Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p010661 Quercus lobata HOM05D000119 ORTHO05D000054 3.6e-48 194.5 94 100.0
QL10p010666 Quercus lobata HOM05D000119 ORTHO05D000054 7.8e-43 176.8 91 96.7
QL10p011091 Quercus lobata HOM05D000119 ORTHO05D000054 7.1e-36 153.7 78 94.9
Haze_07511 Corylus avellana HOM05D000119 ORTHO05D000054 1.1e-25 119.8 76 81.6
Cfa019145 Carpinus fangiana HOM05D000119 ORTHO05D000054 4.0e-23 111.3 76 77.6
CiPaw.11G025200 Carya illinoinensis HOM05D000119 ORTHO05D000054 7.1e-20 100.5 78 65.4
Lalb_Chr13g0297751 Lupinus albus HOM05D000119 ORTHO05D000054 1.5e-14 82.8 75 58.7
Psat4g057560 Pisum sativum HOM05D000119 ORTHO05D000054 2.0e-14 82.4 84 57.1
GSVIVG01007731001 Vitis vinifera HOM05D000119 ORTHO05D000054 1.7e-13 79.3 76 57.9
TPR.G37462 Trifolium pratense HOM05D000119 ORTHO05D000054 4.2e-12 74.7 81 56.8
CSS0017358 Camellia sinensis var. sinensis HOM05D000119 ORTHO05D000054 9.4e-12 73.6 71 56.3
VMungo1215G0738 Vigna mungo HOM05D000119 ORTHO05D000054 9.4e-12 73.6 77 50.6
Glyma.17G088600 Glycine max HOM05D000119 ORTHO05D000054 7.9e-11 70.5 79 50.6
CiPaw.12G027200 Carya illinoinensis HOM05D000119 ORTHO05D000054 3.9e-10 68.2 61 62.3
TAR371G0936 Trochodendron aralioides HOM05D000119 ORTHO05D000054 5.1e-10 67.8 62 53.2
MD14G1179000 Malus domestica HOM05D000119 ORTHO05D000054 6.7e-10 67.4 83 51.8
Hma1.2p1_2469F.1_g322710 Hydrangea macrophylla HOM05D000119 ORTHO05D000054 1.1e-09 66.6 76 46.1
CSS0028032 Camellia sinensis var. sinensis HOM05D000119 ORTHO05D000054 4.3e-09 64.7 72 54.2
Duzib068G0134 Durio zibethinus HOM05D000119 ORTHO05D000054 4.3e-09 64.7 80 53.8
Glyma.05G038500 Glycine max HOM05D000119 ORTHO05D000054 4.3e-09 64.7 63 55.6
Phvul.003G201300 Phaseolus vulgaris HOM05D000119 ORTHO05D000054 4.3e-09 64.7 62 53.2
Atru.chr9.2488 Acer truncatum HOM05D000119 ORTHO05D000054 2.2e-08 62.4 84 48.8
MD06G1172900 Malus domestica HOM05D000119 ORTHO05D000054 4.8e-08 61.2 79 49.4
Prupe.5G172400 Prunus persica HOM05D000119 ORTHO05D000054 6.3e-08 60.8 55 58.2
Lalb_Chr12g0201631 Lupinus albus HOM05D000119 ORTHO05D000054 1.1e-07 60.1 76 46.1
Sed0000510 Sechium edule HOM05D000119 ORTHO05D000054 2.4e-07 58.9 75 44.0
FvH4_5g05420 Fragaria vesca HOM05D000119 ORTHO05D000054 9.1e-07 57.0 94 45.7
FAN18G2106 Fragaria x ananassa HOM05D000119 ORTHO05D000054 9.1e-07 57.0 94 45.7
Nn8g39357 Nelumbo nucifera HOM05D000119 ORTHO05D000054 9.1e-07 57.0 62 45.2
FAN13G0934 Fragaria x ananassa HOM05D000119 ORTHO05D000054 1.2e-06 56.6 86 48.8
Lj4g0016543 Lotus japonicus HOM05D000119 ORTHO05D000054 1.2e-06 56.6 51 56.9
THA.LOC104808391 Tarenaya hassleriana HOM05D000119 ORTHO05D000054 1.2e-06 56.6 69 47.8
FAN18G2311 Fragaria x ananassa HOM05D000119 ORTHO05D000054 1.5e-06 56.2 94 46.8
Cpa.g.sc76.38 Carica papaya HOM05D000119 ORTHO05D000054 2.0e-06 55.8 65 53.8
COL.COLO4_30059 Corchorus olitorius HOM05D000119 ORTHO05D000054 2.0e-06 55.8 76 47.4
FAN04G3146 Fragaria x ananassa HOM05D000119 ORTHO05D000054 2.0e-06 55.8 96 43.8
Lalb_Chr23g0273261 Lupinus albus HOM05D000119 ORTHO05D000054 3.4e-06 55.1 54 50.0
Sabra15G0102300 Salix brachista HOM05D000119 ORTHO05D000054 4.5e-06 54.7 76 52.6
FAN08G1764 Fragaria x ananassa HOM05D000119 ORTHO05D000054 5.9e-06 54.3 86 48.8


User provided reference genes

Program Settings