Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p010036 Quercus lobata HOM05D002875 ORTHO05D003215 3.7e-172 608.2 328 100.0
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 9.5e-112 407.5 282 85.8
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 8.1e-95 351.3 274 72.3
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 5.8e-85 318.5 289 70.9
QL10p010210 Quercus lobata HOM05D002875 ORTHO05D003215 7.6e-85 318.2 289 70.6
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 9.9e-85 317.8 284 71.5
QL10p008968 Quercus lobata HOM05D002875 ORTHO05D003215 2.9e-60 236.5 311 50.8
QL10p010250 Quercus lobata HOM05D002875 ORTHO05D003215 4.2e-59 232.6 274 59.5
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 6.5e-52 208.8 292 48.6
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 1.8e-49 200.7 248 50.4
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 2.3e-49 200.3 246 51.2
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 3.0e-49 199.9 241 50.6
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 8.8e-49 198.4 285 44.6
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.5e-48 197.6 245 48.6
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 3.3e-48 196.4 291 46.0
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 9.7e-48 194.9 250 47.6
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 1.7e-47 194.1 283 44.9
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 2.8e-47 193.4 250 47.2
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 4.8e-47 192.6 294 44.2
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.4e-46 191.0 250 46.8
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 1.4e-46 191.0 245 47.8
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 5.3e-46 189.1 294 42.5
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 7.0e-46 188.7 240 48.3
Cpa.g.sc76.34 Carica papaya HOM05D002875 ORTHO05D003215 1.2e-45 188.0 287 43.9
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 1.2e-45 188.0 245 48.6
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.6e-45 187.6 285 44.2
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 2.6e-45 186.8 295 42.7
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 3.5e-45 186.4 284 42.6
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 5.9e-45 185.7 245 47.8
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 1.0e-44 184.9 270 43.3
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 1.0e-44 184.9 294 42.5
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 1.3e-44 184.5 283 44.9
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 1.7e-44 184.1 284 42.3
Sc04g0001700 Simmondsia chinensis HOM05D002875 ORTHO05D003215 1.7e-44 184.1 247 44.1
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 2.9e-44 183.3 252 46.8
QL10p009301 Quercus lobata HOM05D002875 ORTHO05D003215 3.8e-44 183.0 225 49.8
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 6.5e-44 182.2 245 46.1
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 1.1e-43 181.4 284 43.7
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 1.1e-43 181.4 240 46.7
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 1.1e-43 181.4 284 41.9
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 1.9e-43 180.6 284 41.2
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 2.5e-43 180.3 297 41.1
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 2.5e-43 180.3 293 41.3
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 7.2e-43 178.7 292 43.2
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.2e-42 177.9 247 47.0
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.2e-42 177.9 246 43.9
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 1.2e-42 177.9 249 45.4
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 1.6e-42 177.6 284 42.6
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 2.7e-42 176.8 251 45.0
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 2.7e-42 176.8 288 42.4
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 3.6e-42 176.4 290 43.4
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 3.6e-42 176.4 247 43.7
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 4.7e-42 176.0 243 45.3
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 6.1e-42 175.6 250 44.0
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 6.1e-42 175.6 244 45.5
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 1.0e-41 174.9 284 41.9
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.0e-41 174.9 247 46.6
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 1.0e-41 174.9 248 44.0
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 1.4e-41 174.5 284 40.1
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.8e-41 174.1 247 44.5
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 2.3e-41 173.7 252 42.5
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 3.0e-41 173.3 292 41.4
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 3.0e-41 173.3 283 40.6
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 3.0e-41 173.3 274 43.1
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 4.0e-41 172.9 247 45.7
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 4.0e-41 172.9 285 41.8
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 4.0e-41 172.9 282 41.1
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 6.7e-41 172.2 293 40.3
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 8.8e-41 171.8 283 40.3
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 2.6e-40 170.2 287 39.7
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 3.3e-40 169.9 240 44.2
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 4.4e-40 169.5 281 40.6
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 5.7e-40 169.1 287 39.4
