Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p014790 Quercus lobata HOM05D001105 ORTHO05D003643 4.0e-96 354.8 179 100.0
Haze_23569 Corylus avellana HOM05D001105 ORTHO05D003643 6.8e-19 98.2 189 40.2
Cfa010179 Carpinus fangiana HOM05D001105 ORTHO05D003643 2.8e-17 92.8 186 37.6
TAR623G1713 Trochodendron aralioides HOM05D001105 ORTHO05D003643 2.8e-17 92.8 188 38.3
Gohir.A05G077900 Gossypium hirsutum HOM05D001105 ORTHO05D003643 2.4e-16 89.7 189 36.5
Cpa.g.c33086 Carica papaya HOM05D001105 ORTHO05D003643 4.1e-16 89.0 186 35.5
Eucgr.J00324 Eucalyptus grandis HOM05D001105 ORTHO05D003643 4.1e-16 89.0 171 39.2
Gohir.D05G080700 Gossypium hirsutum HOM05D001105 ORTHO05D003643 4.1e-16 89.0 183 37.7
Gorai.009G082500 Gossypium raimondii HOM05D001105 ORTHO05D003643 4.1e-16 89.0 186 37.1
MD03G1156200 Malus domestica HOM05D001105 ORTHO05D003643 4.1e-16 89.0 198 37.9
Eucgr.J00576 Eucalyptus grandis HOM05D001105 ORTHO05D003643 1.2e-15 87.4 187 36.4
ClCG03G012250 Citrullus lanatus HOM05D001105 ORTHO05D003643 1.6e-15 87.0 178 39.3
MD11G1173900 Malus domestica HOM05D001105 ORTHO05D003643 2.0e-15 86.7 194 37.6
COL.COLO4_25412 Corchorus olitorius HOM05D001105 ORTHO05D003643 2.7e-15 86.3 168 40.5
Gohir.A07G113500 Gossypium hirsutum HOM05D001105 ORTHO05D003643 4.5e-15 85.5 197 34.5
Sabra16G0127700 Salix brachista HOM05D001105 ORTHO05D003643 5.9e-15 85.1 195 35.4
MELO3C015055.2 Cucumis melo HOM05D001105 ORTHO05D003643 7.7e-15 84.7 183 37.7
Hma1.2p1_0101F.1_g049530 Hydrangea macrophylla HOM05D001105 ORTHO05D003643 7.7e-15 84.7 179 35.8
Prupe.6G145500 Prunus persica HOM05D001105 ORTHO05D003643 1.3e-14 84.0 195 35.4
VMungo1080G1577 Vigna mungo HOM05D001105 ORTHO05D003643 1.3e-14 84.0 175 36.6
Cc01_g07830 Coffea canephora HOM05D001105 ORTHO05D003643 1.7e-14 83.6 181 38.7
Potri.001G216000 Populus trichocarpa HOM05D001105 ORTHO05D003643 1.7e-14 83.6 200 35.0
Rhsim01G0200900 Rhododendron simsii HOM05D001105 ORTHO05D003643 1.7e-14 83.6 185 36.8
TWI31G0854 Tripterygium wilfordii HOM05D001105 ORTHO05D003643 2.2e-14 83.2 210 34.8
QL01p019511 Quercus lobata HOM05D001105 ORTHO05D003643 2.9e-14 82.8 196 37.8
PGR044G1104 Punica granatum HOM05D001105 ORTHO05D003643 3.8e-14 82.4 177 38.4
Ciclev10028116m.g Citrus clementina HOM05D001105 ORTHO05D003643 5.0e-14 82.0 213 35.2
CiPaw.14G094000 Carya illinoinensis HOM05D001105 ORTHO05D003643 6.5e-14 81.6 203 35.5
Gohir.D07G117200 Gossypium hirsutum HOM05D001105 ORTHO05D003643 6.5e-14 81.6 168 38.1
