Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 9.7e-107 390.2 202 100.0
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 1.1e-46 190.7 196 63.3
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 3.8e-42 175.6 190 59.5
Cfa018889 Carpinus fangiana HOM05D008121 ORTHO05D009878 3.2e-41 172.6 200 58.0
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 5.3e-36 155.2 194 55.2
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 7.3e-30 134.8 201 47.8
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 4.5e-27 125.6 190 46.3
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 4.9e-26 122.1 195 47.7
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 1.2e-24 117.5 193 45.1
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 3.3e-22 109.4 192 41.7
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 2.1e-21 106.7 195 42.6
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 4.8e-21 105.5 193 40.4
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 1.1e-20 104.4 194 40.2
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.1e-20 104.4 161 44.1
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 3.4e-19 99.4 196 39.3
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 4.5e-19 99.0 165 46.1
ClCG03G003530 Citrullus lanatus HOM05D008121 ORTHO05D009878 7.6e-19 98.2 192 43.2
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 7.6e-19 98.2 191 39.8
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 2.2e-18 96.7 204 43.6
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 3.8e-18 95.9 168 43.5
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 4.2e-17 92.4 185 43.2
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 5.5e-17 92.0 174 40.8
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 9.3e-17 91.3 172 40.1
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 2.1e-16 90.1 199 36.7
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 1.3e-15 87.4 191 37.2
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 1.8e-15 87.0 193 40.4
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 3.9e-15 85.9 170 36.5
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 3.9e-15 85.9 159 43.4
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 3.9e-15 85.9 195 39.5
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 1.1e-14 84.3 194 37.6
FAN18G2983 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.1e-14 84.3 159 42.8
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 1.1e-14 84.3 159 42.8
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 4.3e-14 82.4 164 36.6
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 5.7e-14 82.0 169 36.7
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 2.1e-13 80.1 169 36.7
arahy.Tifrunner.gnm1.ann1.DV5N5R Arachis hypogaea HOM05D008121 ORTHO05D009878 1.8e-12 77.0 179 36.9
CsaV3_1G009340 Cucumis sativus L. HOM05D008121 ORTHO05D009878 1.8e-12 77.0 192 39.6
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 1.8e-12 77.0 179 39.1
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 1.8e-12 77.0 159 35.2
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 1.8e-12 77.0 149 38.9
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 2.4e-12 76.6 189 32.8
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 2.4e-12 76.6 190 33.2
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 4.1e-12 75.9 197 38.6
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 4.1e-12 75.9 189 33.3
arahy.Tifrunner.gnm1.ann1.YZZN9M Arachis hypogaea HOM05D008121 ORTHO05D009878 5.3e-12 75.5 179 36.3
Glyma.17G127300 Glycine max HOM05D008121 ORTHO05D009878 5.3e-12 75.5 163 40.5
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 6.9e-12 75.1 159 35.8
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.5e-11 73.9 184 35.3
Glyma.05G045100 Glycine max HOM05D008121 ORTHO05D009878 2.0e-11 73.6 181 35.9
Lj4g0024363 Lotus japonicus HOM05D008121 ORTHO05D009878 2.0e-11 73.6 150 40.0
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.7e-10 70.5 185 31.9
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 2.2e-10 70.1 165 31.5
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 2.2e-10 70.1 173 35.8
PSO384G0802 Papaver somniferum HOM05D008121 ORTHO05D009878 2.2e-10 70.1 70 54.3
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 2.9e-10 69.7 144 36.8
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 2.9e-10 69.7 70 54.3
Lalb_Chr13g0297421 Lupinus albus HOM05D008121 ORTHO05D009878 5.0e-10 68.9 169 36.7
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 2.5e-09 66.6 168 33.3
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 3.2e-09 66.2 189 31.2
Eucgr.K02754 Eucalyptus grandis HOM05D011481 ORTHO05D009878 7.1e-09 65.1 191 35.6
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 9.3e-09 64.7 163 33.1
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 1.6e-08 63.9 142 35.2
Medtr4g104040 Medicago truncatula HOM05D008121 ORTHO05D009878 2.7e-08 63.2 180 35.0
Phvul.003G208400 Phaseolus vulgaris HOM05D008121 ORTHO05D009878 2.7e-08 63.2 189 34.4
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 7.9e-08 61.6 179 33.5
TPR.G37567 Trifolium pratense HOM05D008121 ORTHO05D009878 7.9e-08 61.6 123 39.8
Hund05652 Selenicereus undatus HOM05D008121 ORTHO05D009878 3.0e-07 59.7 51 62.7
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 3.9e-07 59.3 49 61.2
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 3.9e-07 59.3 49 61.2
ECA232G1254 Erigeron canadensis HOM05D008121 ORTHO05D009878 5.1e-07 58.9 142 33.8
Carub.0005s1467 Capsella rubella HOM05D011481 ORTHO05D009878 6.7e-07 58.5 140 35.7
THA.LOC104821506 Tarenaya hassleriana HOM05D011481 ORTHO05D009878 2.5e-06 56.6 164 35.4
Aa31LG4G17080 Aethionema arabicum HOM05D011481 ORTHO05D009878 5.7e-06 55.5 143 37.1
PGR044G1447 Punica granatum HOM05D011481 ORTHO05D009878 5.7e-06 55.5 198 29.8
AL5G27920 Arabidopsis lyrata HOM05D011481 ORTHO05D009878 7.4e-06 55.1 140 35.7
Atru.chr3.667 Acer truncatum HOM05D008121 ORTHO05D009878 9.7e-06 54.7 74 48.6
AT3G48490 Arabidopsis thaliana HOM05D011481 ORTHO05D009878 9.7e-06 54.7 140 36.4
VMungo1215G2720 Vigna mungo HOM05D000290 ORTHO05D004630 9.7e-06 54.7 189 31.7


User provided reference genes

Program Settings