Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 0.0e+00 1380.2 784 100.0
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 1.1e-211 740.7 801 62.8
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 6.9e-76 289.7 1038 32.5
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 2.2e-58 231.5 806 35.2
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 3.5e-51 207.6 817 34.3
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 1.7e-42 178.7 839 29.6
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 3.0e-39 167.9 850 29.9
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 4.5e-35 154.1 813 29.2
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 5.9e-35 153.7 999 29.7
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 7.7e-35 153.3 807 29.7
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 1.0e-34 152.9 878 29.4
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 6.6e-34 150.2 811 29.2
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.5e-33 148.3 841 29.8
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 2.1e-32 145.2 873 27.8
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.8e-32 144.8 835 29.1
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 5.2e-31 140.6 854 28.3
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 8.9e-31 139.8 1021 26.4
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 2.6e-30 138.3 850 28.7
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 4.4e-30 137.5 845 29.3
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 5.7e-30 137.1 834 31.2
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 1.3e-29 136.0 838 27.6
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 2.2e-29 135.2 855 29.2
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 6.4e-29 133.7 834 26.6
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 2.8e-24 118.2 859 26.5
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 3.6e-24 117.9 823 27.3
FAN26G1572 Fragaria x ananassa HOM05D012473 ORTHO05D010844 4.7e-24 117.5 823 28.3
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 2.3e-23 115.2 732 28.0
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 3.1e-23 114.8 790 27.1
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 1.2e-22 112.8 838 26.0
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 1.2e-22 112.8 798 27.6
Oeu028233.1 Olea europaea HOM05D010873 ORTHO05D013124 3.2e-20 104.8 834 27.2
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 2.0e-19 102.1 789 26.5
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 4.6e-19 100.9 599 27.2
Nn3g21159 Nelumbo nucifera HOM05D012218 ORTHO05D019306 3.3e-17 94.7 922 25.2
PGR102G2674 Punica granatum HOM05D012473 ORTHO05D010844 4.3e-17 94.4 797 26.6
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 2.8e-16 91.7 183 46.4
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 6.2e-16 90.5 181 41.4
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 1.8e-15 89.0 715 24.9
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 3.1e-15 88.2 840 24.5
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 1.4e-12 79.3 852 26.2
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 1.9e-12 79.0 160 43.1
FvH4_5g34270 Fragaria vesca HOM05D012473 ORTHO05D010844 2.4e-12 78.6 292 30.8
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 3.2e-12 78.2 744 24.5
THA.LOC104800245 Tarenaya hassleriana HOM05D009813 ORTHO05D011936 4.1e-12 77.8 792 24.2
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 1.2e-11 76.3 211 35.5
Sed0024256 Sechium edule HOM05D036858 ORTHO05D010844 4.6e-11 74.3 212 34.4
vmacro12771 Vaccinium macrocarpon HOM05D017996 ORTHO05D017165 6.0e-11 73.9 192 35.9
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 7.8e-11 73.6 164 32.9
SalBow6G5290 Salvia bowleyana HOM05D010873 ORTHO05D013124 1.3e-10 72.8 857 23.6
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 6.6e-10 70.5 180 31.1
Solyc05g008490.2 Solanum lycopersicum HOM05D010873 ORTHO05D013124 1.5e-09 69.3 285 27.7
Sopen05g004330 Solanum pennellii HOM05D010873 ORTHO05D013124 2.5e-09 68.6 864 23.0
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 4.3e-09 67.8 189 30.7
PGSC0003DMG400030562 Solanum tuberosum HOM05D010873 ORTHO05D013124 4.3e-09 67.8 859 24.9
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 5.6e-09 67.4 189 30.7
BcaC04g23353 Brassica carinata HOM05D009813 ORTHO05D011936 2.8e-08 65.1 170 41.2
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 4.7e-08 64.3 168 28.6
A09p08400 Brassica napus HOM05D009813 ORTHO05D011936 2.3e-07 62.0 173 37.6
BraA09t36490Z Brassica rapa HOM05D009813 ORTHO05D011936 2.3e-07 62.0 173 37.6
CSS0038628 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 4.0e-07 61.2 184 32.1
BcaNung04641 Brassica carinata HOM05D009813 ORTHO05D011936 8.9e-07 60.1 175 34.9
DCAR_022171 Daucus carota HOM05D010873 ORTHO05D013124 8.9e-07 60.1 400 26.5
ECA233G2412 Erigeron canadensis HOM05D037976 ORTHO05D035162 1.2e-06 59.7 172 31.4
AUR62003591 Chenopodium quinoa HOM05D030946 ORTHO05D010844 1.5e-06 59.3 123 35.0
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 1.5e-06 59.3 165 30.9
AT5G63720 Arabidopsis thaliana HOM05D009813 ORTHO05D011936 2.0e-06 58.9 172 31.4
Atru.chr6.1276 Acer truncatum HOM05D017996 ORTHO05D017165 2.6e-06 58.5 197 34.0
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 2.6e-06 58.5 155 32.9
CSS0030355 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 3.4e-06 58.2 184 31.5
CSS0006956 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 9.9e-06 56.6 161 34.2
CSS0018747 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 9.9e-06 56.6 161 34.2
FAN08G2906 Fragaria x ananassa HOM05D012473 ORTHO05D010844 9.9e-06 56.6 169 34.3


User provided reference genes

Program Settings