Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 2.5e-220 768.5 390 100.0
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 6.9e-210 733.8 390 94.6
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 6.5e-176 620.9 392 79.6
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 4.8e-171 604.7 392 77.8
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 9.1e-162 573.9 376 76.6
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 3.6e-150 535.4 392 65.6
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 4.4e-148 528.5 391 67.5
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.9e-147 525.8 393 65.4
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.9e-146 523.1 389 65.8
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 1.9e-146 523.1 389 66.6
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 7.8e-145 517.7 393 64.1
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 3.0e-144 515.8 393 64.4
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.0e-144 515.8 393 63.9
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 4.3e-143 511.9 393 63.9
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 7.3e-143 511.1 392 64.5
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 2.1e-142 509.6 390 63.3
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 8.1e-142 507.7 387 66.4
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 2.6e-140 502.7 389 64.3
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.6e-140 502.7 391 62.4
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 9.8e-140 500.7 391 63.4
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 1.7e-139 500.0 393 64.4
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 3.7e-139 498.8 391 63.4
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 8.3e-139 497.7 392 64.0
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 1.9e-138 496.5 392 62.0
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.2e-137 493.8 392 64.3
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 2.1e-137 493.0 392 62.5
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 2.7e-137 492.7 391 62.7
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.7e-136 490.0 391 62.1
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 3.0e-136 489.2 393 62.3
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 9.5e-135 484.2 392 61.5
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 1.2e-134 483.8 391 61.9
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 2.8e-134 482.6 391 60.6
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 8.1e-134 481.1 393 61.1
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 4.0e-133 478.8 392 59.2
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 2.0e-132 476.5 390 58.7
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 3.4e-132 475.7 392 59.4
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 7.6e-132 474.6 391 59.8
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 1.3e-131 473.8 394 61.7
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.7e-131 473.4 392 58.9
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 2.9e-131 472.6 391 60.6
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 6.4e-131 471.5 394 60.4
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 1.4e-130 470.3 389 58.4
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.9e-130 469.9 392 59.7
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 2.4e-130 469.5 393 58.8
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 5.4e-130 468.4 392 58.9
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 4.6e-129 465.3 347 67.1
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 4.6e-129 465.3 392 60.2
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 6.0e-129 464.9 392 59.9
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.7e-128 463.4 373 61.4
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 2.3e-128 463.0 392 58.4
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 3.9e-128 462.2 392 59.7
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 6.6e-128 461.5 392 57.9
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 1.1e-127 460.7 393 59.3
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 2.5e-127 459.5 391 58.8
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 3.3e-127 459.1 392 58.7
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 2.0e-124 449.9 391 56.3
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 4.9e-123 445.3 395 56.2
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 8.4e-123 444.5 391 57.5
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 2.7e-121 439.5 395 56.2
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 1.1e-119 434.1 395 55.7
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.5e-119 433.7 391 57.5
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 1.9e-119 433.3 411 53.8
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 4.3e-119 432.2 394 57.9
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 1.3e-118 430.6 388 55.2
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 1.8e-117 426.8 392 55.4
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 6.9e-117 424.9 387 56.1
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 1.5e-116 423.7 390 54.6
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 7.6e-116 421.4 390 54.1
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 9.9e-116 421.0 390 53.8
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 2.2e-115 419.9 418 53.1
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.6e-113 413.7 417 51.6
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.6e-113 413.7 417 51.6
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 2.3e-112 409.8 395 54.4
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.3e-112 409.8 392 53.6
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 3.9e-112 409.1 417 50.8
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 7.3e-111 404.8 392 52.3
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 8.1e-110 401.4 389 50.1
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 1.4e-109 400.6 419 52.0
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 5.3e-109 398.7 389 50.1
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.5e-108 397.1 389 50.9
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 5.8e-108 395.2 391 49.1
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 7.6e-108 394.8 390 50.8
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 7.6e-108 394.8 393 51.7
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.4e-106 389.8 389 49.9
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 4.2e-106 389.0 404 50.0
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 1.3e-104 384.0 393 49.9
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 3.9e-104 382.5 390 49.7
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 3.3e-103 379.4 392 49.5
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 1.6e-102 377.1 391 49.1
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 4.0e-101 372.5 397 49.1
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 2.6e-100 369.8 392 51.3
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 4.5e-100 369.0 392 50.5
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 2.9e-99 366.3 314 58.6
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 2.5e-98 363.2 397 47.9
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.5e-98 363.2 394 46.7
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 4.2e-98 362.5 386 48.2
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 1.6e-97 360.5 341 55.1
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 7.9e-97 358.2 396 47.7
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.9e-95 353.6 398 46.5
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.4e-93 346.7 398 45.7
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 2.4e-93 346.7 384 48.2
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 5.3e-93 345.5 263 62.7
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 1.2e-92 344.4 396 46.5
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.0e-92 343.6 391 45.3
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.1e-90 337.8 373 46.9
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.7e-89 333.2 393 44.3
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 2.7e-89 333.2 393 44.3
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 1.3e-88 330.9 393 46.6
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.2e-84 317.8 270 57.0
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 1.8e-80 303.9 333 47.4
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 2.9e-75 286.6 295 49.8
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 5.7e-63 245.7 179 69.8
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 3.5e-60 236.5 421 36.8
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 2.5e-42 177.2 377 32.1
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.6e-41 174.5 311 37.9
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 1.6e-41 174.5 246 37.8
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 4.4e-39 166.4 392 29.3
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 2.7e-36 157.1 268 38.4
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 2.1e-33 147.5 336 29.2
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 2.3e-32 144.1 388 30.7
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 7.8e-28 129.0 180 43.3
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.0e-27 128.6 438 29.0
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.3e-24 117.5 382 25.4
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.3e-24 117.5 382 25.4
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 3.1e-24 117.1 357 28.0
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 3.1e-24 117.1 179 42.5
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 8.9e-24 115.5 351 25.4
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 6.8e-16 89.4 181 35.9
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 8.4e-14 82.4 257 26.1
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 1.6e-09 68.2 276 24.6
COL.COLO4_31086 Corchorus olitorius HOM05D002504 ORTHO05D007555 5.2e-08 63.2 62 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2581 Anthoceros agrestis HOM05D002504 ORTHO05D007555 9.9e-07 58.9 176 30.1


User provided reference genes

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