Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 0.0e+00 1083.6 573 100.0
QL07p010955 Quercus lobata HOM05D011274 ORTHO05D012136 1.5e-91 341.3 451 51.0
QL08p064279 Quercus lobata HOM05D011274 ORTHO05D012136 1.2e-72 278.5 466 39.1
QL07p010851 Quercus lobata HOM05D011274 ORTHO05D012136 1.4e-70 271.6 324 49.7
QL08p063661 Quercus lobata HOM05D011274 ORTHO05D012136 3.3e-67 260.4 487 38.2
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 4.3e-67 260.0 325 48.3
QL08p063692 Quercus lobata HOM05D011274 ORTHO05D012136 1.8e-65 254.6 470 37.9
QL08p045355 Quercus lobata HOM05D011274 ORTHO05D012136 4.2e-62 243.4 456 36.8
QL08p016266 Quercus lobata HOM05D011274 ORTHO05D012136 1.0e-60 238.8 354 41.5
QL08p064561 Quercus lobata HOM05D011274 ORTHO05D012136 1.0e-60 238.8 450 37.3
QL08p063682 Quercus lobata HOM05D011274 ORTHO05D012136 2.5e-59 234.2 461 36.7
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 3.9e-52 210.3 434 33.4
vmacro10955 Vaccinium macrocarpon HOM05D011274 ORTHO05D012136 4.2e-30 137.1 445 27.4
QL08p015662 Quercus lobata HOM05D011274 ORTHO05D012136 5.3e-25 120.2 132 50.8
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 4.5e-24 117.1 439 26.2
AUR62032965 Chenopodium quinoa HOM05D037678 ORTHO05D012136 1.0e-23 115.9 441 27.0
Rhsim06G0012900 Rhododendron simsii HOM05D011274 ORTHO05D012136 1.0e-20 105.9 457 24.9
Rhsim06G0014500 Rhododendron simsii HOM05D000059 ORTHO05D012136 2.8e-18 97.8 450 25.3
Ah.03g147960 Amaranthus hybridus HOM05D037678 ORTHO05D012136 3.1e-17 94.4 232 30.2
Ah.04g152570 Amaranthus hybridus HOM05D014492 ORTHO05D015818 1.4e-12 79.0 235 28.9
AUR62016894 Chenopodium quinoa HOM05D038025 ORTHO05D012136 1.8e-12 78.6 196 30.1
Ah.04g152630 Amaranthus hybridus HOM05D014492 ORTHO05D015818 2.3e-12 78.2 235 28.1
AUR62039049 Chenopodium quinoa HOM05D038025 ORTHO05D012136 2.3e-12 78.2 196 30.1
AUR62016891 Chenopodium quinoa HOM05D038025 ORTHO05D012136 3.9e-12 77.4 196 30.1
Ah.04g152650 Amaranthus hybridus HOM05D014492 ORTHO05D015818 1.1e-11 75.9 235 27.7
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.6e-11 74.7 274 28.8
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.3e-10 72.4 253 26.5
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 1.7e-10 72.0 205 29.3
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 2.2e-10 71.6 244 25.8
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 3.7e-10 70.9 250 25.2
AUR62010229 Chenopodium quinoa HOM05D014492 ORTHO05D015818 4.8e-10 70.5 230 27.4
AUR62010225 Chenopodium quinoa HOM05D014492 ORTHO05D015818 2.4e-09 68.2 230 27.0
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 7.0e-09 66.6 241 23.7
QL07p010866 Quercus lobata HOM05D011274 ORTHO05D012136 9.1e-09 66.2 65 47.7
AUR62010232 Chenopodium quinoa HOM05D014492 ORTHO05D015818 3.5e-08 64.3 230 25.7
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 4.5e-08 63.9 288 26.4
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 1.0e-07 62.8 205 28.8
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 8.5e-07 59.7 187 29.4
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.1e-06 59.3 199 27.6
Ah.04g152870 Amaranthus hybridus HOM05D025775 ORTHO05D026469 3.2e-06 57.8 178 29.2
Aqoxy7G03143 Aquilegia oxysepala HOM05D008418 ORTHO05D011146 3.2e-06 57.8 230 24.3
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 9.4e-06 56.2 133 27.8


User provided reference genes

Program Settings