Duzib170G0012 Durio zibethinus HOM05D001105 ORTHO05D003643 8.5e-14 81.3 163 39.3
Potri.009G016600 Populus trichocarpa HOM05D001105 ORTHO05D003643 8.5e-14 81.3 202 33.7
Lj3g0000688 Lotus japonicus HOM05D001105 ORTHO05D003643 1.1e-13 80.9 168 38.1
THA.LOC104816974 Tarenaya hassleriana HOM05D001105 ORTHO05D003643 1.1e-13 80.9 185 34.6
CsaV3_1G043850 Cucumis sativus L. HOM05D001105 ORTHO05D003643 1.9e-13 80.1 183 36.1
Actinidia37059 Actinidia chinensis HOM05D001105 ORTHO05D003643 2.5e-13 79.7 184 38.0
CiPaw.13G128900 Carya illinoinensis HOM05D001105 ORTHO05D003643 2.5e-13 79.7 164 42.1
FAN11G1461 Fragaria x ananassa HOM05D001105 ORTHO05D003643 2.5e-13 79.7 207 31.9
Atru.chr3.3102 Acer truncatum HOM05D001105 ORTHO05D003643 3.2e-13 79.3 176 36.4
Nn6g34663 Nelumbo nucifera HOM05D001105 ORTHO05D003643 3.2e-13 79.3 156 39.7
DCAR_002708 Daucus carota HOM05D001105 ORTHO05D003643 4.2e-13 79.0 186 36.0
Manes.04G062200 Manihot esculenta HOM05D001105 ORTHO05D003643 4.2e-13 79.0 162 40.1
Phvul.005G118900 Phaseolus vulgaris HOM05D001105 ORTHO05D003643 4.2e-13 79.0 182 35.7
PGR119G1719 Punica granatum HOM05D001105 ORTHO05D003643 4.2e-13 79.0 188 35.6
Carub.0006s1973 Capsella rubella HOM05D001105 ORTHO05D003643 5.5e-13 78.6 178 36.0
Lalb_Chr03g0028441 Lupinus albus HOM05D001105 ORTHO05D003643 5.5e-13 78.6 174 37.9
TWI79G1166 Tripterygium wilfordii HOM05D001105 ORTHO05D003643 5.5e-13 78.6 165 38.2
Actinidia07280 Actinidia chinensis HOM05D001105 ORTHO05D003643 7.2e-13 78.2 161 38.5
MBI06_g47796_MAGBIO Magnolia biondii HOM05D001105 ORTHO05D003643 9.4e-13 77.8 183 37.2
Psat7g204640 Pisum sativum HOM05D001105 ORTHO05D003643 9.4e-13 77.8 208 35.6
RcHm_v2.0_Chr5g0048601 Rosa chinensis HOM05D001105 ORTHO05D003643 1.2e-12 77.4 205 32.2
VMungo1127G0292 Vigna mungo HOM05D001105 ORTHO05D003643 1.6e-12 77.0 180 36.1
Duzib150G1443 Durio zibethinus HOM05D001105 ORTHO05D003643 2.7e-12 76.3 210 33.3
Glyma.12G189300 Glycine max HOM05D001105 ORTHO05D003643 2.7e-12 76.3 169 37.3
MSTRG.18796 Avicennia marina HOM05D001105 ORTHO05D003643 4.7e-12 75.5 189 33.9
Thecc.09G271400 Theobroma cacao HOM05D001105 ORTHO05D003643 4.7e-12 75.5 151 37.7
Aqoxy1G00642 Aquilegia oxysepala HOM05D001105 ORTHO05D003643 8.0e-12 74.7 182 34.6
Gorai.001G126000 Gossypium raimondii HOM05D001105 ORTHO05D003643 8.0e-12 74.7 168 37.5
Nitab4.5_0000157g0160 Nicotiana tabacum HOM05D001105 ORTHO05D003643 8.0e-12 74.7 175 34.9
