Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 3.9e-221 771.2 390 100.0
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 2.4e-210 735.3 390 94.6
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 1.4e-173 613.2 392 77.6
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 1.7e-168 596.3 392 75.8
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 1.9e-159 566.2 376 75.3
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 7.5e-148 527.7 391 67.3
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 8.3e-147 524.2 392 63.5
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 9.2e-146 520.8 389 66.1
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 4.6e-145 518.5 389 64.8
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 6.0e-145 518.1 393 63.6
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.5e-143 512.7 393 62.6
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.5e-143 512.7 393 62.6
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 1.6e-142 510.0 390 63.8
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 6.2e-142 508.1 393 62.6
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 8.9e-141 504.2 393 62.1
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 4.4e-140 501.9 392 62.2
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 9.8e-140 500.7 391 62.9
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 6.4e-139 498.0 391 62.7
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.1e-138 497.3 387 65.1
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.4e-138 496.9 391 62.4
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.9e-138 496.5 389 62.7
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 3.2e-138 495.7 392 63.5
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 2.7e-137 492.7 391 62.1
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 3.5e-137 492.3 392 61.2
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 1.3e-136 490.3 393 62.6
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.7e-136 490.0 391 62.1
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 2.3e-136 489.6 392 62.2
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 1.5e-135 486.9 393 61.6
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 7.3e-135 484.6 392 62.5
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 9.5e-135 484.2 391 61.6
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 1.1e-133 480.7 392 61.2
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 1.5e-132 476.9 392 58.7
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 8.4e-131 471.1 392 59.7
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 8.4e-131 471.1 391 58.8
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.1e-130 470.7 393 60.3
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 3.2e-130 469.2 392 58.4
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 5.4e-130 468.4 391 59.6
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 9.2e-130 467.6 392 57.9
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 9.2e-130 467.6 394 60.7
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 9.2e-130 467.6 390 57.2
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 3.5e-129 465.7 389 57.3
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 6.0e-129 464.9 394 58.9
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 6.0e-129 464.9 392 58.4
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.3e-128 463.0 392 57.9
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 3.0e-128 462.6 391 58.6
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 6.6e-128 461.5 347 66.3
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 8.6e-128 461.1 393 58.3
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 2.5e-127 459.5 392 58.4
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 5.6e-127 458.4 373 61.1
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 9.6e-127 457.6 392 58.4
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 2.8e-126 456.1 392 57.9
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 4.7e-126 455.3 393 59.3
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 6.2e-126 454.9 391 57.5
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.8e-125 453.4 392 57.7
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 4.0e-125 452.2 392 58.7
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 9.9e-124 447.6 391 55.8
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 3.5e-121 439.1 391 56.8
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 7.8e-121 438.0 395 53.9
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 7.3e-119 431.4 395 55.2
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 1.6e-118 430.3 411 54.0
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.6e-118 430.3 394 57.1
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 6.2e-118 428.3 395 55.7
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.1e-117 427.6 391 55.8
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 3.1e-117 426.0 388 54.4
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 2.2e-115 419.9 392 54.6
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 3.8e-115 419.1 390 53.8
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 1.1e-114 417.5 387 54.5
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 1.4e-114 417.2 390 53.1
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 2.4e-114 416.4 392 53.8
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 9.3e-114 414.5 418 52.4
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 3.9e-112 409.1 417 50.8
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 3.9e-112 409.1 417 50.8
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 6.6e-112 408.3 392 53.6
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 9.6e-111 404.4 417 50.1
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 3.1e-109 399.4 395 53.4
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 4.0e-109 399.1 392 51.5
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 5.8e-108 395.2 419 51.3
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 1.3e-107 394.0 393 51.4
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 3.8e-107 392.5 389 48.6
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 8.4e-107 391.3 389 48.8
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 4.2e-106 389.0 404 50.0
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 1.6e-105 387.1 391 47.6
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.7e-105 386.3 389 49.6
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.0e-104 384.4 390 49.5
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 4.3e-103 379.0 389 48.6
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 7.4e-103 378.3 390 49.2
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 9.6e-103 377.9 393 49.1
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 4.8e-102 375.6 394 49.2
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 4.9e-99 365.5 397 48.1
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 6.5e-99 365.2 392 48.0
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 9.3e-98 361.3 394 46.4
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 9.3e-98 361.3 392 50.0
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 1.6e-97 360.5 386 48.4
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 1.6e-97 360.5 341 56.0
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 2.7e-97 359.8 392 48.7
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 3.5e-97 359.4 314 58.3
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 6.7e-96 355.1 397 47.1
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 9.6e-95 351.3 396 46.7
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 2.4e-93 346.7 384 48.2
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.2e-92 344.4 398 45.0
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.5e-92 344.0 262 62.6
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.0e-92 343.6 391 45.0
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 2.0e-92 343.6 396 46.5
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 6.5e-91 338.6 398 44.2
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.1e-90 337.8 373 46.9
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 6.1e-89 332.0 393 47.1
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.3e-88 330.1 393 43.8
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 1.9e-87 327.0 393 43.5
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.2e-83 313.5 270 56.3
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 8.8e-80 301.6 333 46.2
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 1.4e-74 284.3 296 49.3
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 8.2e-62 241.9 179 68.2
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 1.1e-58 231.5 421 36.1
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 4.3e-42 176.4 246 37.4
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 5.6e-42 176.0 377 31.3
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 6.8e-40 169.1 311 37.0
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 6.4e-38 162.5 392 28.3
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 4.3e-34 149.8 268 37.3
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 3.1e-32 143.7 341 29.0
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 2.6e-31 140.6 388 30.2
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.0e-27 128.6 438 28.5
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 9.5e-26 122.1 180 41.7
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 6.8e-24 115.9 179 42.5
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 2.0e-23 114.4 290 29.3
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 4.4e-23 113.2 382 24.9
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 4.4e-23 113.2 382 24.9
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 4.9e-22 109.8 398 23.4
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 3.4e-15 87.0 181 34.8
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 1.7e-14 84.7 249 26.5
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 3.0e-11 73.9 285 25.6
COL.COLO4_31086 Corchorus olitorius HOM05D002504 ORTHO05D007555 5.2e-08 63.2 62 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2581 Anthoceros agrestis HOM05D002504 ORTHO05D007555 2.2e-06 57.8 176 29.5


User provided reference genes

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