Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p005098 Quercus lobata HOM05D005223 ORTHO05D006449 3.0e-102 375.2 187 100.0
QL10p005060 Quercus lobata HOM05D005223 ORTHO05D006449 9.8e-45 184.1 176 64.8
MD14G1163600 Malus domestica HOM05D005223 ORTHO05D006449 5.9e-34 148.3 172 50.0
Cfa018892 Carpinus fangiana HOM05D005223 ORTHO05D006449 1.0e-33 147.5 177 52.0
Haze_07276 Corylus avellana HOM05D005223 ORTHO05D006449 2.3e-33 146.4 177 51.4
CiPaw.12G035700 Carya illinoinensis HOM05D005223 ORTHO05D006449 5.0e-33 145.2 175 50.3
Cpa.g.sc52.34 Carica papaya HOM05D005223 ORTHO05D006449 3.3e-32 142.5 161 50.3
Prupe.5G157000 Prunus persica HOM05D005223 ORTHO05D006449 4.3e-32 142.1 172 48.8
Atru.chr9.1012 Acer truncatum HOM05D005223 ORTHO05D006449 5.6e-32 141.7 167 49.1
Ciclev10018616m.g Citrus clementina HOM05D005223 ORTHO05D006449 1.2e-31 140.6 169 48.5
RcHm_v2.0_Chr7g0191161 Rosa chinensis HOM05D005223 ORTHO05D006449 6.8e-30 134.8 190 44.7
FAN13G2650 Fragaria x ananassa HOM05D005223 ORTHO05D006449 2.6e-29 132.9 162 50.0
FvH4_5g07490 Fragaria vesca HOM05D005223 ORTHO05D006449 3.4e-29 132.5 165 49.7
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 3.4e-29 132.5 168 46.4
FAN04G2946 Fragaria x ananassa HOM05D005223 ORTHO05D006449 7.5e-29 131.3 165 49.7
FAN18G3380 Fragaria x ananassa HOM05D005223 ORTHO05D006449 9.8e-29 131.0 165 49.1
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla HOM05D005223 ORTHO05D006449 2.9e-28 129.4 171 44.4
Thecc.03G122800 Theobroma cacao HOM05D005223 ORTHO05D006449 4.9e-28 128.6 169 43.2
Eucgr.L01337 Eucalyptus grandis HOM05D005223 ORTHO05D006449 6.4e-28 128.3 165 47.3
Dinv38469 Davidia involucrata HOM05D005223 ORTHO05D006449 1.1e-27 127.5 155 49.7
Eucgr.B00148 Eucalyptus grandis HOM05D005223 ORTHO05D006449 1.1e-27 127.5 167 48.5
Lalb_Chr08g0236961 Lupinus albus HOM05D005223 ORTHO05D006449 1.1e-27 127.5 172 46.5
Sed0011232 Sechium edule HOM05D005223 ORTHO05D006449 1.1e-27 127.5 171 46.8
Actinidia19387 Actinidia chinensis HOM05D005223 ORTHO05D006449 2.4e-27 126.3 191 42.9
CANSAT80G2773 Cannabis sativa HOM05D005223 ORTHO05D006449 2.4e-27 126.3 172 45.3
Nn4g22461 Nelumbo nucifera HOM05D005223 ORTHO05D006449 2.4e-27 126.3 169 47.9
Manes.06G115300 Manihot esculenta HOM05D005223 ORTHO05D006449 3.2e-27 125.9 163 44.8
Gohir.A07G053500 Gossypium hirsutum HOM05D005223 ORTHO05D006449 5.4e-27 125.2 176 44.9
ClCG03G003490 Citrullus lanatus HOM05D005223 ORTHO05D006449 9.2e-27 124.4 171 44.4
MELO3C002332.2 Cucumis melo HOM05D005223 ORTHO05D006449 9.2e-27 124.4 171 44.4
Duzib084G0239 Durio zibethinus HOM05D005223 ORTHO05D006449 2.0e-26 123.2 167 43.1
Phvul.009G168800 Phaseolus vulgaris HOM05D005223 ORTHO05D006449 2.0e-26 123.2 167 46.1
TWI14G1297 Tripterygium wilfordii HOM05D005223 ORTHO05D006449 2.0e-26 123.2 173 44.5
VMungo1309G0017 Vigna mungo HOM05D005223 ORTHO05D006449 4.6e-26 122.1 172 45.9
