Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 2.4e-47 191.8 95 100.0
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 6.1e-43 177.2 95 91.6
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 1.4e-42 176.0 95 89.5
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 5.1e-42 174.1 95 89.5
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 2.6e-41 171.8 95 88.4
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 9.7e-41 169.9 95 86.3
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 2.8e-40 168.3 95 82.1
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 2.8e-40 168.3 95 86.3
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 2.8e-40 168.3 95 86.3
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 3.7e-40 167.9 95 84.2
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 3.7e-40 167.9 95 85.3
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 6.3e-40 167.2 95 85.3
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 6.3e-40 167.2 95 83.2
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 1.4e-39 166.0 95 84.2
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 1.4e-39 166.0 95 85.3
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 2.4e-39 165.2 95 85.3
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 3.1e-39 164.9 95 84.2
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 3.1e-39 164.9 95 84.2
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 4.1e-39 164.5 95 83.2
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 5.3e-39 164.1 95 80.0
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 6.9e-39 163.7 95 84.2
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 6.9e-39 163.7 95 82.1
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 1.2e-38 162.9 95 81.1
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.5e-38 162.5 95 83.2
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 1.5e-38 162.5 95 82.1
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.0e-38 162.2 95 81.1
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.6e-38 161.8 95 82.1
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.6e-38 161.8 95 82.1
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 2.6e-38 161.8 95 82.1
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 3.4e-38 161.4 95 82.1
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 4.5e-38 161.0 95 83.2
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 5.9e-38 160.6 95 83.2
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 5.9e-38 160.6 95 82.1
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 5.9e-38 160.6 95 80.0
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 7.7e-38 160.2 95 80.0
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 7.7e-38 160.2 95 81.1
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 1.0e-37 159.8 95 82.1
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 1.3e-37 159.5 95 81.1
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.3e-37 159.5 95 80.0
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 1.3e-37 159.5 95 78.9
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 1.7e-37 159.1 95 81.1
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 1.7e-37 159.1 95 81.1
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 1.7e-37 159.1 95 80.0
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 2.9e-37 158.3 95 78.9
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 2.9e-37 158.3 95 81.1
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 3.8e-37 157.9 95 78.9
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 3.8e-37 157.9 95 77.9
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 5.0e-37 157.5 95 80.0
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 5.0e-37 157.5 95 77.9
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 6.5e-37 157.1 95 78.9
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 8.5e-37 156.8 95 76.8
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 8.5e-37 156.8 95 77.9
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.1e-36 156.4 95 75.8
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 1.1e-36 156.4 95 78.9
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 1.4e-36 156.0 95 75.8
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.4e-36 156.0 111 73.0
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.4e-36 156.0 95 80.0
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.9e-36 155.6 111 73.0
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.9e-36 155.6 95 77.9
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 2.5e-36 155.2 95 75.8
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 2.5e-36 155.2 95 75.8
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 2.5e-36 155.2 95 77.9
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 3.2e-36 154.8 95 74.7
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 4.2e-36 154.5 95 78.9
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 5.5e-36 154.1 95 74.7
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 5.5e-36 154.1 95 74.7
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 5.5e-36 154.1 95 76.8
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 5.5e-36 154.1 95 78.9
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 7.2e-36 153.7 95 74.7
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 9.4e-36 153.3 95 75.8
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 9.4e-36 153.3 95 73.7
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 9.4e-36 153.3 95 74.7
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.2e-35 152.9 95 75.8
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.2e-35 152.9 95 80.0
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-35 152.5 95 78.9
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.6e-35 152.5 111 72.1
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 2.7e-35 151.8 95 74.7
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 3.6e-35 151.4 82 90.2
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 3.6e-35 151.4 92 77.2
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.0e-34 149.8 95 73.7
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 1.4e-34 149.4 95 73.7
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.4e-34 149.4 95 72.6
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.4e-34 149.4 95 71.6
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 1.4e-34 149.4 95 78.9
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.8e-34 149.1 95 72.6
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.8e-34 149.1 95 71.6
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 3.0e-34 148.3 95 74.7
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 3.9e-34 147.9 95 74.7
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 1.1e-33 146.4 95 75.8
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 1.1e-33 146.4 95 75.8
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 1.5e-33 146.0 95 70.5
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.6e-33 145.2 95 74.7
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 2.6e-33 145.2 95 74.7
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 7.4e-33 143.7 95 70.5
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 7.4e-33 143.7 95 70.5
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 1.3e-32 142.9 82 81.7
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 2.2e-32 142.1 82 82.9
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 3.7e-32 141.4 95 70.5
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 3.7e-32 141.4 95 67.4
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 1.8e-31 139.0 95 72.6
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 2.4e-31 138.7 96 70.8
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 3.1e-31 138.3 95 66.3
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 3.1e-31 138.3 83 81.9
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 1.6e-30 136.0 95 71.6
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 3.5e-30 134.8 84 73.8
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 1.3e-29 132.9 84 73.8
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.7e-29 132.5 82 76.8
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 2.9e-29 131.7 95 66.3
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 9.7e-25 116.7 65 89.2
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 4.8e-24 114.4 93 54.8
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 1.8e-23 112.5 65 83.1
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 2.4e-23 112.1 95 55.8
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 6.5e-21 104.0 82 59.8
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 6.1e-19 97.4 95 57.9
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 5.7e-17 90.9 55 81.8
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 7.5e-17 90.5 61 77.0
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 1.0e-13 80.1 53 79.2
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 1.3e-13 79.7 47 83.0
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 6.5e-13 77.4 46 84.8
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 2.5e-12 75.5 47 80.9
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 7.2e-12 73.9 46 82.6
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 2.8e-11 72.0 46 78.3
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 6.1e-11 70.9 46 78.3
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 6.1e-11 70.9 46 78.3
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 5.2e-10 67.8 47 70.2
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 4.4e-09 64.7 46 69.6
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 1.4e-07 59.7 35 62.9
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 2.7e-06 55.5 92 28.3


User provided reference genes

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