Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 6.3e-154 547.4 269 100.0
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 1.6e-125 453.0 263 82.5
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 2.2e-122 442.6 298 73.5
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 9.2e-121 437.2 271 79.7
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 5.8e-115 417.9 262 76.0
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 4.9e-114 414.8 258 77.1
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 5.4e-113 411.4 247 78.9
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 2.1e-112 409.5 258 75.6
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 3.5e-112 408.7 260 75.4
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 6.0e-112 407.9 253 76.7
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 8.6e-111 404.1 262 74.4
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 1.1e-110 403.7 258 76.0
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 5.6e-110 401.4 247 76.9
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 1.4e-108 396.7 248 74.6
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.9e-108 394.0 263 73.0
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.6e-107 392.5 267 73.0
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 4.4e-107 391.7 236 78.0
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.3e-106 390.2 267 72.7
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.7e-106 389.8 263 72.6
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 2.2e-106 389.4 263 72.2
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 2.2e-106 389.4 278 69.4
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 2.9e-106 389.0 249 73.5
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.8e-106 388.7 260 73.5
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 4.9e-106 388.3 248 74.2
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 6.4e-106 387.9 263 71.9
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 1.9e-105 386.3 256 72.3
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 2.4e-105 386.0 241 72.6
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 3.2e-105 385.6 254 69.7
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 3.2e-105 385.6 267 72.3
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 5.4e-105 384.8 247 72.1
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 9.3e-105 384.0 248 73.8
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.2e-104 383.6 267 71.9
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 1.6e-104 383.3 252 73.8
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 2.1e-104 382.9 252 73.4
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 6.0e-104 381.3 252 73.4
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 1.0e-103 380.6 255 72.2
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 1.3e-103 380.2 260 70.8
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 3.0e-103 379.0 255 71.4
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 3.0e-103 379.0 247 72.1
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 3.9e-103 378.6 245 74.3
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 6.6e-103 377.9 247 72.9
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 6.6e-103 377.9 249 72.3
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 8.7e-103 377.5 256 68.4
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 2.5e-102 375.9 249 72.3
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 2.5e-102 375.9 258 70.5
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 4.3e-102 375.2 247 71.3
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 5.6e-102 374.8 247 70.9
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 5.6e-102 374.8 258 70.9
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 7.3e-102 374.4 216 79.2
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 2.8e-101 372.5 252 72.2
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 4.8e-101 371.7 254 69.7
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 6.2e-101 371.3 256 67.2
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 6.2e-101 371.3 258 69.4
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 8.1e-101 370.9 258 69.4
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.1e-100 370.5 256 69.1
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 1.1e-100 370.5 254 69.3
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 1.1e-100 370.5 255 69.8
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 1.8e-100 369.8 250 66.8
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 3.1e-100 369.0 266 65.8
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 4.0e-100 368.6 245 69.8
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 1.5e-99 366.7 250 66.8
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 2.0e-99 366.3 240 70.4
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 5.8e-99 364.8 258 67.8
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 7.6e-99 364.4 247 71.7
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 9.9e-99 364.0 260 66.2
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 9.9e-99 364.0 245 69.0
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 2.2e-98 362.8 249 68.7
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 2.2e-98 362.8 266 68.4
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 3.8e-98 362.1 251 66.1
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 4.9e-98 361.7 245 69.0
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 8.4e-98 360.9 257 65.0
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 1.1e-97 360.5 250 65.6
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.4e-97 360.1 253 68.4
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 1.4e-97 360.1 258 66.3
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 1.9e-97 359.8 255 65.5
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 2.4e-97 359.4 245 67.8
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 4.2e-97 358.6 260 65.4
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 5.4e-97 358.2 246 67.1
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 5.4e-97 358.2 253 66.0
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 7.1e-97 357.8 245 66.1
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 9.3e-97 357.5 244 68.4
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.2e-96 357.1 253 64.8
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.6e-96 356.7 257 64.6
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 4.6e-96 355.1 274 63.9
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 6.0e-96 354.8 251 64.5
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 7.9e-96 354.4 250 64.8
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 7.9e-96 354.4 250 64.8
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.3e-95 353.6 250 63.2
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.8e-95 353.2 251 64.5
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 1.8e-95 353.2 259 64.9
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 3.9e-95 352.1 256 66.0
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 6.7e-95 351.3 251 63.7
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 6.7e-95 351.3 258 62.8
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 6.7e-95 351.3 245 69.4
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 8.7e-95 350.9 254 64.6
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 8.7e-95 350.9 291 60.5
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 3.3e-94 349.0 246 65.0
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 4.3e-94 348.6 258 62.4
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 9.6e-94 347.4 260 64.2
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 3.6e-93 345.5 228 71.9
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 6.2e-93 344.7 258 62.0
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.1e-92 344.0 252 64.7
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.1e-92 344.0 252 64.7
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 2.4e-92 342.8 258 62.0
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 5.8e-91 338.2 242 66.1
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.3e-90 337.0 247 66.0
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 1.9e-89 333.2 255 61.6
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 1.8e-87 326.6 200 75.5
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 6.7e-87 324.7 200 75.0
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 1.1e-86 323.9 276 57.6
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 1.1e-84 317.4 215 73.5
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 1.2e-80 303.9 216 63.4
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 2.7e-80 302.8 180 78.9
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 1.3e-79 300.4 179 74.9
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 7.4e-78 294.7 169 78.7
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 4.5e-75 285.4 244 57.8
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.9e-74 282.7 241 57.7
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 5.0e-74 282.0 247 58.7
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 6.5e-74 281.6 250 54.0
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 9.3e-73 277.7 243 56.0
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.1e-70 270.8 224 54.5
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 1.4e-68 263.8 129 93.8
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 9.4e-65 251.1 222 52.3
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 2.1e-64 250.0 193 58.0
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 2.7e-64 249.6 181 60.2
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 4.4e-62 242.3 252 51.2
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 2.4e-60 236.5 170 60.0
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.3e-55 219.9 139 72.7
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 8.8e-55 218.0 196 53.1
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 7.4e-54 214.9 227 46.7
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 1.4e-52 210.7 130 75.4
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 3.8e-50 202.6 255 45.9
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 8.5e-50 201.4 126 74.6
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.2e-46 191.0 138 64.5
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 6.3e-45 185.3 298 39.9
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.0e-42 177.9 113 73.5
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.3e-42 177.6 198 49.0
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 2.2e-42 176.8 222 41.9
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 3.2e-41 172.9 128 60.2
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 5.5e-41 172.2 123 66.7
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 1.2e-40 171.0 301 34.2
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.8e-32 143.3 117 65.0
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 1.3e-29 134.4 65 92.3
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 1.0e-26 124.8 79 70.9
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.4e-20 103.6 99 50.5
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 4.7e-16 89.4 51 78.4
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 6.4e-13 79.0 69 55.1
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 3.9e-10 69.7 165 27.9
Pp3c1_38790 Physcomitrium patens HOM05D004915 ORTHO05D315101 2.6e-06 57.0 40 65.0
Ah.04g150580 Amaranthus hybridus HOM05D004915 ORTHO05D006048 4.4e-06 56.2 53 54.7


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