Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p009343 Quercus lobata HOM05D002875 ORTHO05D003215 2.6e-159 565.5 312 100.0
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 3.0e-115 419.1 313 76.0
QL10p010118 Quercus lobata HOM05D002875 ORTHO05D003215 3.7e-113 412.1 314 74.8
QL10p009910 Quercus lobata HOM05D002875 ORTHO05D003215 1.4e-91 340.5 206 90.3
QL10p008975 Quercus lobata HOM05D002875 ORTHO05D003215 5.2e-75 285.4 310 56.8
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 2.6e-74 283.1 314 58.6
QL10p010243 Quercus lobata HOM05D002875 ORTHO05D003215 1.7e-70 270.4 310 55.2
QL10p009356 Quercus lobata HOM05D002875 ORTHO05D003215 5.4e-64 248.8 130 95.4
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 7.0e-64 248.4 309 54.7
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 1.7e-62 243.8 309 51.5
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 1.1e-59 234.6 311 51.8
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 3.1e-59 233.0 310 49.7
QL10p009041 Quercus lobata HOM05D002875 ORTHO05D003215 3.4e-58 229.6 313 51.4
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 9.8e-58 228.0 309 49.5
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 3.7e-57 226.1 316 49.7
QL10p010194 Quercus lobata HOM05D002875 ORTHO05D003215 4.9e-57 225.7 310 49.0
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 6.4e-57 225.3 309 50.8
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 8.3e-57 224.9 313 48.9
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 1.9e-56 223.8 309 51.1
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 2.4e-56 223.4 309 48.9
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 1.6e-55 220.7 310 50.0
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 7.8e-55 218.4 310 50.0
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 1.3e-54 217.6 310 47.4
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 2.3e-54 216.9 310 49.7
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 8.6e-54 214.9 309 48.2
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 2.5e-53 213.4 310 49.0
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 9.5e-53 211.5 309 46.9
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 1.2e-52 211.1 312 47.4
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 1.2e-52 211.1 310 49.7
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.6e-52 210.7 312 46.2
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 2.8e-52 209.9 311 46.3
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 4.7e-52 209.1 310 47.7
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 2.3e-51 206.8 310 46.1
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 4.0e-51 206.1 310 48.1
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 8.9e-51 204.9 310 47.4
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 8.9e-51 204.9 310 47.4
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 1.2e-50 204.5 309 44.7
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 1.5e-50 204.1 312 44.9
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 3.4e-50 203.0 309 44.0
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 4.4e-50 202.6 311 44.1
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 5.8e-50 202.2 310 46.1
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 5.8e-50 202.2 310 46.8
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 7.6e-50 201.8 310 46.1
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 2.9e-49 199.9 308 45.8
QL10p009307 Quercus lobata HOM05D002875 ORTHO05D003215 2.9e-49 199.9 204 55.9
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 6.4e-49 198.7 310 45.8
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 6.4e-49 198.7 310 46.1
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 8.4e-49 198.4 310 46.1
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 8.4e-49 198.4 310 46.5
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 1.1e-48 198.0 309 45.0
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 1.9e-48 197.2 309 44.0
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 1.9e-48 197.2 309 47.2
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 3.2e-48 196.4 310 45.5
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 4.1e-48 196.1 292 46.2
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 5.4e-48 195.7 312 45.8
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 5.4e-48 195.7 310 42.9
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 7.1e-48 195.3 308 46.4
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 7.1e-48 195.3 310 45.2
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 1.6e-47 194.1 309 46.3
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 2.1e-47 193.7 311 46.0
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 2.1e-47 193.7 308 45.1
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 4.6e-47 192.6 310 45.5
QL10p010149 Quercus lobata HOM05D002875 ORTHO05D003215 4.6e-47 192.6 205 56.6
