Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.7e-213 745.7 375 100.0
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 4.8e-184 647.9 373 86.9
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 8.5e-173 610.5 373 81.5
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 8.8e-170 600.5 371 81.4
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.3e-168 596.7 371 80.6
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 8.2e-168 594.0 374 79.4
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 4.1e-167 591.7 373 79.9
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 5.3e-167 591.3 369 80.2
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 7.0e-167 590.9 371 79.5
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.2e-166 590.1 374 78.9
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 2.6e-166 589.0 373 79.4
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 4.5e-166 588.2 373 79.6
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 3.8e-165 585.1 373 79.4
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.4e-164 583.2 371 79.2
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 2.7e-163 578.9 369 77.0
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 4.7e-163 578.2 373 78.0
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 6.3e-160 567.8 379 77.3
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 1.1e-159 567.0 379 77.0
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 1.4e-159 566.6 376 75.3
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.8e-159 566.2 373 74.5
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.4e-159 565.8 372 75.8
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.4e-159 565.8 372 75.8
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 3.1e-159 565.5 374 76.2
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 1.6e-158 563.1 370 76.8
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 4.5e-158 561.6 419 70.2
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.7e-157 559.7 369 74.8
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 2.9e-157 558.9 373 74.0
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 4.2e-156 555.1 373 74.0
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.4e-154 550.1 372 74.5
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 3.3e-153 545.4 373 74.5
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 5.7e-153 544.7 372 74.7
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 9.7e-153 543.9 361 75.3
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 1.8e-151 539.7 373 73.5
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 7.0e-151 537.7 375 72.5
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 1.2e-150 537.0 372 71.8
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 4.5e-150 535.0 376 71.5
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 5.0e-149 531.6 374 71.7
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 6.5e-149 531.2 375 71.7
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.1e-148 530.4 341 76.8
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 4.2e-148 528.5 315 82.9
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 2.7e-147 525.8 371 70.6
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 3.6e-147 525.4 315 82.2
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 5.2e-146 521.5 373 68.1
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 6.8e-146 521.2 373 71.6
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 8.8e-146 520.8 312 81.1
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 9.8e-145 517.3 365 72.1
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.7e-144 516.5 342 75.1
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 1.7e-144 516.5 375 69.9
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 2.2e-144 516.2 372 69.6
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 2.2e-144 516.2 372 70.2
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 2.8e-144 515.8 370 69.5
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 4.8e-144 515.0 372 69.9
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 8.3e-144 514.2 372 70.4
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.4e-143 513.5 372 69.4
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 3.1e-143 512.3 372 70.2
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 1.6e-142 510.0 375 68.8
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 3.5e-142 508.8 375 69.3
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 2.3e-141 506.1 374 70.9
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 3.8e-141 505.4 375 68.5
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 8.6e-141 504.2 370 68.1
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 8.6e-141 504.2 371 68.7
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 1.1e-140 503.8 375 67.7
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.9e-140 503.1 300 82.0
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 2.5e-140 502.7 388 66.5
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 7.2e-140 501.1 375 67.7
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 7.2e-140 501.1 375 67.7
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 9.5e-140 500.7 375 67.7
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.4e-138 496.9 374 69.5
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 1.8e-138 496.5 352 71.0
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 1.8e-138 496.5 379 67.8
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 3.0e-138 495.7 378 69.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 3.0e-138 495.7 341 73.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.2e-137 493.8 315 76.8
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.2e-136 489.6 378 68.3
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 8.3e-136 487.6 376 68.4
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.4e-135 486.1 281 84.3
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 5.4e-135 485.0 370 67.0
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 2.0e-134 483.0 367 68.7
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.3e-133 480.3 282 81.6
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 6.6e-133 478.0 378 66.4
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.1e-132 477.2 355 67.9
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 9.8e-129 464.2 338 70.4
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 9.8e-129 464.2 300 77.3
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 3.7e-128 462.2 378 63.5
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 1.6e-126 456.8 282 78.4
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 6.0e-126 454.9 377 62.1
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.1e-122 444.1 332 66.9
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 4.0e-122 442.2 355 64.5
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 5.4e-119 431.8 249 86.3
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 4.3e-116 422.2 466 51.7
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 2.3e-109 399.8 351 59.3
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 9.3e-103 377.9 271 68.3
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 4.8e-99 365.5 234 77.8
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 8.1e-99 364.8 325 56.6
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.7e-96 357.1 330 57.0
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.7e-96 357.1 330 57.0
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 3.5e-94 349.4 243 69.5
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 3.6e-91 339.3 206 81.6
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 2.2e-88 330.1 275 58.9
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.6e-86 322.4 252 63.9
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 3.3e-60 236.5 166 68.1
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.7e-59 233.0 222 54.5
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 2.6e-52 210.3 166 64.5
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 5.9e-41 172.6 125 72.0
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 5.5e-39 166.0 164 48.2
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.6e-38 164.5 149 55.0
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 8.5e-32 142.1 129 57.4
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 2.7e-25 120.6 85 74.1
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 2.9e-24 117.1 99 52.5
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.4e-20 103.2 133 46.6
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 1.3e-19 101.7 86 62.8
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 1.9e-07 61.2 48 64.6
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 1.9e-07 61.2 48 64.6
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 4.7e-06 56.6 47 61.7


User provided reference genes

Program Settings