 2.9e-42 176.8 326 40.8
SalBow7G4422 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.8e-42 176.4 332 39.2
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis HOM05D004908 ORTHO05D006418 4.9e-42 176.0 203 46.3
SalBow7G0217 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.4e-41 174.5 336 38.4
A07p40020 Brassica napus HOM05D003320 ORTHO05D003941 2.4e-41 173.7 215 49.3
Solyc12g038600.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 5.4e-41 172.6 132 65.9
FvH4_5g13620 Fragaria vesca HOM05D004908 ORTHO05D006418 7.9e-40 168.7 159 56.0
BcaC08g46817 Brassica carinata HOM05D004908 ORTHO05D006418 1.3e-39 167.9 352 36.9
Glyma.17G080300 Glycine max HOM05D004908 ORTHO05D006418 3.0e-39 166.8 170 58.2
Mapoly0086s0048 Marchantia polymorpha HOM05D004908 ORTHO05D006418 4.3e-38 162.9 204 45.6
BolC6t39860H Brassica oleracea HOM05D004908 ORTHO05D006418 2.1e-37 160.6 235 43.4
MCO07G692 Micromonas commoda HOM05D004908 ORTHO05D006418 2.4e-36 157.1 222 37.8
SalBow7G4769 Salvia bowleyana HOM05D004908 ORTHO05D006418 6.9e-36 155.6 350 38.0
C06p48280 Brassica napus HOM05D004908 ORTHO05D006418 2.6e-35 153.7 201 44.3
SEGI_05482 Sequoiadendron giganteum HOM05D004908 ORTHO05D006418 2.6e-35 153.7 159 54.7
BcaC08g46813 Brassica carinata HOM05D004908 ORTHO05D006418 3.8e-34 149.8 234 41.0
Actinidia13428 Actinidia chinensis HOM05D004908 ORTHO05D006418 7.1e-33 145.6 100 73.0
AT1G74140 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 7.1e-33 145.6 323 35.9
RcHm_v2.0_Chr6g0258631 Rosa chinensis HOM05D004908 ORTHO05D006418 1.3e-31 141.4 121 62.8
Solyc12g038590.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 1.8e-31 141.0 225 43.1
C06p48290 Brassica napus HOM05D003320 ORTHO05D003941 6.7e-31 139.0 296 34.5
Actinidia04812 Actinidia chinensis HOM05D004908 ORTHO05D006418 8.7e-31 138.7 221 43.0
BcaC08g46846 Brassica carinata HOM05D003320 ORTHO05D003941 8.7e-31 138.7 277 37.5
RcHm_v2.0_Chr7g0183341 Rosa chinensis HOM05D004908 ORTHO05D006418 1.4e-28 131.3 117 58.1
HPP92_019191 Vanilla planifolia HOM05D004908 ORTHO05D006418 4.0e-28 129.8 139 47.5
Gohir.A06G087200 Gossypium hirsutum HOM05D004908 ORTHO05D006418 6.5e-26 122.5 82 70.7
vmacro17623 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 1.4e-25 121.3 93 67.7
RcHm_v2.0_Chr6g0258651 Rosa chinensis HOM05D004908 ORTHO05D006418 5.5e-25 119.4 76 80.3
RcHm_v2.0_Chr1g0346941 Rosa chinensis HOM05D004908 ORTHO05D006418 5.0e-18 96.3 70 64.3
Dinv17434 Davidia involucrata HOM05D004908 ORTHO05D006418 3.2e-17 93.6 86 60.5
CBR_g24070 Chara braunii HOM05D000019 ORTHO05D000002 6.1e-16 89.4 101 41.6
BolC6t39863H Brassica oleracea HOM05D004908 ORTHO05D039080 3.0e-15 87.0 171 39.8
FvH4_5g13610 Fragaria vesca HOM05D004908 ORTHO05D006418 8.8e-15 85.5 73 65.8
BcaC08g46819 Brassica carinata HOM05D004908 ORTHO05D039080 4.5e-11 73.2 97 44.3
Gohir.A07G149500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 5.5e-09 66.2 43 67.4
PRCOL_00000970 Prasinoderma coloniale HOM05D049057 ORTHO05D049180 7.9e-08 62.4 148 32.4
SalBow5G5264 Salvia bowleyana HOM05D007004 ORTHO05D009040 4.4e-06 56.6 127 32.3
MELO3C034996.2 Cucumis melo HOM05D004908 ORTHO05D006418 9.7e-06 55.5 37 73.0


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