Peaxi162Scf00098g00112 Petunia axillaris HOM05D001105 ORTHO05D003643 8.0e-12 74.7 176 34.1
TPR.G4653 Trifolium pratense HOM05D001105 ORTHO05D003643 8.0e-12 74.7 197 34.5
AL6G33060 Arabidopsis lyrata HOM05D001105 ORTHO05D003643 1.0e-11 74.3 192 35.4
MBI03_g11328_MAGBIO Magnolia biondii HOM05D001105 ORTHO05D003643 1.0e-11 74.3 166 34.3
CARHR191440 Cardamine hirsuta HOM05D001105 ORTHO05D003643 1.8e-11 73.6 192 34.4
Oeu058193.2 Olea europaea HOM05D001105 ORTHO05D003643 1.8e-11 73.6 179 31.3
Sed0024938 Sechium edule HOM05D001105 ORTHO05D003643 1.8e-11 73.6 156 39.7
Nitab4.5_0001504g0090 Nicotiana tabacum HOM05D001105 ORTHO05D003643 3.0e-11 72.8 181 33.7
Ca_19474_v3 Cicer arietinum L. HOM05D001105 ORTHO05D003643 6.8e-11 71.6 185 35.1
Dinv33540 Davidia involucrata HOM05D001105 ORTHO05D003643 6.8e-11 71.6 177 33.3
Migut.D02383 Erythranthe guttata HOM05D001105 ORTHO05D003643 6.8e-11 71.6 191 31.4
Lsat_1_v5_gn_2_35160 Lactuca sativa HOM05D001105 ORTHO05D003643 8.8e-11 71.2 179 33.0
PGSC0003DMG400013130 Solanum tuberosum HOM05D001105 ORTHO05D003643 8.8e-11 71.2 178 33.1
Nitab4.5_0000875g0110 Nicotiana tabacum HOM05D001105 ORTHO05D003643 1.2e-10 70.9 188 33.5
MSTRG.21008 Avicennia marina HOM05D001105 ORTHO05D003643 1.5e-10 70.5 179 31.8
PGSC0003DMG400005904 Solanum tuberosum HOM05D001105 ORTHO05D003643 2.0e-10 70.1 171 31.6
BcaC03g13857 Brassica carinata HOM05D001105 ORTHO05D003643 2.6e-10 69.7 185 32.4
BolC2t07136H Brassica oleracea HOM05D001105 ORTHO05D003643 2.6e-10 69.7 185 32.4
Duzib168G1448 Durio zibethinus HOM05D001105 ORTHO05D003643 2.6e-10 69.7 210 31.9
THA.LOC104810935 Tarenaya hassleriana HOM05D001105 ORTHO05D003643 2.6e-10 69.7 176 34.1
Zm00001eb054430 Zea mays HOM05D001105 ORTHO05D003643 2.6e-10 69.7 175 32.0
VMungo1127G0986 Vigna mungo HOM05D001105 ORTHO05D003643 4.4e-10 68.9 181 34.8
Actinidia35484 Actinidia chinensis HOM05D001105 ORTHO05D003643 5.7e-10 68.6 142 37.3
arahy.Tifrunner.gnm1.ann1.7RX9RF Arachis hypogaea HOM05D001105 ORTHO05D003643 5.7e-10 68.6 160 35.6
TAR636G2506 Trochodendron aralioides HOM05D001105 ORTHO05D003643 5.7e-10 68.6 202 34.2
Glyma.13G312500 Glycine max HOM05D001105 ORTHO05D003643 7.5e-10 68.2 144 39.6
Dinv18846 Davidia involucrata HOM05D001105 ORTHO05D003643 9.8e-10 67.8 191 35.1
PSO717G0121 Papaver somniferum HOM05D001105 ORTHO05D003643 1.3e-09 67.4 189 32.8
PGR142G4453 Punica granatum HOM05D001105 ORTHO05D003643 1.3e-09 67.4 181 31.5
THA.LOC104799569 Tarenaya hassleriana HOM05D001105 ORTHO05D003643 1.3e-09 67.4 195 34.4
