Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 0.0e+00 2095.1 1140 100.0
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 0.0e+00 1327.0 1197 64.7
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 0.0e+00 1319.7 1166 65.3
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 0.0e+00 1276.9 1130 62.6
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 0.0e+00 1077.0 1175 57.9
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 4.0e-306 1055.0 1127 55.4
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 8.2e-304 1047.3 1128 55.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.1e-303 1047.0 1129 58.5
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.2e-302 1043.5 1212 55.6
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.0e-301 1040.4 1100 53.9
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 5.0e-301 1038.1 1148 57.7
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.2e-300 1034.2 1129 54.2
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.6e-297 1025.8 1141 53.3
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.8e-296 1021.5 1090 53.3
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 4.1e-295 1018.5 1106 53.2
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.8e-293 1011.9 1180 55.1
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.9e-292 1009.6 1206 51.5
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.8e-291 1005.7 1103 52.6
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.1e-287 992.3 966 59.2
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 3.1e-287 992.3 1130 55.2
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 5.9e-286 988.0 1093 53.1
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 3.6e-283 978.8 1103 52.3
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 3.4e-281 972.2 1095 52.8
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 9.2e-279 964.1 1088 51.0
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.7e-277 959.9 1154 49.9
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.8e-274 949.9 1160 49.7
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.0e-274 948.7 1148 51.4
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 3.5e-270 935.6 1098 50.8
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 3.9e-269 932.2 1110 49.8
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.1e-268 930.6 1104 50.5
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.5e-268 930.2 1143 49.3
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.0e-265 919.8 1104 50.2
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 9.9e-265 917.5 1243 47.6
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.3e-261 907.1 933 55.8
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.6e-259 900.2 1101 49.7
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 2.8e-259 899.4 1153 48.0
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.5e-257 893.6 1147 47.8
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.3e-253 879.8 1150 47.7
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 5.6e-252 875.2 1097 51.0
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 9.6e-252 874.4 1110 48.6
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 3.6e-251 872.5 1107 48.4
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 2.0e-249 866.7 1103 48.1
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 3.8e-248 862.4 1113 48.4
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 2.4e-247 859.8 1110 51.5
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 8.7e-245 851.3 1091 47.7
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.5e-244 850.5 1118 47.4
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 1.6e-243 847.0 1114 46.9
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.6e-243 847.0 1287 43.5
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 1.5e-241 840.5 1103 48.1
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 9.9e-241 837.8 1123 46.9
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 8.4e-240 834.7 1157 46.0
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 1.2e-238 830.9 1131 46.2
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 4.6e-238 828.9 1087 47.6
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.1e-236 824.3 1091 47.5
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.1e-234 817.8 558 70.8
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.5e-233 813.9 1123 45.5
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 6.4e-232 808.5 1141 46.0
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.2e-230 804.3 1163 44.5
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.0e-229 801.2 1125 45.3
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 8.7e-229 798.1 1117 44.1
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 2.8e-227 793.1 556 69.6
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.5e-225 787.3 1131 44.4
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 2.6e-225 786.6 1092 45.1
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 2.9e-224 783.1 965 46.8
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 4.9e-224 782.3 1102 45.0
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.5e-223 780.0 1083 45.0
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.5e-223 780.0 1100 44.3
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 5.1e-221 772.3 1118 43.8
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.5e-220 770.0 931 46.9
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 9.7e-220 768.1 1137 43.4
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 6.3e-219 765.4 1103 44.3
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 2.4e-218 763.5 1012 46.1
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 5.9e-217 758.8 1096 44.2
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.3e-216 757.7 1103 43.4
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.1e-215 754.6 1113 45.0
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 4.2e-215 752.7 1129 43.5
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 4.6e-214 749.2 1144 44.0
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.8e-213 747.3 1120 42.8
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 3.0e-213 746.5 1005 46.5
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 3.9e-213 746.1 1119 43.2
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.3e-212 743.0 1138 43.7
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.4e-210 737.6 1103 42.2
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 4.5e-209 732.6 1086 42.8
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 7.7e-209 731.9 758 53.4
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.9e-208 729.9 1013 45.5
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 2.5e-207 726.9 873 47.8
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.5e-207 726.9 1092 42.2
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.2e-206 724.5 940 47.7
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 1.6e-206 724.2 1093 41.9
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.6e-206 724.2 1091 42.0
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-204 717.6 1014 45.1
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.9e-199 700.7 1120 44.8
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 9.4e-199 698.4 996 45.3
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 2.0e-193 680.6 1197 39.8
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.3e-192 677.9 951 43.8
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.5e-188 664.5 1096 40.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.4e-186 657.9 1153 42.2
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 3.0e-181 640.2 570 56.3
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 5.7e-180 636.0 1059 39.4
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 5.9e-177 625.9 1047 40.1
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 2.3e-160 570.9 921 42.7
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.6e-152 542.3 505 57.6
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.4e-146 524.2 1144 35.0
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 4.9e-139 500.0 311 76.8
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 3.3e-135 487.3 740 38.6
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 3.3e-135 487.3 455 54.9
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 6.2e-134 483.0 860 39.4
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 7.1e-130 469.5 903 40.3
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.3e-123 448.7 614 41.5
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 8.4e-123 446.0 681 40.8
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.3e-120 438.7 791 37.7
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.3e-118 432.2 504 43.8
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.5e-114 417.9 644 40.2
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.0e-92 345.1 736 38.3
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 3.6e-81 307.8 226 70.8
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 8.5e-75 286.6 729 33.9
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.9e-74 285.4 220 63.2
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.8e-69 268.9 736 31.7
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 5.4e-37 161.0 281 37.4
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 1.9e-29 136.0 618 29.1
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 3.2e-21 108.6 80 67.5
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.7e-20 105.5 586 27.5
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 1.5e-18 99.8 87 54.0
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.9e-18 99.4 208 31.7
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.3e-18 98.2 165 41.8
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 1.6e-17 96.3 80 60.0
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 1.4e-16 93.2 87 52.9
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 2.4e-16 92.4 57 68.4
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 5.3e-16 91.3 49 79.6
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 7.6e-15 87.4 53 71.7
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.4e-13 82.4 148 40.5
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.6e-10 71.2 129 48.1


User provided reference genes

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