Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p008968 Quercus lobata HOM05D002875 ORTHO05D003215 5.5e-196 687.6 378 100.0
QL10p010250 Quercus lobata HOM05D002875 ORTHO05D003215 2.9e-152 542.3 360 82.8
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 2.9e-112 409.5 344 67.2
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 1.4e-103 380.6 396 57.8
QL10p010210 Quercus lobata HOM05D002875 ORTHO05D003215 2.5e-103 379.8 396 57.3
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 1.3e-99 367.5 350 60.0
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 1.3e-96 357.5 314 62.7
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 8.5e-96 354.8 318 61.3
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 3.2e-95 352.8 312 62.5
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 1.2e-94 350.9 395 55.4
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 6.1e-94 348.6 316 59.5
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 3.0e-93 346.3 340 56.5
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 5.1e-93 345.5 318 59.4
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 6.7e-93 345.1 320 60.0
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 1.1e-92 344.4 316 60.4
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.5e-92 343.2 314 61.1
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 4.3e-92 342.4 315 61.3
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 4.3e-92 342.4 346 57.5
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 7.4e-92 341.7 343 57.4
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 9.7e-92 341.3 317 59.9
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 9.7e-92 341.3 339 56.9
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 1.6e-91 340.5 320 58.4
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 4.8e-91 339.0 320 58.8
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 8.2e-91 338.2 318 59.7
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 8.2e-91 338.2 322 58.4
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 8.2e-91 338.2 322 58.1
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.8e-90 337.0 322 57.8
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 2.4e-90 336.7 318 59.4
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 3.1e-90 336.3 322 57.1
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 4.5e-89 332.4 318 58.8
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 5.9e-89 332.0 341 55.1
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 1.0e-88 331.3 317 57.1
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 1.7e-88 330.5 310 59.7
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 3.8e-88 329.3 318 56.6
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 1.4e-87 327.4 315 60.0
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 2.5e-87 326.6 328 57.3
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 4.2e-87 325.9 320 56.9
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 9.4e-87 324.7 341 54.3
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 1.2e-86 324.3 315 55.9
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 2.7e-86 323.2 360 56.7
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 3.6e-86 322.8 345 52.5
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.8e-85 320.5 327 56.0
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.5e-84 317.4 327 55.7
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 2.0e-84 317.0 314 56.4
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 4.4e-84 315.8 326 55.5
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 7.4e-84 315.1 344 52.9
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 1.3e-83 314.3 343 53.1
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 3.7e-83 312.8 314 56.1
Sc04g0001700 Simmondsia chinensis HOM05D002875 ORTHO05D003215 4.8e-83 312.4 335 52.2
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 6.3e-83 312.0 339 52.2
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 8.2e-83 311.6 314 55.7
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 1.1e-82 311.2 314 55.4
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 3.1e-82 309.7 326 54.9
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 1.2e-81 307.8 395 51.9
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 1.5e-81 307.4 319 53.9
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 2.0e-81 307.0 327 53.2
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 2.0e-81 307.0 327 54.4
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 2.0e-81 307.0 340 53.2
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 5.0e-80 302.4 317 53.0
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 6.5e-80 302.0 317 53.3
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 2.5e-79 300.1 364 49.5
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 3.2e-79 299.7 337 50.1
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 3.2e-79 299.7 317 54.3