Migut.O00651 Erythranthe guttata HOM05D001105 ORTHO05D003643 1.7e-09 67.0 186 32.3
FvH4_3g26310 Fragaria vesca HOM05D001105 ORTHO05D003643 1.7e-09 67.0 169 33.1
FAN25G0372 Fragaria x ananassa HOM05D001105 ORTHO05D003643 2.2e-09 66.6 170 32.9
Lalb_Chr01g0005041 Lupinus albus HOM05D001105 ORTHO05D003643 2.2e-09 66.6 182 31.3
Nitab4.5_0008364g0020 Nicotiana tabacum HOM05D001105 ORTHO05D003643 2.2e-09 66.6 170 35.3
CSS0019741 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D003643 2.8e-09 66.2 152 35.5
CANSAT54G2833 Cannabis sativa HOM05D001105 ORTHO05D003643 2.8e-09 66.2 178 30.3
Nn2g14335 Nelumbo nucifera HOM05D001105 ORTHO05D003643 2.8e-09 66.2 155 35.5
Sp6g23100 Schrenkiella parvula HOM05D001105 ORTHO05D003643 2.8e-09 66.2 170 34.1
HPP92_004124 Vanilla planifolia HOM05D001105 ORTHO05D003643 2.8e-09 66.2 192 31.8
Phvul.011G099500 Phaseolus vulgaris HOM05D001105 ORTHO05D003643 3.7e-09 65.9 180 33.3
arahy.Tifrunner.gnm1.ann1.KL5RV2 Arachis hypogaea HOM05D001105 ORTHO05D003643 4.9e-09 65.5 201 33.3
BcaB01g04742 Brassica carinata HOM05D001105 ORTHO05D003643 4.9e-09 65.5 159 35.2
Lalb_Chr24g0393361 Lupinus albus HOM05D001105 ORTHO05D003643 4.9e-09 65.5 177 33.9
Sopen01g004760 Solanum pennellii HOM05D001105 ORTHO05D003643 4.9e-09 65.5 172 30.2
Sc21g0006780 Simmondsia chinensis HOM05D001105 ORTHO05D003643 6.3e-09 65.1 191 32.5
HPP92_019218 Vanilla planifolia HOM05D001105 ORTHO05D003643 6.3e-09 65.1 181 28.2
AT5G22090 Arabidopsis thaliana HOM05D001105 ORTHO05D003643 8.3e-09 64.7 192 32.3
BcaC01g06604 Brassica carinata HOM05D001105 ORTHO05D003643 8.3e-09 64.7 162 35.8
C03p12180 Brassica napus HOM05D001105 ORTHO05D003643 8.3e-09 64.7 162 35.8
BolC3t13692H Brassica oleracea HOM05D001105 ORTHO05D003643 8.3e-09 64.7 162 35.8
PSO675G6621 Papaver somniferum HOM05D001105 ORTHO05D003643 8.3e-09 64.7 173 33.5
FAN16G3495 Fragaria x ananassa HOM05D001105 ORTHO05D003643 1.1e-08 64.3 171 33.9
Nitab4.5_0003657g0020 Nicotiana tabacum HOM05D001105 ORTHO05D003643 1.1e-08 64.3 191 31.4
Sopen06g030340 Solanum pennellii HOM05D001105 ORTHO05D003643 1.1e-08 64.3 171 33.9
A03p10590 Brassica napus HOM05D001105 ORTHO05D003643 1.4e-08 63.9 159 35.2
FAN21G1882 Fragaria x ananassa HOM05D001105 ORTHO05D003643 1.4e-08 63.9 170 32.4
PSO675G7239 Papaver somniferum HOM05D001105 ORTHO05D003643 1.4e-08 63.9 185 32.4
Ca_01631_v3 Cicer arietinum L. HOM05D001105 ORTHO05D003643 1.8e-08 63.5 200 34.0