MBI11_g36316_MAGBIO Magnolia biondii HOM05D005223 ORTHO05D006449 6.0e-26 121.7 169 46.2
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 6.0e-26 121.7 179 44.1
Aqoxy5G03583 Aquilegia oxysepala HOM05D005223 ORTHO05D006449 1.0e-25 120.9 175 42.3
Gorai.001G061400 Gossypium raimondii HOM05D005223 ORTHO05D006449 1.0e-25 120.9 173 43.4
CsaV3_1G009290 Cucumis sativus L. HOM05D005223 ORTHO05D006449 1.3e-25 120.6 171 42.1
Medtr3g075100 Medicago truncatula HOM05D005223 ORTHO05D006449 1.3e-25 120.6 172 44.8
vmacro19239 Vaccinium macrocarpon HOM05D005223 ORTHO05D006449 1.3e-25 120.6 179 43.6
Gohir.D07G057900 Gossypium hirsutum HOM05D005223 ORTHO05D006449 1.7e-25 120.2 173 42.8
CSS0037650 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 2.3e-25 119.8 173 44.5
Psat5g141880 Pisum sativum HOM05D005223 ORTHO05D006449 2.3e-25 119.8 172 44.2
PGR083G1937 Punica granatum HOM05D005223 ORTHO05D006449 3.0e-25 119.4 159 45.9
CAN.G1110.40 Capsicum annuum HOM05D005223 ORTHO05D006449 3.9e-25 119.0 169 43.8
Nitab4.5_0002775g0020 Nicotiana tabacum HOM05D005223 ORTHO05D006449 3.9e-25 119.0 172 42.4
Ca_16089_v3 Cicer arietinum L. HOM05D005223 ORTHO05D006449 5.0e-25 118.6 172 43.6
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea HOM05D005223 ORTHO05D006449 6.6e-25 118.2 179 43.6
Potri.015G090700 Populus trichocarpa HOM05D005223 ORTHO05D006449 8.6e-25 117.9 172 43.0
Rhsim08G0185000 Rhododendron simsii HOM05D005223 ORTHO05D006449 1.5e-24 117.1 194 39.7
Lj9C475T6 Lonicera japonica HOM05D005223 ORTHO05D006449 1.9e-24 116.7 152 46.1
Sopen10g002700 Solanum pennellii HOM05D005223 ORTHO05D006449 4.3e-24 115.5 169 42.0
GSVIVG01007540001 Vitis vinifera HOM05D005223 ORTHO05D006449 4.3e-24 115.5 223 39.5
Nitab4.5_0000955g0070 Nicotiana tabacum HOM05D005223 ORTHO05D006449 7.3e-24 114.8 172 41.3
THA.LOC104818196 Tarenaya hassleriana HOM05D005223 ORTHO05D006449 9.5e-24 114.4 171 41.5
Lj1g0000662 Lotus japonicus HOM05D005223 ORTHO05D006449 1.6e-23 113.6 165 44.2
Solyc10g006780.4 Solanum lycopersicum HOM05D005223 ORTHO05D006449 1.6e-23 113.6 169 41.4
Glyma.04G193000 Glycine max HOM05D005223 ORTHO05D006449 2.1e-23 113.2 171 44.4
SalBow5G2547 Salvia bowleyana HOM05D005223 ORTHO05D006449 4.7e-23 112.1 169 40.8
PGSC0003DMG400025026 Solanum tuberosum HOM05D005223 ORTHO05D006449 6.2e-23 111.7 169 41.4
Migut.I00475 Erythranthe guttata HOM05D005223 ORTHO05D006449 1.4e-22 110.5 171 40.4
CSS0005553 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 2.3e-22 109.8 173 42.8
AL5G27880 Arabidopsis lyrata HOM05D005223 ORTHO05D006449 3.1e-22 109.4 172 40.1
AT3G48470 Arabidopsis thaliana HOM05D005223 ORTHO05D006449 4.0e-22 109.0 176 39.2
CARHR157230 Cardamine hirsuta HOM05D005223 ORTHO05D006449 5.2e-22 108.6 169 39.1
Carub.0005s1465 Capsella rubella HOM05D005223 ORTHO05D006449 6.8e-22 108.2 165 40.6
MSTRG.11293 Avicennia marina HOM05D005223 ORTHO05D006449 2.6e-21 106.3 172 40.7