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 4.6e-47 192.6 312 41.7
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 6.0e-47 192.2 312 44.6
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 6.0e-47 192.2 313 43.5
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 1.3e-46 191.0 309 44.3
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 1.3e-46 191.0 310 45.5
Nitab4.5_0003229g0110 Nicotiana tabacum HOM05D002875 ORTHO05D003215 1.3e-46 191.0 310 43.5
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 1.3e-46 191.0 312 43.9
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 2.3e-46 190.3 310 45.2
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 2.3e-46 190.3 310 41.6
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 3.0e-46 189.9 310 43.9
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 3.9e-46 189.5 310 45.5
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 3.9e-46 189.5 310 43.9
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 3.9e-46 189.5 309 46.0
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 6.6e-46 188.7 310 42.3
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 1.5e-45 187.6 310 45.5
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 1.5e-45 187.6 309 41.1
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 1.9e-45 187.2 310 45.2
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.9e-45 187.2 309 45.0
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 1.9e-45 187.2 310 44.8
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.5e-45 186.8 310 45.2
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 4.3e-45 186.0 310 45.2
CAN.G1166.11 Capsicum annuum HOM05D002875 ORTHO05D003215 4.3e-45 186.0 311 44.1
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 4.3e-45 186.0 311 44.1
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 7.3e-45 185.3 310 42.9
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 1.6e-44 184.1 310 45.2
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 1.6e-44 184.1 310 45.2
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 3.6e-44 183.0 310 44.8
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 4.7e-44 182.6 309 42.4
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 6.2e-44 182.2 312 42.0
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 8.1e-44 181.8 309 42.1
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 1.4e-43 181.0 309 41.7
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 1.8e-43 180.6 312 41.0
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 2.4e-43 180.3 308 41.6
QL10p009349 Quercus lobata HOM05D002875 ORTHO05D003215 4.0e-43 179.5 177 65.5
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 6.9e-43 178.7 308 41.2
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 1.2e-42 177.9 313 40.9
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 1.2e-42 177.9 318 42.1
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 1.5e-42 177.6 312 41.0
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 1.5e-42 177.6 312 43.9
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 2.0e-42 177.2 319 43.6
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 4.4e-42 176.0 310 40.3
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 3.8e-41 172.9 311 41.2
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 3.8e-41 172.9 311 41.2
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 4.2e-40 169.5 312 41.0
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 5.4e-40 169.1 311 41.8
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 3.5e-39 166.4 310 39.4
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 2.3e-38 163.7 288 41.3
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.3e-36 157.9 310 38.1
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 4.8e-36 156.0 219 49.3
QL10p009146 Quercus lobata HOM05D002875 ORTHO05D003215 1.2e-34 151.4 126 66.7
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.0e-34 150.6 310 39.7
Os05g0594500 Oryza sativa ssp. japonica HOM05D002875 ORTHO05D003215 2.9e-33 146.7 309 37.2
CiPaw.03G055700 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.2e-31 141.4 293 35.8
CSS0013993 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.7e-31 140.2 308 34.4
Cfa010845 Carpinus fangiana HOM05D002875 ORTHO05D003215 4.6e-31 139.4 304 35.9
QL10p009141 Quercus lobata HOM05D002875 ORTHO05D003215 1.0e-30 138.3 109 76.1
Zm00001eb345460 Zea mays HOM05D002875 ORTHO05D003215 1.8e-30 137.5 312 35.6
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 3.0e-30 136.7 268 38.4
Haze_03110 Corylus avellana HOM05D002875 ORTHO05D003215 5.1e-30 136.0 304 35.5
Actinidia04438 Actinidia chinensis HOM05D002875 ORTHO05D003215 1.5e-29 134.4 310 34.5
FAN18G3563 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.3e-29 132.9 202 43.6
FAN08G3091 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.3e-28 131.3 202 43.6
Rhsim08G0042800 Rhododendron simsii HOM05D002875 ORTHO05D003215 1.3e-28 131.3 315 31.7