Solyc01g009260.1 Solanum lycopersicum HOM05D001105 ORTHO05D003643 1.8e-08 63.5 171 31.0
Solyc01g009270.1 Solanum lycopersicum HOM05D001105 ORTHO05D003643 1.8e-08 63.5 164 31.1
Oeu026358.1 Olea europaea HOM05D001105 ORTHO05D003643 2.4e-08 63.2 186 31.2
Peaxi162Scf00345g00065 Petunia axillaris HOM05D001105 ORTHO05D003643 2.4e-08 63.2 176 29.5
CAN.G1463.14 Capsicum annuum HOM05D001105 ORTHO05D003643 3.1e-08 62.8 180 32.8
CAN.G226.29 Capsicum annuum HOM05D001105 ORTHO05D003643 3.1e-08 62.8 180 33.9
CAN.G226.30 Capsicum annuum HOM05D001105 ORTHO05D003643 3.1e-08 62.8 180 33.9
Nitab4.5_0002792g0060 Nicotiana tabacum HOM05D001105 ORTHO05D003643 3.1e-08 62.8 179 34.6
PSO832G4048 Papaver somniferum HOM05D001105 ORTHO05D001870 3.1e-08 62.8 185 28.6
Hund20949 Selenicereus undatus HOM05D001105 ORTHO05D003643 3.1e-08 62.8 179 35.2
THA.LOC104800506 Tarenaya hassleriana HOM05D001105 ORTHO05D003643 4.1e-08 62.4 164 34.1
Oeu051475.1 Olea europaea HOM05D001105 ORTHO05D003643 5.4e-08 62.0 184 29.9
Psat5g260920 Pisum sativum HOM05D001105 ORTHO05D003643 5.4e-08 62.0 186 31.7
Zm00001eb216640 Zea mays HOM05D001105 ORTHO05D003643 5.4e-08 62.0 167 30.5
Sopen01g004750 Solanum pennellii HOM05D001105 ORTHO05D003643 7.0e-08 61.6 180 30.6
PGSC0003DMG400013134 Solanum tuberosum HOM05D001105 ORTHO05D003643 7.0e-08 61.6 174 31.6
HPP92_002189 Vanilla planifolia HOM05D001105 ORTHO05D003643 7.0e-08 61.6 192 31.8
ECA238G3180 Erigeron canadensis HOM05D001105 ORTHO05D003643 9.1e-08 61.2 188 30.3
Thecc.01G279800 Theobroma cacao HOM05D001105 ORTHO05D001870 9.1e-08 61.2 169 33.1
SalBow6G3058 Salvia bowleyana HOM05D001105 ORTHO05D003643 1.2e-07 60.8 168 31.0
Gohir.D09G099500 Gossypium hirsutum HOM05D001105 ORTHO05D003643 1.6e-07 60.5 168 33.9
Gorai.006G116500 Gossypium raimondii HOM05D001105 ORTHO05D003643 1.6e-07 60.5 168 33.9
CDE06G0576 Ceratophyllum demersum HOM05D001105 ORTHO05D003643 2.0e-07 60.1 178 31.5
Medtr2g087460 Medicago truncatula HOM05D001105 ORTHO05D003643 2.0e-07 60.1 190 31.6
Gohir.A09G100100 Gossypium hirsutum HOM05D001105 ORTHO05D003643 2.7e-07 59.7 168 33.9
Medtr2g087390 Medicago truncatula HOM05D001105 ORTHO05D003643 2.7e-07 59.7 175 33.7
Medtr5g005770 Medicago truncatula HOM05D001105 ORTHO05D001870 3.5e-07 59.3 180 31.1
BraA02t05637Z Brassica rapa HOM05D001105 ORTHO05D003643 5.9e-07 58.5 189 31.7
Ah.15g098960 Amaranthus hybridus HOM05D001105 ORTHO05D003643 7.7e-07 58.2 154 35.1
Duzib138G1156 Durio zibethinus HOM05D001105 ORTHO05D001870 1.0e-06 57.8 168 33.9