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 7.2e-79 298.5 320 50.9
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 7.2e-79 298.5 320 50.9
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 9.4e-79 298.1 317 53.9
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 2.7e-78 296.6 317 53.3
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 2.7e-78 296.6 350 50.0
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 2.7e-78 296.6 323 52.3
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 3.6e-78 296.2 330 50.0
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 4.7e-78 295.8 330 50.0
Cpa.g.sc76.34 Carica papaya HOM05D002875 ORTHO05D003215 6.1e-78 295.4 287 58.5
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 1.0e-77 294.7 330 49.7
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 1.0e-77 294.7 330 49.7
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 1.4e-77 294.3 317 53.0
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 1.8e-77 293.9 315 51.1
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 2.3e-77 293.5 307 54.1
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 3.9e-77 292.7 311 52.4
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 6.7e-77 292.0 328 49.7
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 6.7e-77 292.0 342 50.3
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 8.8e-77 291.6 317 52.1
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 1.5e-76 290.8 328 49.7
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 1.5e-76 290.8 320 52.8
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 3.3e-76 289.7 322 51.6
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 5.7e-76 288.9 326 49.1
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 5.7e-76 288.9 314 52.2
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 7.4e-76 288.5 312 51.6
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 2.8e-75 286.6 330 48.5
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 2.8e-75 286.6 330 48.5
QL10p009301 Quercus lobata HOM05D002875 ORTHO05D003215 2.8e-75 286.6 380 47.6
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 3.7e-75 286.2 316 50.0
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 1.1e-74 284.6 376 48.7
QL10p009141 Quercus lobata HOM05D002875 ORTHO05D003215 1.4e-74 284.3 376 48.1
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 1.8e-74 283.9 330 49.1
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 2.4e-74 283.5 330 48.8
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 5.3e-74 282.3 320 50.0
QL10p010123 Quercus lobata HOM05D002875 ORTHO05D003215 7.0e-74 282.0 376 47.9
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 9.1e-74 281.6 416 43.8
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 2.0e-73 280.4 315 50.8
QL10p009914 Quercus lobata HOM05D002875 ORTHO05D003215 2.0e-73 280.4 368 49.2
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 3.5e-73 279.6 315 51.1
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 1.7e-72 277.3 362 47.0
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 1.5e-71 274.2 312 51.3
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 1.9e-71 273.9 326 50.0
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 1.0e-69 268.1 285 53.3
QL10p009349 Quercus lobata HOM05D002875 ORTHO05D003215 1.0e-69 268.1 366 47.3
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 4.0e-69 266.2 300 50.3
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 8.8e-69 265.0 313 48.9
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 2.6e-68 263.5 332 47.3
QL10p009338 Quercus lobata HOM05D002875 ORTHO05D003215 3.5e-65 253.1 373 46.4
Atru.chr9.2505 Acer truncatum HOM05D002875 ORTHO05D003215 1.3e-64 251.1 285 52.6
Os05g0594500 Oryza sativa ssp. japonica HOM05D002875 ORTHO05D003215 3.2e-63 246.5 316 45.6
QL10p010036 Quercus lobata HOM05D002875 ORTHO05D003215 4.7e-62 242.7 311 50.8
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 4.0e-61 239.6 312 45.8
Hma1.2p1_0660F.1_g197790 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 8.3e-59 231.9 327 45.6
TPR.G28903 Trifolium pratense HOM05D002875 ORTHO05D003215 8.3e-59 231.9 214 60.3
Zm00001eb345460 Zea mays HOM05D002875 ORTHO05D003215 8.6e-48 195.3 329 37.1
TPR.G17138 Trifolium pratense HOM05D002875 ORTHO05D003215 1.8e-42 177.6 317 41.0
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 5.2e-37 159.5 276 37.7
MD09G1010700 Malus domestica HOM05D002875 ORTHO05D003215 7.5e-36 155.6 321 34.0
CiPaw.03G055700 Carya illinoinensis HOM05D002875 ORTHO05D003215 2.9e-35 153.7 356 31.7
CANSAT64G2306 Cannabis sativa HOM05D002875 ORTHO05D003215 6.4e-35 152.5 324 30.6
Duzib187G1197 Durio zibethinus HOM05D002875 ORTHO05D003215 6.4e-35 152.5 353 32.6
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 3.2e-34 150.2 320 34.7
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 7.0e-34 149.1 324 32.7
