Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p010166 Quercus lobata HOM05D002875 ORTHO05D003215 2.0e-298 1028.5 568 100.0
QL10p009041 Quercus lobata HOM05D002875 ORTHO05D003215 4.2e-139 499.2 1261 36.3
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 1.5e-72 278.1 754 39.0
QL10p009141 Quercus lobata HOM05D002875 ORTHO05D003215 6.4e-31 139.8 690 29.3
QL10p009349 Quercus lobata HOM05D002875 ORTHO05D003215 7.9e-29 132.9 560 31.4
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 8.1e-26 122.9 551 29.8
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 3.1e-25 120.9 113 58.4
QL10p010212 Quercus lobata HOM05D002875 ORTHO05D337491 2.0e-24 118.2 126 70.6
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 5.8e-24 116.7 114 58.8
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 7.6e-24 116.3 115 57.4
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 1.3e-23 115.5 639 29.1
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 4.9e-23 113.6 118 51.7
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 8.4e-23 112.8 113 55.8
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 1.9e-22 111.7 106 61.3
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.9e-22 111.7 116 56.0
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 5.4e-22 110.2 116 55.2
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 7.1e-22 109.8 116 53.4
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 2.7e-21 107.8 117 52.1
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 1.0e-20 105.9 117 51.3
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 1.3e-20 105.5 134 47.0
Nitab4.5_0003229g0110 Nicotiana tabacum HOM05D002875 ORTHO05D003215 2.3e-20 104.8 117 53.8
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 3.9e-20 104.0 116 54.3
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 6.7e-20 103.2 133 46.6
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 8.7e-20 102.8 114 49.1
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 8.7e-20 102.8 116 54.3
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.1e-19 102.4 114 50.0
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 1.1e-19 102.4 114 48.2
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 1.9e-19 101.7 134 47.0
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 1.9e-19 101.7 118 52.5
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 1.9e-19 101.7 134 47.8
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 3.3e-19 100.9 117 48.7
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 4.3e-19 100.5 116 52.6
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 7.4e-19 99.8 114 49.1
QL10p009301 Quercus lobata HOM05D002875 ORTHO05D003215 9.6e-19 99.4 506 29.1
CAN.G1166.11 Capsicum annuum HOM05D002875 ORTHO05D003215 2.1e-18 98.2 116 49.1
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 2.1e-18 98.2 116 49.1
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 2.1e-18 98.2 134 47.0
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 8.1e-18 96.3 117 48.7
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 1.1e-17 95.9 117 48.7
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 1.4e-17 95.5 116 45.7
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 2.4e-17 94.7 117 45.3
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 4.0e-17 94.0 636 26.4
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 5.3e-17 93.6 117 47.9
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 6.9e-17 93.2 109 49.5
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 9.0e-17 92.8 112 50.0
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 2.6e-16 91.3 121 46.3
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 7.6e-16 89.7 132 43.9
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 3.8e-15 87.4 114 48.2
QL10p009914 Quercus lobata HOM05D002875 ORTHO05D003215 1.1e-14 85.9 445 29.0
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 1.4e-14 85.5 114 43.9
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.4e-14 85.5 132 41.7
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 1.4e-14 85.5 114 48.2
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 1.9e-14 85.1 114 47.4
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 1.9e-14 85.1 132 41.7
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.9e-14 85.1 132 41.7
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 1.9e-14 85.1 121 45.5
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 3.2e-14 84.3 112 44.6
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 2.1e-13 81.6 111 45.0
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 2.1e-13 81.6 144 38.9
Hma1.2p1_0149F.1_g066580 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 2.7e-13 81.3 129 42.6
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 3.5e-13 80.9 112 44.6
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 6.0e-13 80.1 107 47.7
Hma1.2p1_0149F.1_g066560 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 6.0e-13 80.1 122 44.3
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 7.9e-13 79.7 114 46.5
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 7.9e-13 79.7 107 47.7
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 7.9e-13 79.7 131 40.5
QL10p010123 Quercus lobata HOM05D002875 ORTHO05D003215 1.0e-12 79.3 489 26.0
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 1.0e-12 79.3 130 43.1
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 1.8e-12 78.6 129 44.2
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 2.3e-12 78.2 115 40.0
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 2.3e-12 78.2 115 40.0
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 2.3e-12 78.2 102 50.0
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 3.0e-12 77.8 99 48.5
Sc04g0001700 Simmondsia chinensis HOM05D002875 ORTHO05D003215 3.0e-12 77.8 130 44.6
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 3.9e-12 77.4 113 39.8
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 3.9e-12 77.4 116 41.4
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 3.9e-12 77.4 107 46.7
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 3.9e-12 77.4 107 46.7
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 8.7e-12 76.3 113 42.5
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 8.7e-12 76.3 96 49.0
Ah.11g051480 Amaranthus hybridus HOM05D002875 ORTHO05D003215 1.1e-11 75.9 109 39.4
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 1.1e-11 75.9 136 36.8
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 1.1e-11 75.9 124 38.7
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 1.1e-11 75.9 130 42.3
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 1.1e-11 75.9 637 26.5
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 1.5e-11 75.5 111 42.3
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.9e-11 75.1 110 40.9
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 1.9e-11 75.1 115 43.5
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 2.5e-11 74.7 124 38.7
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 3.3e-11 74.3 120 39.2
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 3.3e-11 74.3 107 42.1
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 3.3e-11 74.3 111 37.8
TPR.G17138 Trifolium pratense HOM05D002875 ORTHO05D003215 3.3e-11 74.3 106 42.5
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 3.3e-11 74.3 99 46.5
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 5.7e-11 73.6 100 47.0
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 5.7e-11 73.6 115 42.6
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 7.4e-11 73.2 117 43.6
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 9.6e-11 72.8 113 42.5
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 1.3e-10 72.4 99 45.5
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 1.6e-10 72.0 124 37.1
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 2.8e-10 71.2 106 43.4
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 2.8e-10 71.2 113 39.8
QL10p009338 Quercus lobata HOM05D002875 ORTHO05D003215 3.7e-10 70.9 158 36.1
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 4.8e-10 70.5 124 37.1
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 4.8e-10 70.5 120 37.5
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 4.8e-10 70.5 120 37.5
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 4.8e-10 70.5 120 37.5
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 6.2e-10 70.1 106 46.2
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 8.2e-10 69.7 107 43.0
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.1e-09 69.3 110 39.1
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 1.4e-09 68.9 120 36.7
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 1.4e-09 68.9 120 36.7
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 2.4e-09 68.2 117 40.2
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 6.9e-09 66.6 126 36.5
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 1.5e-08 65.5 90 47.8
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 1.5e-08 65.5 110 38.2
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 5.5e-06 57.0 641 24.2
QL10p009343 Quercus lobata HOM05D002875 ORTHO05D003215 7.1e-06 56.6 42 81.0


User provided reference genes

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