Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p009372 Quercus lobata HOM05D002875 ORTHO05D003215 3.5e-77 291.6 150 100.0
QL10p009146 Quercus lobata HOM05D002875 ORTHO05D003215 1.1e-65 253.4 132 97.7
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 2.7e-61 238.8 132 90.2
QL10p010118 Quercus lobata HOM05D002875 ORTHO05D003215 3.0e-60 235.3 132 88.6
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 5.6e-59 231.1 132 87.9
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 5.6e-59 231.1 132 87.9
QL10p009307 Quercus lobata HOM05D002875 ORTHO05D003215 6.2e-58 227.6 132 87.9
QL10p008975 Quercus lobata HOM05D002875 ORTHO05D003215 3.9e-52 208.4 121 86.0
QL10p010243 Quercus lobata HOM05D002875 ORTHO05D003215 6.6e-52 207.6 121 85.1
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 9.6e-51 203.8 121 84.3
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 3.2e-46 188.7 121 79.3
QL10p010194 Quercus lobata HOM05D002875 ORTHO05D003215 3.2e-46 188.7 121 79.3
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 1.6e-45 186.4 132 78.0
QL10p009910 Quercus lobata HOM05D002875 ORTHO05D003215 1.0e-44 183.7 121 80.2
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 1.8e-41 172.9 121 75.2
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 2.3e-36 156.0 132 64.4
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 3.7e-34 148.7 122 63.9
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 2.4e-33 146.0 121 63.6
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 3.4e-32 142.1 123 64.2
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 1.3e-31 140.2 121 62.8
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 6.4e-31 137.9 123 62.6
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 1.9e-30 136.3 126 57.1
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 5.5e-30 134.8 122 59.8
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 1.2e-29 133.7 121 58.7
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.6e-29 133.3 122 58.2
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 2.1e-29 132.9 121 56.2
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 2.1e-29 132.9 121 56.2
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 2.1e-29 132.9 121 56.2
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 3.5e-29 132.1 122 57.4
FAN18G3563 Fragaria x ananassa HOM05D002875 ORTHO05D003215 3.5e-29 132.1 122 57.4
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 3.5e-29 132.1 122 57.4
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 4.6e-29 131.7 122 58.2
QL10p009421 Quercus lobata HOM05D002875 ORTHO05D003215 4.6e-29 131.7 81 86.4
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 6.0e-29 131.3 126 58.7
FAN08G3091 Fragaria x ananassa HOM05D002875 ORTHO05D003215 7.9e-29 131.0 122 58.2
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.3e-28 129.4 122 55.7
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 2.3e-28 129.4 123 56.1
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 2.3e-28 129.4 122 59.0
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 6.7e-28 127.9 128 57.0
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 2.5e-27 125.9 128 53.1
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 4.3e-27 125.2 128 53.1
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 4.3e-27 125.2 133 50.4
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 1.6e-26 123.2 122 54.9
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 2.1e-26 122.9 93 62.4
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 4.8e-26 121.7 123 53.7
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 6.2e-26 121.3 122 55.7
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.8e-25 119.8 113 53.1
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 1.8e-25 119.8 122 53.3
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 2.4e-25 119.4 121 57.0
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 2.4e-25 119.4 122 52.5
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 9.0e-25 117.5 113 52.2
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.5e-24 116.7 125 52.8
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 1.5e-24 116.7 121 53.7
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.6e-24 115.9 125 52.8
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 3.4e-24 115.5 122 50.0
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 3.4e-24 115.5 123 56.1
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 4.5e-24 115.2 100 56.0
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 7.6e-24 114.4 122 51.6
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 1.0e-23 114.0 121 52.1
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 2.2e-23 112.8 123 51.2
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 2.9e-23 112.5 122 51.6
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 2.9e-23 112.5 123 52.8
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 3.8e-23 112.1 123 49.6
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 8.4e-23 110.9 122 49.2
TPR.G14262 Trifolium pratense HOM05D002875 ORTHO05D003215 1.1e-22 110.5 128 48.4
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 1.4e-22 110.2 129 48.1
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 1.4e-22 110.2 123 52.0
Atru.chr9.2509 Acer truncatum HOM05D002875 ORTHO05D003215 9.3e-22 107.5 121 52.1
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 9.3e-22 107.5 121 47.9
Nitab4.5_0003229g0110 Nicotiana tabacum HOM05D002875 ORTHO05D003215 1.2e-21 107.1 123 52.0
CAN.G1166.11 Capsicum annuum HOM05D002875 ORTHO05D003215 2.1e-21 106.3 118 47.5
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 2.1e-21 106.3 118 47.5
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 2.1e-21 106.3 117 53.0
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 2.1e-21 106.3 123 48.8
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 2.7e-21 105.9 132 51.5
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 3.5e-21 105.5 96 56.2
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 3.5e-21 105.5 121 48.8
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 7.9e-21 104.4 132 50.0
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 7.9e-21 104.4 122 49.2
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 1.3e-20 103.6 115 52.2
Sc04g0001700 Simmondsia chinensis HOM05D002875 ORTHO05D003215 1.3e-20 103.6 131 44.3
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 2.3e-20 102.8 123 48.0
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 3.9e-20 102.1 122 45.9
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 5.1e-20 101.7 114 50.0
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 5.1e-20 101.7 119 49.6
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 8.7e-20 100.9 116 50.0
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 8.7e-20 100.9 108 49.1
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 5.7e-19 98.2 111 48.6
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 5.7e-19 98.2 123 48.0
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 2.2e-18 96.3 124 46.0
Ah.11g051480 Amaranthus hybridus HOM05D002875 ORTHO05D003215 2.8e-18 95.9 94 50.0
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 4.8e-18 95.1 123 46.3
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 1.1e-17 94.0 129 44.2
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 1.1e-17 94.0 129 44.2
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 1.8e-17 93.2 123 46.3
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 2.4e-17 92.8 123 47.2
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 2.4e-17 92.8 129 44.2
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 2.4e-17 92.8 123 45.5
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 3.1e-17 92.4 95 50.5
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 9.0e-17 90.9 121 43.8
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 1.5e-16 90.1 129 43.4
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 2.0e-16 89.7 121 44.6
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 2.0e-16 89.7 124 46.0
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 3.4e-16 89.0 117 41.9
Hma1.2p1_0149F.1_g066560 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 3.4e-16 89.0 138 42.8
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 5.9e-16 88.2 129 42.6
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 5.9e-16 88.2 119 40.3
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 5.9e-16 88.2 121 43.8
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 1.0e-15 87.4 123 43.1
Hma1.2p1_0149F.1_g066580 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 2.9e-15 85.9 131 43.5
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 3.8e-15 85.5 97 46.4
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 6.5e-15 84.7 117 43.6
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 6.1e-13 78.2 130 41.5
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 7.9e-13 77.8 54 66.7
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 6.7e-12 74.7 114 40.4
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 9.7e-11 70.9 92 43.5
Cpa.g.sc76.34 Carica papaya HOM05D002875 ORTHO05D003215 4.1e-09 65.5 53 60.4
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 5.3e-09 65.1 105 42.9
Hma1.2p1_0046F.1_g026650 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 4.5e-08 62.0 44 59.1
Nn8g41037 Nelumbo nucifera HOM05D002875 ORTHO05D003215 1.1e-06 57.4 30 76.7
Lj5A126T83 Lonicera japonica HOM05D002875 ORTHO05D003215 4.2e-06 55.5 41 58.5


User provided reference genes

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