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 5.7e-40 169.1 287 39.4
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 5.7e-40 169.1 239 43.1
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 7.5e-40 168.7 287 39.4
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 7.5e-40 168.7 287 39.4
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 7.5e-40 168.7 259 40.5
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 1.3e-39 167.9 268 40.7
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 1.3e-39 167.9 283 39.9
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 1.3e-39 167.9 190 49.5
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 2.2e-39 167.2 246 42.7
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 3.7e-39 166.4 290 40.0
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 4.8e-39 166.0 287 39.7
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 6.3e-39 165.6 286 38.8
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 8.2e-39 165.2 247 44.5
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.8e-38 164.1 247 44.1
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 2.4e-38 163.7 247 44.1
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 5.3e-38 162.5 257 40.1
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 1.6e-37 161.0 287 38.0
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 4.5e-37 159.5 286 39.2
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 4.5e-37 159.5 247 40.9
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 5.9e-37 159.1 193 48.2
QL10p009914 Quercus lobata HOM05D002875 ORTHO05D003215 5.9e-37 159.1 193 48.7
QL10p009141 Quercus lobata HOM05D002875 ORTHO05D003215 7.7e-37 158.7 220 45.9
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 1.0e-36 158.3 286 39.2
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 1.3e-36 157.9 246 41.1
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 1.3e-36 157.9 281 38.1
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 1.7e-36 157.5 245 42.0
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 1.7e-36 157.5 251 39.8
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 5.0e-36 156.0 245 42.0
QL10p010123 Quercus lobata HOM05D002875 ORTHO05D003215 6.5e-36 155.6 193 47.7
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 8.5e-36 155.2 284 37.3
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 1.5e-35 154.5 246 39.4
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 1.0e-33 148.3 286 37.4
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 1.0e-33 148.3 286 37.4
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 1.2e-32 144.8 286 37.1
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 1.5e-32 144.4 248 39.5
QL10p009338 Quercus lobata HOM05D002875 ORTHO05D003215 7.5e-32 142.1 189 46.0
Atru.chr9.2505 Acer truncatum HOM05D002875 ORTHO05D003215 9.8e-32 141.7 216 44.0
Hma1.2p1_0660F.1_g197790 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 1.7e-31 141.0 236 43.2
TPR.G17138 Trifolium pratense HOM05D002875 ORTHO05D003215 4.8e-31 139.4 205 46.8
QL10p009349 Quercus lobata HOM05D002875 ORTHO05D003215 6.3e-31 139.0 193 44.6
QL06p021162 Quercus lobata HOM05D002875 ORTHO05D003215 2.0e-29 134.0 155 50.3
Os05g0594500 Oryza sativa ssp. japonica HOM05D002875 ORTHO05D003215 2.7e-29 133.7 249 37.8
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 1.0e-28 131.7 239 38.1
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 8.5e-28 128.6 274 33.2
Hma1.2p1_0149F.1_g066560 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 4.5e-21 106.3 174 42.0
TPR.G28903 Trifolium pratense HOM05D002875 ORTHO05D003215 1.1e-19 101.7 154 44.2
Zm00001eb345460 Zea mays HOM05D002875 ORTHO05D003215 1.1e-19 101.7 256 31.6
Hma1.2p1_0149F.1_g066580 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 1.6e-18 97.8 193 38.3
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 1.8e-17 94.4 284 29.2
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 9.2e-14 82.0 143 42.0
QL10p009041 Quercus lobata HOM05D002875 ORTHO05D003215 2.3e-12 77.4 222 30.2
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 7.3e-11 72.4 137 37.2
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 1.0e-09 68.6 256 26.2
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 3.1e-09 67.0 185 29.2
QL02p071336 Quercus lobata HOM05D002875 ORTHO05D003215 9.8e-08 62.0 229 24.9
AagrBONN_evm.TU.Sc2ySwM_228.3556 Anthoceros agrestis HOM05D002875 ORTHO05D003215 2.2e-07 60.8 223 28.3
SMO343G0006 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 4.9e-07 59.7 238 23.9
CiPaw.03G055700 Carya illinoinensis HOM05D002875 ORTHO05D003215 6.4e-07 59.3 270 24.4
GSVIVG01033091001 Vitis vinifera HOM05D002875 ORTHO05D003215 1.1e-06 58.5 261 24.1
COL.COLO4_13262 Corchorus olitorius HOM05D002875 ORTHO05D003215 2.4e-06 57.4 225 24.0
FvH4_6g53530 Fragaria vesca HOM05D002875 ORTHO05D003215 2.4e-06 57.4 249 24.9
Pp3c9_12560 Physcomitrium patens HOM05D002875 ORTHO05D003215 2.4e-06 57.4 269 25.7
PSO478G3098 Papaver somniferum HOM05D002875 ORTHO05D003215 3.2e-06 57.0 131 34.4
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 3.2e-06 57.0 221 25.3
Duzib187G1197 Durio zibethinus HOM05D002875 ORTHO05D003215 5.4e-06 56.2 225 25.3
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 5.4e-06 56.2 249 24.5
SEGI_08382 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 5.4e-06 56.2 130 33.1
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 9.2e-06 55.5 273 24.9
Lalb_Chr14g0363441 Lupinus albus HOM05D002875 ORTHO05D003215 9.2e-06 55.5 252 21.8
Pp3c9_870 Physcomitrium patens HOM05D002875 ORTHO05D003215 9.2e-06 55.5 174 27.6


User provided reference genes

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