Glyma.12G095200 Glycine max HOM05D001105 ORTHO05D003643 1.0e-06 57.8 183 31.7
Peaxi162Scf01336g00015 Petunia axillaris HOM05D001105 ORTHO05D001870 1.0e-06 57.8 162 28.4
VMungo0720G2733 Vigna mungo HOM05D001105 ORTHO05D001870 1.0e-06 57.8 146 33.6
Lalb_Chr19g0136231 Lupinus albus HOM05D001105 ORTHO05D003643 1.3e-06 57.4 178 30.9
Peaxi162Scf00429g00042 Petunia axillaris HOM05D001105 ORTHO05D003643 1.3e-06 57.4 183 31.1
TPR.G4175 Trifolium pratense HOM05D001105 ORTHO05D003643 1.3e-06 57.4 183 32.8
Psat5g261120 Pisum sativum HOM05D001105 ORTHO05D003643 1.7e-06 57.0 179 31.3
CAN.G69.20 Capsicum annuum HOM05D001105 ORTHO05D001870 2.3e-06 56.6 167 31.1
Manes.05G076000 Manihot esculenta HOM05D001105 ORTHO05D001870 2.3e-06 56.6 183 30.1
Os03g0705800 Oryza sativa ssp. japonica HOM05D001105 ORTHO05D003643 2.3e-06 56.6 172 28.5
PSO210G4597 Papaver somniferum HOM05D001105 ORTHO05D001870 2.3e-06 56.6 187 30.5
Aqoxy5G00506 Aquilegia oxysepala HOM05D001105 ORTHO05D001870 2.9e-06 56.2 170 30.0
Duzib133G0922 Durio zibethinus HOM05D001105 ORTHO05D001870 2.9e-06 56.2 146 34.2
Phvul.007G171900 Phaseolus vulgaris HOM05D001105 ORTHO05D001870 2.9e-06 56.2 185 28.1
Gohir.D08G076000 Gossypium hirsutum HOM05D001105 ORTHO05D001870 3.8e-06 55.8 146 31.5
Gorai.004G080300 Gossypium raimondii HOM05D001105 ORTHO05D001870 3.8e-06 55.8 146 31.5
PSO717G0033 Papaver somniferum HOM05D001105 ORTHO05D003643 3.8e-06 55.8 176 31.2
Eucgr.B01102 Eucalyptus grandis HOM05D001105 ORTHO05D001870 5.0e-06 55.5 149 28.9
BraA03t10371Z Brassica rapa HOM05D001105 ORTHO05D003643 6.6e-06 55.1 154 31.8
CAN.G649.9 Capsicum annuum HOM05D001105 ORTHO05D001870 6.6e-06 55.1 151 32.5
CsaV3_6G038580 Cucumis sativus L. HOM05D001105 ORTHO05D003643 6.6e-06 55.1 157 35.7
Gorai.007G136700 Gossypium raimondii HOM05D001105 ORTHO05D001870 6.6e-06 55.1 146 32.2
Manes.03G181900 Manihot esculenta HOM05D001105 ORTHO05D001870 6.6e-06 55.1 146 31.5
Oeu048824.1 Olea europaea HOM05D001105 ORTHO05D003643 6.6e-06 55.1 178 29.2
Ciclev10021186m.g Citrus clementina HOM05D001105 ORTHO05D001870 8.6e-06 54.7 168 32.7
COL.COLO4_09100 Corchorus olitorius HOM05D001105 ORTHO05D001870 8.6e-06 54.7 146 31.5
Gohir.D11G127800 Gossypium hirsutum HOM05D001105 ORTHO05D001870 8.6e-06 54.7 146 32.2
PSO170G3767 Papaver somniferum HOM05D001105 ORTHO05D001870 8.6e-06 54.7 156 30.1


User provided reference genes

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