Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 5.7e-75 284.6 199 100.0
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 3.0e-52 209.1 196 81.1
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 1.5e-51 206.8 196 80.6
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 8.2e-50 201.1 197 78.2
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.2e-48 197.2 190 76.8
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 1.7e-47 193.4 201 73.6
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 5.5e-46 188.3 159 89.3
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 1.4e-44 183.7 172 82.0
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 2.2e-42 176.4 159 86.2
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 3.7e-42 175.6 199 74.4
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 6.3e-42 174.9 173 79.8
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 8.2e-42 174.5 158 84.8
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.1e-41 174.1 200 72.5
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 7.0e-41 171.4 190 75.8
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 1.6e-40 170.2 199 70.9
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 4.5e-40 168.7 168 76.8
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 5.9e-40 168.3 171 81.3
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.3e-39 167.2 203 70.4
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 3.8e-39 165.6 190 74.2
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 5.0e-39 165.2 203 70.0
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 5.0e-39 165.2 203 70.0
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 5.0e-39 165.2 196 73.0
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 6.5e-39 164.9 175 78.9
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.5e-38 163.7 191 72.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 5.5e-38 161.8 166 72.9
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 5.5e-38 161.8 176 76.1
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 5.5e-38 161.8 204 67.2
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 2.1e-37 159.8 198 71.7
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 3.6e-37 159.1 188 72.9
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 3.6e-37 159.1 169 75.1
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 1.0e-36 157.5 167 75.4
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 1.0e-36 157.5 167 74.9
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 6.8e-36 154.8 200 67.0
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 6.8e-36 154.8 159 76.1
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.2e-35 154.1 200 67.0
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 1.5e-35 153.7 205 64.4
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.5e-35 153.7 169 74.6
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.5e-35 153.7 169 77.5
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 2.0e-35 153.3 197 67.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.7e-34 150.2 179 72.1
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 3.7e-34 149.1 198 66.7
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 1.1e-33 147.5 161 78.3
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.8e-33 146.7 167 74.3
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 5.4e-33 145.2 216 60.6
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 7.0e-33 144.8 192 69.3
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 2.0e-32 143.3 174 73.0
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 2.0e-32 143.3 164 77.4
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 3.5e-32 142.5 140 83.6
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 3.5e-32 142.5 140 83.6
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 1.3e-31 140.6 142 76.8
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 2.9e-31 139.4 196 68.4
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.5e-30 137.1 167 72.5
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 3.2e-30 136.0 175 72.0
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 8.0e-29 131.3 198 62.1
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 8.0e-29 131.3 195 66.2
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 1.0e-28 131.0 197 65.5
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 3.0e-28 129.4 171 71.9
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 4.0e-28 129.0 142 78.2
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 4.0e-28 129.0 164 67.7
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 1.2e-27 127.5 169 71.0
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 2.0e-27 126.7 197 64.0
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 5.7e-27 125.2 170 68.2
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 5.7e-27 125.2 165 68.5
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.7e-26 123.6 199 63.3
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 4.9e-26 122.1 164 68.9
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 8.3e-26 121.3 151 72.2
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 7.0e-25 118.2 198 64.6
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 1.6e-24 117.1 164 67.1
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.6e-24 117.1 170 67.6
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 1.6e-24 117.1 159 67.3
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 4.5e-24 115.5 162 69.8
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 4.5e-24 115.5 169 68.0
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 5.9e-24 115.2 188 61.7
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 7.8e-24 114.8 164 67.7
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 7.8e-24 114.8 122 83.6
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 2.9e-23 112.8 162 67.9
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 4.3e-22 109.0 166 65.1
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 4.3e-22 109.0 166 65.1
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 5.6e-22 108.6 166 65.1
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 5.6e-22 108.6 166 65.1
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 9.5e-22 107.8 166 65.1
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 1.6e-21 107.1 184 59.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 1.6e-21 107.1 164 62.8
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.1e-21 106.7 129 79.1
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 6.1e-21 105.1 167 64.7
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 8.0e-21 104.8 166 62.0
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 8.0e-21 104.8 196 58.2
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 8.0e-21 104.8 199 60.3
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 8.0e-21 104.8 172 64.5
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 2.3e-20 103.2 166 60.8
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 4.0e-20 102.4 184 62.5
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 5.2e-20 102.1 164 66.5
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 6.8e-20 101.7 154 68.2
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 6.8e-20 101.7 152 44.1
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 4.4e-19 99.0 168 65.5
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 7.5e-19 98.2 167 61.7
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 7.5e-19 98.2 166 61.4
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 9.8e-19 97.8 165 61.2
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 4.9e-18 95.5 165 63.6
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 1.1e-17 94.4 167 61.1
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.4e-17 94.0 117 78.6
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 5.4e-17 92.0 164 63.4
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 1.2e-16 90.9 162 59.3
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.9e-14 83.6 162 61.1
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.6e-13 80.5 144 60.4
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.4e-12 77.4 177 54.2
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 1.8e-12 77.0 77 53.2
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 4.0e-12 75.9 124 69.4
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 2.9e-10 69.7 147 57.1


User provided reference genes

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