Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p018860 Quercus lobata HOM05D009211 ORTHO05D011170 1.5e-77 292.7 142 100.0
Haze_07693 Corylus avellana HOM05D009211 ORTHO05D011170 3.1e-35 152.1 142 60.6
Cfa019310 Carpinus fangiana HOM05D009211 ORTHO05D011170 9.1e-35 150.6 142 59.9
Atru.chr9.405 Acer truncatum HOM05D009211 ORTHO05D011170 1.5e-24 116.7 121 52.1
CiPaw.11G050900 Carya illinoinensis HOM05D009211 ORTHO05D011170 1.5e-24 116.7 137 52.6
Prupe.5G202900 Prunus persica HOM05D009211 ORTHO05D011170 8.0e-23 110.9 123 52.0
CSS0047999 Camellia sinensis var. sinensis HOM05D009211 ORTHO05D011170 5.2e-22 108.2 136 49.3
Actinidia04839 Actinidia chinensis HOM05D009211 ORTHO05D011170 6.8e-22 107.8 118 51.7
Thecc.03G098100 Theobroma cacao HOM05D009211 ORTHO05D011170 2.8e-20 102.4 126 42.1
COL.COLO4_22212 Corchorus olitorius HOM05D009211 ORTHO05D011170 1.1e-19 100.5 115 47.8
Manes.06G086800 Manihot esculenta HOM05D009211 ORTHO05D011170 2.4e-19 99.4 111 52.3
FAN08G0220 Fragaria x ananassa HOM05D009211 ORTHO05D011170 2.0e-18 96.3 134 39.6
Potri.012G066250 Populus trichocarpa HOM05D009211 ORTHO05D011170 1.0e-17 94.0 123 43.9
FAN18G1019 Fragaria x ananassa HOM05D009211 ORTHO05D011170 1.3e-17 93.6 136 39.0
FvH4_5g14220 Fragaria vesca HOM05D009211 ORTHO05D011170 1.7e-17 93.2 136 39.7
FAN13G1505 Fragaria x ananassa HOM05D009211 ORTHO05D011170 6.5e-17 91.3 136 38.2
Gorai.008G197300 Gossypium raimondii HOM05D009211 ORTHO05D011170 3.3e-16 89.0 131 41.2
Cpa.g.sc94.21 Carica papaya HOM05D009211 ORTHO05D011170 4.2e-16 88.6 135 41.5
Migut.I00442 Erythranthe guttata HOM05D009211 ORTHO05D011170 2.8e-15 85.9 136 44.1
Oeu038366.1 Olea europaea HOM05D009211 ORTHO05D011170 6.8e-14 81.3 112 47.3
Nitab4.5_0001688g0080 Nicotiana tabacum HOM05D009211 ORTHO05D011170 1.2e-13 80.5 116 42.2
Medtr4g109380 Medicago truncatula HOM05D009211 ORTHO05D011170 1.7e-12 76.6 129 42.6
Phvul.003G185900 Phaseolus vulgaris HOM05D009211 ORTHO05D011170 3.7e-12 75.5 128 42.2
VMungo1215G2572 Vigna mungo HOM05D009211 ORTHO05D011170 4.9e-12 75.1 129 42.6
TPR.G2006 Trifolium pratense HOM05D009211 ORTHO05D011170 6.3e-12 74.7 127 39.4
Glyma.17G077200 Glycine max HOM05D009211 ORTHO05D011170 8.3e-12 74.3 131 41.2
Aqoxy1G00314 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 2.4e-11 72.8 119 39.5
Sopen06g026830 Solanum pennellii HOM05D035866 ORTHO05D011170 3.1e-11 72.4 116 40.5
Solyc06g069540.1 Solanum lycopersicum HOM05D035866 ORTHO05D011170 7.0e-11 71.2 115 41.7
Aqoxy3G00486 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 9.2e-11 70.9 120 40.0
CAN.G587.37 Capsicum annuum HOM05D035866 ORTHO05D011170 1.2e-10 70.5 66 54.5
Gohir.A12G181250 Gossypium hirsutum HOM05D009211 ORTHO05D011170 4.5e-10 68.6 67 52.2
Lj4g0005212 Lotus japonicus HOM05D009211 ORTHO05D011170 7.8e-10 67.8 129 39.5
Ca_21787_v3 Cicer arietinum L. HOM05D009211 ORTHO05D011170 3.8e-09 65.5 120 41.7
DCAR_021511 Daucus carota HOM05D000113 ORTHO05D002571 3.6e-07 58.9 128 28.9


User provided reference genes

Program Settings