Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p016665 Quercus lobata HOM05D000294 ORTHO05D000177 3.2e-33 144.4 69 100.0
QL12p004971 Quercus lobata HOM05D000294 ORTHO05D000177 7.3e-14 80.1 47 80.9
Gohir.D12G210600 Gossypium hirsutum HOM05D000294 ORTHO05D000177 2.0e-11 72.0 47 72.3
Gorai.008G226100 Gossypium raimondii HOM05D000294 ORTHO05D000177 2.0e-11 72.0 47 72.3
CiPaw.11G094300 Carya illinoinensis HOM05D000294 ORTHO05D000177 3.4e-11 71.2 45 77.8
Gohir.A12G208000 Gossypium hirsutum HOM05D000294 ORTHO05D000177 5.8e-11 70.5 47 70.2
Medtr5g030130 Medicago truncatula HOM05D000294 ORTHO05D000177 1.7e-10 68.9 49 73.5
CiPaw.12G064400 Carya illinoinensis HOM05D000294 ORTHO05D000177 6.4e-10 67.0 47 70.2
TWI81G0531 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 8.4e-10 66.6 53 64.2
Ca_25203_v3 Cicer arietinum L. HOM05D000294 ORTHO05D000177 1.1e-09 66.2 50 70.0
Psat2g136960 Pisum sativum HOM05D000294 ORTHO05D000177 4.2e-09 64.3 50 68.0
Thecc.03G226200 Theobroma cacao HOM05D000294 ORTHO05D000177 4.2e-09 64.3 56 64.3
COL.COLO4_17011 Corchorus olitorius HOM05D000294 ORTHO05D000177 5.4e-09 63.9 57 63.2
Duzib084G0541 Durio zibethinus HOM05D000294 ORTHO05D000177 7.1e-09 63.5 53 64.2
QL01p003716 Quercus lobata HOM05D000294 ORTHO05D000177 7.1e-09 63.5 39 79.5
arahy.Tifrunner.gnm1.ann1.2VF7RX Arachis hypogaea HOM05D000294 ORTHO05D000177 1.6e-08 62.4 50 66.0
arahy.Tifrunner.gnm1.ann1.DHC9UX Arachis hypogaea HOM05D000294 ORTHO05D000177 1.6e-08 62.4 50 66.0
Glyma.01G017700 Glycine max HOM05D000294 ORTHO05D000177 2.1e-08 62.0 49 67.3
Manes.15G188400 Manihot esculenta HOM05D000294 ORTHO05D000177 2.7e-08 61.6 65 53.8
Duzib205G0817 Durio zibethinus HOM05D000294 ORTHO05D000177 3.5e-08 61.2 56 62.5
Haze_08215 Corylus avellana HOM05D000294 ORTHO05D000177 4.6e-08 60.8 48 62.5
Gohir.D03G172300 Gossypium hirsutum HOM05D000294 ORTHO05D000177 6.0e-08 60.5 53 58.5
Gorai.003G183000 Gossypium raimondii HOM05D000294 ORTHO05D000177 6.0e-08 60.5 53 58.5
Lalb_Chr16g0381311 Lupinus albus HOM05D000294 ORTHO05D000177 6.0e-08 60.5 49 71.4
Glyma.09G205300 Glycine max HOM05D000294 ORTHO05D000177 7.9e-08 60.1 49 65.3
TPR.G1009 Trifolium pratense HOM05D000294 ORTHO05D000177 7.9e-08 60.1 49 65.3
VMungo1215G0696 Vigna mungo HOM05D000294 ORTHO05D000177 7.9e-08 60.1 49 67.3
Atru.chr6.1682 Acer truncatum HOM05D000294 ORTHO05D000177 3.0e-07 58.2 54 61.1
Lj4g0005694 Lotus japonicus HOM05D000294 ORTHO05D000177 3.9e-07 57.8 51 64.7
Ca_22651_v3 Cicer arietinum L. HOM05D000294 ORTHO05D000177 5.1e-07 57.4 49 69.4
Gohir.D08G176600 Gossypium hirsutum HOM05D000294 ORTHO05D000177 5.1e-07 57.4 51 64.7
Phvul.002G140600 Phaseolus vulgaris HOM05D000294 ORTHO05D000177 5.1e-07 57.4 49 65.3
TWI15G1218 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 5.1e-07 57.4 53 58.5
Actinidia25969 Actinidia chinensis HOM05D000294 ORTHO05D000177 6.7e-07 57.0 57 63.2
TAR629G3530 Trochodendron aralioides HOM05D000294 ORTHO05D000177 6.7e-07 57.0 47 61.7
Ciclev10012712m.g Citrus clementina HOM05D000294 ORTHO05D000177 8.7e-07 56.6 56 57.1
Prupe.5G034300 Prunus persica HOM05D000294 ORTHO05D000177 8.7e-07 56.6 49 65.3
Gohir.D11G029600 Gossypium hirsutum HOM05D000294 ORTHO05D000177 1.5e-06 55.8 49 59.2
Gorai.007G032400 Gossypium raimondii HOM05D000294 ORTHO05D000177 1.5e-06 55.8 49 59.2
Potri.019G051200 Populus trichocarpa HOM05D000294 ORTHO05D000177 1.9e-06 55.5 47 57.4
Medtr8g066820 Medicago truncatula HOM05D000294 ORTHO05D000177 3.3e-06 54.7 50 66.0
Nitab4.5_0006434g0040 Nicotiana tabacum HOM05D000294 ORTHO05D000177 3.3e-06 54.7 57 56.1
Actinidia03370 Actinidia chinensis HOM05D000294 ORTHO05D000177 4.3e-06 54.3 63 54.0
CSS0037473 Camellia sinensis var. sinensis HOM05D000294 ORTHO05D000177 4.3e-06 54.3 58 56.9
HanXRQChr03g0084321 Helianthus annuus HOM05D000294 ORTHO05D000177 4.3e-06 54.3 53 50.9
Peaxi162Scf00045g00127 Petunia axillaris HOM05D000294 ORTHO05D000177 4.3e-06 54.3 56 57.1
Dinv29132 Davidia involucrata HOM05D000294 ORTHO05D000177 5.6e-06 53.9 48 54.2
Gohir.A11G030900 Gossypium hirsutum HOM05D000294 ORTHO05D000177 5.6e-06 53.9 51 58.8
PGR031G0490 Punica granatum HOM05D000294 ORTHO05D000177 7.4e-06 53.5 52 55.8
Dinv25224 Davidia involucrata HOM05D000294 ORTHO05D000177 9.6e-06 53.1 57 50.9
Lsat_1_v5_gn_3_18360 Lactuca sativa HOM05D000294 ORTHO05D000177 9.6e-06 53.1 57 49.1
Lsat_1_v5_gn_6_79601 Lactuca sativa HOM05D000294 ORTHO05D000177 9.6e-06 53.1 59 47.5
Lj8A302T16 Lonicera japonica HOM05D000294 ORTHO05D000177 9.6e-06 53.1 55 54.5
Potri.013G078500 Populus trichocarpa HOM05D000294 ORTHO05D000177 9.6e-06 53.1 47 57.4


User provided reference genes

Program Settings