Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 3.3e-181 638.3 321 100.0
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 2.5e-141 505.8 314 80.6
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.7e-134 483.0 268 89.6
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 6.4e-129 464.5 297 78.8
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.1e-128 463.8 305 77.0
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 6.0e-127 458.0 306 75.5
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 8.7e-126 454.1 305 75.1
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.9e-125 453.0 297 77.4
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 7.4e-125 451.1 305 75.7
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 7.4e-125 451.1 302 75.8
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 4.8e-124 448.4 308 75.6
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 8.1e-124 447.6 309 74.8
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 1.5e-122 443.4 309 73.5
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.0e-122 443.0 301 76.1
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.0e-122 443.0 301 76.1
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 7.6e-122 441.0 308 75.3
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 9.9e-122 440.7 305 72.5
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 9.9e-122 440.7 305 74.1
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 1.7e-121 439.9 307 73.3
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.9e-121 439.1 311 72.3
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 8.4e-121 437.6 303 72.9
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.9e-120 436.4 308 73.4
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 5.5e-120 434.9 306 71.2
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 7.1e-120 434.5 306 69.9
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 7.1e-120 434.5 307 70.0
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 9.3e-120 434.1 310 72.6
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 9.3e-120 434.1 308 71.4
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 3.5e-119 432.2 304 71.4
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 2.3e-118 429.5 271 79.0
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 3.9e-118 428.7 270 80.0
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 3.3e-117 425.6 299 71.6
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 3.3e-117 425.6 306 69.9
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 3.3e-117 425.6 262 80.5
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 9.6e-117 424.1 300 70.0
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 9.6e-117 424.1 308 71.1
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 1.3e-116 423.7 310 70.6
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 2.8e-116 422.5 310 69.7
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 3.7e-116 422.2 303 71.0
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 3.7e-116 422.2 300 72.3
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 8.2e-116 421.0 298 73.8
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 8.2e-116 421.0 300 69.7
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 8.2e-116 421.0 279 78.5
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 1.4e-115 420.2 305 69.5
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 9.0e-115 417.5 301 70.1
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 2.6e-114 416.0 284 72.9
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 2.9e-113 412.5 261 77.4
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 2.9e-113 412.5 311 68.8
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 3.8e-113 412.1 268 76.5
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 6.5e-113 411.4 301 68.1
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 6.5e-113 411.4 298 69.5
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.1e-112 410.6 297 69.7
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.1e-112 410.6 308 68.8
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 4.2e-112 408.7 264 78.0
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 1.2e-111 407.1 256 80.1
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 2.1e-111 406.4 262 77.1
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 3.5e-111 405.6 295 70.2
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.0e-110 404.1 329 64.7
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.3e-110 403.7 307 66.8
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.3e-110 403.7 262 76.7
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.8e-110 403.3 307 68.1
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.1e-109 400.6 305 70.8
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 1.5e-109 400.2 311 65.6
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 1.5e-109 400.2 338 63.9
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 1.9e-109 399.8 269 73.6
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 4.3e-109 398.7 299 67.2
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 7.4e-109 397.9 305 65.6
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.3e-108 397.1 306 65.0
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.6e-108 396.7 301 66.1
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 1.1e-107 394.0 301 68.8
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 2.4e-107 392.9 297 66.7
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 2.4e-107 392.9 312 65.7
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 6.9e-107 391.3 300 69.7
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 1.2e-106 390.6 303 65.7
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 1.5e-106 390.2 302 65.9
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 2.6e-106 389.4 300 65.7
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 1.0e-105 387.5 334 61.1
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 1.0e-105 387.5 252 73.4
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 1.3e-105 387.1 286 68.9
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 3.8e-105 385.6 264 73.9
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 1.0e-102 377.5 311 62.7
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 1.8e-102 376.7 298 65.1
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.8e-102 376.7 306 66.3
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.1e-101 374.0 304 65.8
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 1.5e-101 373.6 301 65.4
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 2.5e-101 372.9 270 71.5
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 9.1e-99 364.4 267 67.8
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 5.0e-97 358.6 247 74.9
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 9.4e-96 354.4 372 57.8
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 6.1e-95 351.7 265 68.3
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 1.0e-94 350.9 303 61.1
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.4e-94 350.5 298 59.1
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 3.0e-94 349.4 273 63.4
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 6.7e-94 348.2 266 63.9
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 1.2e-90 337.4 302 58.6
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 1.5e-90 337.0 322 57.8
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.9e-88 330.1 242 68.2
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 9.4e-88 327.8 326 55.5
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 8.8e-86 321.2 299 56.2
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 3.3e-85 319.3 249 66.7
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 5.7e-85 318.5 254 63.0
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 2.0e-82 310.1 239 67.8
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 8.0e-79 298.1 190 77.4
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 5.2e-78 295.4 205 75.1
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.2e-77 294.3 265 55.8
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 8.3e-68 261.5 175 73.7
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 2.4e-67 260.0 165 77.6
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 3.8e-65 252.7 264 51.9
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 4.2e-64 249.2 263 50.6
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 6.8e-62 241.9 164 73.2
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 2.0e-61 240.4 260 48.1
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.2e-59 233.0 146 77.4
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 1.0e-57 228.0 160 74.4
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 1.6e-55 220.7 283 42.0
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 8.6e-49 198.4 174 61.5
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 5.8e-45 185.7 179 62.6
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 9.9e-37 158.3 144 58.3
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 1.4e-35 154.5 278 34.5
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.4e-35 152.5 155 56.1
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 6.6e-33 145.6 117 67.5
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 3.3e-32 143.3 172 48.8
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 2.1e-31 140.6 118 65.3
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 8.1e-31 138.7 95 71.6
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.4e-29 132.9 84 75.0
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 4.4e-29 132.9 83 75.9
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 8.4e-28 128.6 69 87.0
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 3.2e-27 126.7 68 86.8
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 1.3e-25 121.3 207 35.7
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 6.6e-25 119.0 79 73.4
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 9.0e-22 108.6 280 31.1
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 7.4e-08 62.4 92 39.1


User provided reference genes

Program Settings