QL02p071336 Quercus lobata HOM05D002875 ORTHO05D003215 7.0e-34 149.1 348 31.0
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 4.6e-33 146.4 354 31.6
Potri.001G330000 Populus trichocarpa HOM05D002875 ORTHO05D003215 6.0e-33 146.0 345 30.7
Cfa010845 Carpinus fangiana HOM05D002875 ORTHO05D003215 1.0e-32 145.2 344 33.1
Aqoxy5G03377 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 3.0e-32 143.7 327 32.4
MBI07_g16948_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 3.9e-32 143.3 323 33.7
Prupe.3G306400 Prunus persica HOM05D002875 ORTHO05D003215 5.0e-32 142.9 322 31.7
Mapoly0015s0063 Marchantia polymorpha HOM05D002875 ORTHO05D003215 8.6e-32 142.1 325 32.9
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 2.5e-31 140.6 311 33.8
SMO343G0006 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 4.3e-31 139.8 319 31.3
Haze_03110 Corylus avellana HOM05D002875 ORTHO05D003215 9.5e-31 138.7 352 31.8
Atru.chr6.2572 Acer truncatum HOM05D002875 ORTHO05D003215 1.2e-30 138.3 321 31.2
AagrBONN_evm.TU.Sc2ySwM_228.3556 Anthoceros agrestis HOM05D002875 ORTHO05D003215 1.2e-30 138.3 357 32.5
FvH4_6g53530 Fragaria vesca HOM05D002875 ORTHO05D003215 1.6e-30 137.9 324 30.6
Cpa.g.c44787 Carica papaya HOM05D002875 ORTHO05D003215 2.1e-30 137.5 94 76.6
Ciclev10014073m.g Citrus clementina HOM05D002875 ORTHO05D003215 2.1e-30 137.5 317 32.5
GSVIVG01033091001 Vitis vinifera HOM05D002875 ORTHO05D003215 2.1e-30 137.5 322 33.2
FAN14G0620 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.8e-30 137.1 324 30.6
COL.COLO4_13262 Corchorus olitorius HOM05D002875 ORTHO05D003215 6.2e-30 136.0 320 31.9
Hma1.2p1_0149F.1_g066580 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 1.8e-29 134.4 527 26.9
Thecc.04G036100 Theobroma cacao HOM05D002875 ORTHO05D003215 2.3e-29 134.0 320 30.9
Nn4g22316 Nelumbo nucifera HOM05D002875 ORTHO05D003215 3.1e-29 133.7 323 30.7
SEGI_08382 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 3.1e-29 133.7 318 31.4
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.0e-29 133.3 324 30.2
Actinidia04438 Actinidia chinensis HOM05D002875 ORTHO05D003215 2.0e-28 131.0 345 31.6
Gohir.D04G076700 Gossypium hirsutum HOM05D002875 ORTHO05D003215 5.8e-28 129.4 320 31.2
Gorai.012G086500 Gossypium raimondii HOM05D002875 ORTHO05D003215 5.8e-28 129.4 320 31.2
Manes.17G103200 Manihot esculenta HOM05D002875 ORTHO05D003215 5.8e-28 129.4 345 29.6
QL06p021162 Quercus lobata HOM05D002875 ORTHO05D003215 6.4e-27 125.9 148 51.4
Cpa.g.sc171.14 Carica papaya HOM05D002875 ORTHO05D003215 1.9e-26 124.4 335 30.1
Glyma.16G056400 Glycine max HOM05D002875 ORTHO05D003215 2.4e-26 124.0 322 30.4
Hma1.2p1_0149F.1_g066560 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 2.4e-26 124.0 133 49.6
Phvul.001G093400 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 2.4e-26 124.0 323 29.7
Lalb_Chr14g0363441 Lupinus albus HOM05D002875 ORTHO05D003215 3.2e-26 123.6 321 30.5
PSO478G3098 Papaver somniferum HOM05D002875 ORTHO05D003215 1.2e-25 121.7 316 30.7
Pp3c9_870 Physcomitrium patens HOM05D002875 ORTHO05D003215 1.2e-25 121.7 324 30.2
arahy.Tifrunner.gnm1.ann1.AA3MKH Arachis hypogaea HOM05D002875 ORTHO05D003215 1.6e-25 121.3 323 27.2
arahy.Tifrunner.gnm1.ann1.E3K3GD Arachis hypogaea HOM05D002875 ORTHO05D003215 1.6e-25 121.3 323 27.6
PSO017G7193 Papaver somniferum HOM05D002875 ORTHO05D003215 4.6e-25 119.8 318 32.1
Pp3c9_12560 Physcomitrium patens HOM05D002875 ORTHO05D003215 7.8e-25 119.0 320 29.4
vmacro18347 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 7.8e-25 119.0 337 29.7
Glyma.19G091300 Glycine max HOM05D002875 ORTHO05D003215 5.1e-24 116.3 321 27.7
VMungo1383G3279 Vigna mungo HOM05D002875 ORTHO05D003215 5.1e-24 116.3 324 29.3
DCAR_000966 Daucus carota HOM05D002875 ORTHO05D003215 8.6e-24 115.5 350 28.0
Rhsim08G0042800 Rhododendron simsii HOM05D002875 ORTHO05D003215 1.5e-23 114.8 392 27.8
THA.LOC104823982 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 9.5e-23 112.1 287 27.9
Pp3c1_22410 Physcomitrium patens HOM05D002875 ORTHO05D003215 2.8e-22 110.5 319 31.7
Gohir.A05G338300 Gossypium hirsutum HOM05D002875 ORTHO05D003215 6.2e-22 109.4 246 32.9
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 8.9e-21 105.5 309 28.5
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 1.2e-20 105.1 338 29.3
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.2e-19 100.9 293 28.0
CSS0013993 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 4.9e-19 99.8 326 29.4
CSS0041276 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.4e-18 97.4 315 30.5
RcHm_v2.0_Chr2g0175571 Rosa chinensis HOM05D002875 ORTHO05D003215 7.1e-18 95.9 229 32.8
QL10p009041 Quercus lobata HOM05D002875 ORTHO05D003215 9.6e-15 85.5 184 35.9
AagrBONN_evm.TU.Sc2ySwM_340.781 Anthoceros agrestis HOM05D002875 ORTHO05D003215 2.7e-09 67.4 75 49.3


User provided reference genes

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