Aqoxy5G03377 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 2.8e-28 130.2 310 34.2
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 4.8e-28 129.4 309 35.3
QL02p071336 Quercus lobata HOM05D002875 ORTHO05D003215 1.1e-27 128.3 332 33.1
Glyma.19G091300 Glycine max HOM05D002875 ORTHO05D003215 1.4e-27 127.9 309 33.0
Phvul.001G093400 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 2.4e-27 127.1 318 33.6
Gohir.A05G338300 Gossypium hirsutum HOM05D002875 ORTHO05D003215 6.9e-27 125.6 310 31.0
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 6.9e-27 125.6 310 33.2
RcHm_v2.0_Chr2g0175571 Rosa chinensis HOM05D002875 ORTHO05D003215 6.9e-27 125.6 312 31.4
VMungo1383G3279 Vigna mungo HOM05D002875 ORTHO05D003215 9.0e-27 125.2 316 33.9
Atru.chr6.2572 Acer truncatum HOM05D002875 ORTHO05D003215 2.0e-26 124.0 294 33.3
COL.COLO4_13262 Corchorus olitorius HOM05D002875 ORTHO05D003215 4.5e-26 122.9 312 31.4
Thecc.04G036100 Theobroma cacao HOM05D002875 ORTHO05D003215 4.5e-26 122.9 310 31.6
Hma1.2p1_0046F.1_g026650 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 7.6e-26 122.1 200 43.5
Ah.11g051480 Amaranthus hybridus HOM05D002875 ORTHO05D003215 1.7e-25 120.9 312 34.3
Gohir.D04G076700 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.7e-25 120.9 310 30.0
Prupe.3G306400 Prunus persica HOM05D002875 ORTHO05D003215 1.7e-25 120.9 305 31.1
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 4.9e-25 119.4 313 31.3
FvH4_6g53530 Fragaria vesca HOM05D002875 ORTHO05D003215 6.4e-25 119.0 313 30.7
Nn4g22316 Nelumbo nucifera HOM05D002875 ORTHO05D003215 6.4e-25 119.0 307 33.2
Gorai.012G086500 Gossypium raimondii HOM05D002875 ORTHO05D003215 1.4e-24 117.9 311 30.2
Glyma.16G056400 Glycine max HOM05D002875 ORTHO05D003215 1.9e-24 117.5 309 32.4
Mapoly0015s0063 Marchantia polymorpha HOM05D002875 ORTHO05D003215 1.9e-24 117.5 296 30.7
arahy.Tifrunner.gnm1.ann1.E3K3GD Arachis hypogaea HOM05D002875 ORTHO05D003215 4.2e-24 116.3 313 31.9
arahy.Tifrunner.gnm1.ann1.AA3MKH Arachis hypogaea HOM05D002875 ORTHO05D003215 9.3e-24 115.2 313 31.6
Pp3c9_12560 Physcomitrium patens HOM05D002875 ORTHO05D003215 9.3e-24 115.2 309 29.1
MD09G1010700 Malus domestica HOM05D002875 ORTHO05D003215 4.6e-23 112.8 304 30.6
Manes.17G103200 Manihot esculenta HOM05D002875 ORTHO05D003215 1.0e-22 111.7 314 31.2
Potri.001G330000 Populus trichocarpa HOM05D002875 ORTHO05D003215 5.1e-22 109.4 312 30.4
Lalb_Chr14g0363441 Lupinus albus HOM05D002875 ORTHO05D003215 6.7e-22 109.0 294 32.0
Pp3c9_870 Physcomitrium patens HOM05D002875 ORTHO05D003215 1.1e-21 108.2 311 30.5
CANSAT64G2306 Cannabis sativa HOM05D002875 ORTHO05D003215 1.5e-21 107.8 314 30.9
Hma1.2p1_0149F.1_g066560 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 4.3e-21 106.3 154 48.1
Hma1.2p1_0149F.1_g066580 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 2.1e-20 104.0 154 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3556 Anthoceros agrestis HOM05D002875 ORTHO05D003215 6.2e-20 102.4 232 33.2
CSS0041826 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 6.2e-20 102.4 252 32.1
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 6.2e-20 102.4 311 28.9
Pp3c1_22410 Physcomitrium patens HOM05D002875 ORTHO05D003215 6.2e-20 102.4 309 31.4
THA.LOC104823982 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 8.2e-20 102.1 313 30.4
TPR.G17138 Trifolium pratense HOM05D002875 ORTHO05D003215 5.3e-19 99.4 108 59.3
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 2.9e-17 93.6 153 41.8
Ciclev10014073m.g Citrus clementina HOM05D002875 ORTHO05D003215 3.8e-17 93.2 326 27.9
FAN14G0620 Fragaria x ananassa HOM05D002875 ORTHO05D003215 6.5e-17 92.4 327 27.2
Duzib187G0424 Durio zibethinus HOM05D002875 ORTHO05D003215 1.1e-16 91.7 204 32.8
arahy.Tifrunner.gnm1.ann1.2000FW Arachis hypogaea HOM05D002875 ORTHO05D003215 2.5e-16 90.5 201 34.3
GSVIVG01033092001 Vitis vinifera HOM05D002875 ORTHO05D003215 9.3e-16 88.6 296 28.7
MBI07_g16947_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 4.6e-15 86.3 201 33.3
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.3e-14 84.7 136 41.2
SMO343G0006 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 2.3e-14 84.0 145 40.0
PSO017G1731 Papaver somniferum HOM05D002875 ORTHO05D003215 9.7e-13 78.6 201 33.3
Lj5A126T83 Lonicera japonica HOM05D002875 ORTHO05D003215 1.3e-12 78.2 116 47.4
QL10p009415 Quercus lobata HOM05D002875 ORTHO05D003215 4.5e-10 69.7 96 52.1
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.0e-09 68.6 137 38.7
AagrBONN_evm.TU.Sc2ySwM_340.780 Anthoceros agrestis HOM05D002875 ORTHO05D003215 1.7e-09 67.8 100 45.0
MBI07_g16948_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 2.5e-08 63.9 91 46.2
DCAR_000966 Daucus carota HOM05D002875 ORTHO05D003215 5.5e-08 62.8 126 32.5
SEGI_01143 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 3.0e-06 57.0 111 33.3
QL10p010166 Quercus lobata HOM05D002875 ORTHO05D003215 8.7e-06 55.5 42 81.0


User provided reference genes

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