Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.2e-73 279.6 131 100.0
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.2e-73 279.6 131 100.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 3.5e-73 278.1 131 99.2
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.0e-72 276.6 131 98.5
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-72 275.4 131 98.5
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-72 275.4 131 98.5
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-72 275.4 131 98.5
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 2.3e-72 275.4 131 98.5
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-71 273.1 131 97.7
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 1.9e-71 272.3 131 96.9
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 3.3e-71 271.6 131 96.9
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 5.6e-71 270.8 131 96.9
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-70 269.6 130 96.9
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 1.6e-70 269.2 132 97.0
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 1.6e-70 269.2 132 97.0
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 6.2e-70 267.3 131 95.4
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-69 266.2 132 96.2
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.8e-69 265.8 131 95.4
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 2.3e-69 265.4 131 95.4
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 3.1e-69 265.0 128 96.9
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.8e-69 263.8 128 96.1
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 8.9e-69 263.5 131 93.9
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 1.5e-68 262.7 131 94.7
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 1.5e-68 262.7 129 95.3
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 1.5e-68 262.7 129 95.3
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 2.0e-68 262.3 132 94.7
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 5.8e-68 260.8 132 93.9
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 1.7e-67 259.2 130 94.6
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 3.5e-65 251.5 122 96.7
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-64 249.6 123 92.7
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 1.7e-64 249.2 126 93.7
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.9e-63 245.7 131 88.5
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.6e-63 244.2 118 97.5
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.6e-63 244.2 118 97.5
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 4.7e-62 241.1 132 89.4
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-61 239.6 132 87.9
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 8.9e-61 236.9 130 83.8
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.9e-59 231.9 123 90.2
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 3.7e-59 231.5 118 91.5
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 1.4e-58 229.6 131 85.5
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.6e-57 224.6 115 93.0
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.3e-56 223.0 105 98.1
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 3.0e-56 221.9 127 84.3
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.1e-55 219.9 105 97.1
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 1.9e-55 219.2 110 94.5
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 9.5e-55 216.9 144 77.8
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 6.2e-54 214.2 110 92.7
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.3e-53 212.2 105 94.3
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 3.1e-53 211.8 109 92.7
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.2e-52 209.9 126 82.5
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.0e-52 209.1 105 91.4
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 7.6e-52 207.2 108 91.7
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 7.6e-52 207.2 108 91.7
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-51 206.1 105 90.5
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.9e-51 204.5 131 77.9
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.4e-51 204.1 105 91.4
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 1.1e-50 203.4 102 95.1
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.1e-50 200.7 118 83.9
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-49 199.5 100 94.0
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 2.1e-49 199.1 97 97.9
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 1.3e-48 196.4 131 76.3
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.7e-48 196.1 105 88.6
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 5.6e-47 191.0 99 89.9
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 5.6e-47 191.0 99 89.9
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 2.8e-46 188.7 89 97.8
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.2e-46 187.6 99 88.9
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.2e-46 187.6 99 88.9
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.2e-46 187.6 99 88.9
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-45 186.4 88 97.7
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-44 182.2 89 95.5
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 4.4e-44 181.4 131 70.2
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 7.6e-44 180.6 89 94.4
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-43 179.9 89 94.4
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.4e-43 177.6 90 94.4
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 7.1e-42 174.1 92 92.4
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 2.7e-41 172.2 80 98.8
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.0e-40 170.2 95 83.2
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.1e-40 167.9 107 80.4
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 1.9e-39 166.0 87 88.5
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 81 95.1
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 81 95.1
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 81 95.1
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 81 95.1
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 81 95.1
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 9.6e-39 163.7 77 96.1
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 6.2e-38 161.0 89 83.1
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 6.9e-37 157.5 80 91.2
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.3e-35 153.3 80 90.0
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-35 153.3 80 91.2
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 2.2e-35 152.5 84 89.3
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.4e-35 151.0 92 85.9
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.4e-34 149.1 81 85.2
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.1e-34 147.5 76 90.8
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 9.3e-34 147.1 76 89.5
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 2.7e-33 145.6 89 79.8
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 6.0e-33 144.4 66 97.0
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 6.0e-33 144.4 66 97.0
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 3.9e-32 141.7 124 63.7
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 6.6e-32 141.0 96 75.0
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 6.6e-32 141.0 87 78.2
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.1e-31 140.2 80 85.0
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.3e-31 138.7 93 78.5
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.6e-31 137.1 71 90.1
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.1e-29 133.7 67 95.5
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 2.4e-29 132.5 66 95.5
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 6.9e-29 131.0 73 86.3
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 9.0e-29 130.6 66 93.9
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 9.0e-29 130.6 73 86.3
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 2.0e-28 129.4 57 100.0
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 4.5e-28 128.3 64 95.3
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 1.3e-27 126.7 73 83.6
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 2.2e-27 125.9 122 57.4
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-27 125.6 66 90.9
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-27 125.6 66 90.9
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 4.9e-27 124.8 73 82.2
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-25 120.2 74 81.1
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 3.5e-25 118.6 57 93.0
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-24 116.3 92 66.3
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 2.3e-24 115.9 69 78.3
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 5.1e-24 114.8 62 90.3
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 3.3e-23 112.1 122 54.1
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 2.8e-22 109.0 62 85.5
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 5.3e-21 104.8 49 93.9
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.0e-20 102.8 45 97.8
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.7e-19 99.8 43 97.7
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 2.2e-19 99.4 58 84.5
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.9e-19 99.0 45 97.8
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 4.2e-18 95.1 53 88.7
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 4.2e-18 95.1 45 91.1
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 5.5e-18 94.7 46 95.7
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 2.7e-17 92.4 48 91.7
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 3.5e-17 92.0 42 95.2
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 4.6e-17 91.7 54 83.3
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 1.8e-16 89.7 44 95.5
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 3.0e-16 89.0 61 70.5
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 6.7e-16 87.8 41 97.6
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 4.3e-15 85.1 84 58.3
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 7.4e-15 84.3 42 92.9
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 9.6e-15 84.0 41 92.7
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 1.3e-14 83.6 43 93.0
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 7.6e-12 74.3 40 87.5
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 7.6e-12 74.3 40 87.5
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.3e-11 73.6 34 91.2
Migut.N00577 Erythranthe guttata HOM05D000963 ORTHO05D004715 4.6e-09 65.1 51 74.5
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 7.9e-09 64.3 46 71.7


User provided reference genes

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