Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p009415 Quercus lobata HOM05D002875 ORTHO05D003215 1.4e-67 259.6 141 100.0
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 8.2e-36 154.1 92 88.0
QL10p010194 Quercus lobata HOM05D002875 ORTHO05D003215 4.8e-28 128.3 93 73.1
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 1.4e-27 126.7 103 68.0
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 1.8e-27 126.3 92 72.8
QL10p010243 Quercus lobata HOM05D002875 ORTHO05D003215 7.7e-26 120.9 104 65.4
QL10p008975 Quercus lobata HOM05D002875 ORTHO05D003215 7.2e-24 114.4 94 67.0
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 3.9e-22 108.6 103 60.2
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 6.3e-20 101.3 64 78.1
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 5.3e-19 98.2 108 55.6
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.0e-17 94.0 103 54.4
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 3.8e-17 92.0 111 54.1
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 8.5e-17 90.9 95 51.6
QL10p010118 Quercus lobata HOM05D002875 ORTHO05D003215 1.4e-16 90.1 98 59.2
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 3.2e-16 89.0 103 51.5
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 5.5e-16 88.2 91 54.9
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 7.2e-16 87.8 104 54.8
Nitab4.5_0003229g0110 Nicotiana tabacum HOM05D002875 ORTHO05D003215 7.2e-16 87.8 91 54.9
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 9.4e-16 87.4 97 57.7
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 1.2e-15 87.0 106 52.8
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 1.6e-15 86.7 85 55.3
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.1e-15 86.3 108 48.1
QL10p009141 Quercus lobata HOM05D002875 ORTHO05D003215 2.1e-15 86.3 97 57.7
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 2.7e-15 85.9 94 51.1
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 3.6e-15 85.5 85 54.1
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 3.6e-15 85.5 104 49.0
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 4.7e-15 85.1 85 52.9
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 7.9e-15 84.3 102 48.0
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 7.9e-15 84.3 107 49.5
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 1.0e-14 84.0 103 47.6
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 1.0e-14 84.0 104 51.9
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 1.0e-14 84.0 102 48.0
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.4e-14 83.6 102 48.0
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.8e-14 83.2 102 48.0
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 1.8e-14 83.2 102 48.0
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 2.3e-14 82.8 106 50.0
CAN.G1166.11 Capsicum annuum HOM05D002875 ORTHO05D003215 3.0e-14 82.4 91 51.6
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 3.0e-14 82.4 91 51.6
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 3.0e-14 82.4 94 54.3
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 3.0e-14 82.4 103 47.6
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 3.0e-14 82.4 102 46.1
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 3.0e-14 82.4 91 51.6
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 3.9e-14 82.0 107 47.7
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 3.9e-14 82.0 91 52.7
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 5.2e-14 81.6 104 48.1
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 5.2e-14 81.6 113 46.9
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 5.2e-14 81.6 107 45.8
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 5.2e-14 81.6 106 48.1
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 5.2e-14 81.6 91 52.7
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 5.2e-14 81.6 91 51.6
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 5.2e-14 81.6 95 47.4
QL10p009041 Quercus lobata HOM05D002875 ORTHO05D003215 6.7e-14 81.3 105 52.4
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 8.8e-14 80.9 94 51.1
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 8.8e-14 80.9 104 46.2
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 1.5e-13 80.1 98 46.9
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 1.5e-13 80.1 104 46.2
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.6e-13 79.3 91 50.5
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 2.6e-13 79.3 98 48.0
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 3.3e-13 79.0 106 48.1
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 3.3e-13 79.0 104 47.1
QL10p009349 Quercus lobata HOM05D002875 ORTHO05D003215 3.3e-13 79.0 106 52.8
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 4.4e-13 78.6 102 46.1
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 5.7e-13 78.2 107 47.7
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 5.7e-13 78.2 107 47.7
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 5.7e-13 78.2 104 45.2
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 7.4e-13 77.8 85 49.4
QL10p009343 Quercus lobata HOM05D002875 ORTHO05D003215 9.7e-13 77.4 96 52.1
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 1.7e-12 76.6 96 46.9
TPR.G17138 Trifolium pratense HOM05D002875 ORTHO05D003215 1.7e-12 76.6 85 49.4
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 2.2e-12 76.3 104 50.0
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 2.8e-12 75.9 85 49.4
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 6.3e-12 74.7 89 46.1
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 8.2e-12 74.3 85 51.8
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 1.1e-11 73.9 110 43.6
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 1.1e-11 73.9 110 44.5
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 1.4e-11 73.6 91 45.1
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 1.4e-11 73.6 89 44.9
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 1.4e-11 73.6 103 44.7
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 1.4e-11 73.6 85 50.6
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 1.8e-11 73.2 89 44.9
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 2.4e-11 72.8 85 50.6
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 3.1e-11 72.4 110 43.6
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 4.1e-11 72.0 104 45.2
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 4.1e-11 72.0 102 40.2
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 5.3e-11 71.6 99 46.5
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 7.0e-11 71.2 110 42.7
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 9.1e-11 70.9 104 44.2
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 9.1e-11 70.9 110 42.7
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 1.2e-10 70.5 96 45.8
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 1.2e-10 70.5 110 43.6
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 1.2e-10 70.5 110 43.6
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 1.2e-10 70.5 110 43.6
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 1.6e-10 70.1 103 39.8
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 2.6e-10 69.3 110 42.7
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 2.6e-10 69.3 93 38.7
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 4.5e-10 68.6 110 41.8
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 4.5e-10 68.6 110 41.8
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 4.5e-10 68.6 94 40.4
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 5.9e-10 68.2 108 45.4
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 5.9e-10 68.2 110 42.7
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 5.9e-10 68.2 104 39.4
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 5.9e-10 68.2 112 38.4
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.0e-09 67.4 84 50.0
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 2.2e-09 66.2 102 40.2
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 2.2e-09 66.2 95 44.2
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 2.9e-09 65.9 82 41.5
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 5.0e-09 65.1 91 41.8
Ah.11g051480 Amaranthus hybridus HOM05D002875 ORTHO05D003215 8.5e-09 64.3 98 39.8
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 8.5e-09 64.3 95 41.1
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.5e-08 63.5 78 52.6
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 1.5e-08 63.5 102 35.3
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 4.2e-08 62.0 105 38.1
Hma1.2p1_0149F.1_g066560 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 7.2e-08 61.2 96 41.7
Hma1.2p1_0149F.1_g066580 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 9.4e-08 60.8 96 41.7
Potri.001G330000 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.7e-07 59.3 87 35.6
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 6.1e-07 58.2 107 40.2
Haze_03110 Corylus avellana HOM05D002875 ORTHO05D003215 8.0e-07 57.8 86 37.2
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 1.0e-06 57.4 91 37.4
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 1.4e-06 57.0 104 39.4
Cfa010845 Carpinus fangiana HOM05D002875 ORTHO05D003215 2.3e-06 56.2 89 34.8
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 3.0e-06 55.8 75 36.0
THA.LOC104823982 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 4.0e-06 55.5 100 35.0
Mapoly0015s0063 Marchantia polymorpha HOM05D002875 ORTHO05D003215 6.7e-06 54.7 83 39.8
Actinidia04438 Actinidia chinensis HOM05D002875 ORTHO05D003215 8.8e-06 54.3 101 31.7
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 8.8e-06 54.3 114 28.9


User provided reference genes

Program Settings