Sp5g13560 Schrenkiella parvula HOM05D005223 ORTHO05D006449 2.6e-21 106.3 168 39.3
TPR.G13978 Trifolium pratense HOM05D005223 ORTHO05D006449 3.4e-21 105.9 172 42.4
Cc04_g10370 Coffea canephora HOM05D005223 ORTHO05D006449 4.4e-21 105.5 187 37.4
DCAR_021603 Daucus carota HOM05D005223 ORTHO05D006449 4.4e-21 105.5 168 43.5
SGA_v2.0_scaffold457G51932 Striga asiatica HOM05D005223 ORTHO05D006449 5.8e-21 105.1 178 38.8
PSO063G1058 Papaver somniferum HOM05D005223 ORTHO05D006449 2.2e-20 103.2 166 39.8
ECA246G2102 Erigeron canadensis HOM05D005223 ORTHO05D006449 3.7e-20 102.4 174 37.4
Oeu057221.1 Olea europaea HOM05D005223 ORTHO05D006449 5.4e-19 98.6 176 38.6
ATR0824G104 Amborella trichopoda HOM05D005223 ORTHO05D006449 2.1e-18 96.7 182 38.5
Aa31LG4G17050 Aethionema arabicum HOM05D005223 ORTHO05D006449 1.0e-17 94.4 177 34.5
C03p66340 Brassica napus HOM05D005223 ORTHO05D006449 1.0e-17 94.4 172 39.0
Lsat_1_v5_gn_5_13240 Lactuca sativa HOM05D005223 ORTHO05D006449 1.0e-17 94.4 185 35.7
CDE02G2587 Ceratophyllum demersum HOM05D005223 ORTHO05D006449 1.7e-17 93.6 172 36.6
HanXRQChr05g0154741 Helianthus annuus HOM05D005223 ORTHO05D006449 2.3e-17 93.2 169 36.7
BolC3t18905H Brassica oleracea HOM05D005223 ORTHO05D006449 1.1e-16 90.9 172 38.4
BraA06t25704Z Brassica rapa HOM05D005223 ORTHO05D006449 1.1e-16 90.9 170 38.8
BcaC01g02344 Brassica carinata HOM05D005223 ORTHO05D006449 1.9e-16 90.1 172 37.8
BcaB02g10650 Brassica carinata HOM05D005223 ORTHO05D006449 4.7e-15 85.5 178 36.0
A06p27680 Brassica napus HOM05D005223 ORTHO05D006449 4.7e-15 85.5 171 36.8
Peaxi162Scf00536g00422 Petunia axillaris HOM05D005223 ORTHO05D006449 1.4e-14 84.0 167 35.9
RcHm_v2.0_Chr1g0339741 Rosa chinensis HOM05D005223 ORTHO05D006449 1.4e-14 84.0 56 75.0
Thhalv10010098m.g Eutrema salsugineum HOM05D005223 ORTHO05D006449 6.8e-14 81.6 172 33.7
FvH4_3g25520 Fragaria vesca HOM05D005223 ORTHO05D006449 1.2e-13 80.9 62 64.5
EL10Ac7g18074 Beta vulgaris HOM05D005223 ORTHO05D006449 9.9e-13 77.8 167 34.7
FvH4_5g07460 Fragaria vesca HOM05D005223 ORTHO05D006449 1.3e-12 77.4 162 36.4
RcHm_v2.0_Chr4g0412201 Rosa chinensis HOM05D005223 ORTHO05D006449 6.4e-12 75.1 54 72.2
Os02g0598800 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 1.9e-11 73.6 167 32.3
AUR62025728 Chenopodium quinoa HOM05D005223 ORTHO05D006449 9.2e-11 71.2 166 32.5
Hund18539 Selenicereus undatus HOM05D005223 ORTHO05D006449 1.6e-10 70.5 63 52.4
Sc10g0010350 Simmondsia chinensis HOM05D005223 ORTHO05D006449 7.8e-10 68.2 56 60.7
FvH4_5g07361 Fragaria vesca HOM05D005223 ORTHO05D006449 1.0e-09 67.8 45 73.3
AUR62001278 Chenopodium quinoa HOM05D005223 ORTHO05D006449 1.7e-09 67.0 166 31.9
Zm00001eb246300 Zea mays HOM05D005223 ORTHO05D006449 2.5e-08 63.2 160 29.4
SEGI_02888 Sequoiadendron giganteum HOM05D005223 ORTHO05D006449 3.1e-06 56.2 177 28.8


User provided reference genes

Program Settings