Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 1.5e-56 222.6 116 100.0
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 1.6e-24 116.3 113 60.2
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 1.5e-22 109.8 112 53.6
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 4.2e-22 108.2 113 55.8
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 4.2e-22 108.2 113 55.8
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 1.8e-20 102.8 114 53.5
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 9.7e-19 97.1 114 52.6
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 2.2e-18 95.9 114 52.6
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 6.3e-18 94.4 115 51.3
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 7.0e-17 90.9 109 52.3
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 7.0e-17 90.9 111 47.7
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 3.5e-16 88.6 114 50.0
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 1.3e-15 86.7 111 45.0
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 1.7e-15 86.3 115 48.7
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 6.5e-15 84.3 112 46.4
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 3.2e-14 82.0 107 47.7
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 7.2e-14 80.9 108 43.5
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 2.7e-13 79.0 108 42.6
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 5.2e-12 74.7 117 41.0
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 5.2e-12 74.7 114 50.0
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 5.7e-11 71.2 104 45.2
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 9.8e-11 70.5 110 36.4
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 1.7e-10 69.7 110 44.5
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 2.2e-10 69.3 109 45.0
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.1e-09 67.0 104 42.3
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 1.1e-09 67.0 104 42.3
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 7.0e-09 64.3 118 39.0
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 1.2e-08 63.5 97 43.3
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 3.5e-08 62.0 101 45.5
Duzib205G1360 Durio zibethinus HOM05D009197 ORTHO05D010857 5.9e-08 61.2 98 41.8
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 5.9e-08 61.2 95 38.9
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 3.8e-07 58.5 117 34.2
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 5.0e-07 58.2 123 35.8
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 1.1e-06 57.0 130 33.8
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 1.5e-06 56.6 125 33.6
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 5.5e-06 54.7 129 34.9


User provided reference genes

Program Settings