Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p003231 Quercus lobata HOM05D005744 ORTHO05D007503 2.5e-68 261.9 127 100.0
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 1.2e-54 216.5 117 88.9
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 5.1e-45 184.5 117 75.2
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 4.3e-44 181.4 117 73.5
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 4.3e-44 181.4 117 73.5
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 9.6e-44 180.3 117 74.4
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 1.3e-43 179.9 117 72.6
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 4.8e-43 177.9 118 73.7
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 8.1e-43 177.2 118 73.7
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 8.1e-43 177.2 117 71.8
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 8.1e-43 177.2 117 72.6
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 1.4e-42 176.4 117 72.6
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 5.3e-42 174.5 117 72.6
GSVIVG01008540001 Vitis vinifera HOM05D005744 ORTHO05D007503 5.3e-42 174.5 117 72.6
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 6.9e-42 174.1 116 70.7
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 1.5e-41 172.9 116 69.0
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 2.0e-41 172.6 116 71.6
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 2.6e-41 172.2 117 71.8
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 5.8e-41 171.0 116 69.0
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 7.6e-41 170.6 117 69.2
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 1.7e-40 169.5 117 65.8
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 2.9e-40 168.7 117 68.4
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 2.9e-40 168.7 117 68.4
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 2.9e-40 168.7 117 69.2
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 6.4e-40 167.5 117 68.4
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 8.4e-40 167.2 119 68.1
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.4e-39 166.4 116 69.8
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.4e-39 166.4 116 69.8
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 2.4e-39 165.6 117 68.4
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 3.2e-39 165.2 117 69.2
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 3.2e-39 165.2 117 69.2
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 4.2e-39 164.9 117 68.4
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 4.2e-39 164.9 116 68.1
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 5.4e-39 164.5 118 65.3
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 9.3e-39 163.7 116 68.1
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 1.6e-38 162.9 117 66.7
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 1.6e-38 162.9 117 66.7
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 2.1e-38 162.5 117 66.7
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 4.6e-38 161.4 117 66.7
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 6.0e-38 161.0 117 65.8
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 7.9e-38 160.6 117 66.7
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 1.8e-37 159.5 117 61.5
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 1.8e-37 159.5 117 66.7
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 2.3e-37 159.1 117 65.0
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 3.9e-37 158.3 117 64.1
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 5.1e-37 157.9 108 71.3
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 8.7e-37 157.1 115 66.1
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 8.7e-37 157.1 115 68.7
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 1.1e-36 156.8 120 64.2
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.1e-36 156.8 115 67.8
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 1.5e-36 156.4 116 64.7
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 1.9e-36 156.0 117 65.0
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 2.5e-36 155.6 117 68.4
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 2.5e-36 155.6 116 62.1
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 3.3e-36 155.2 117 60.7
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 4.3e-36 154.8 117 63.2
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 4.3e-36 154.8 117 60.7
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 4.3e-36 154.8 115 67.8
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 5.6e-36 154.5 115 67.8
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 7.4e-36 154.1 117 66.7
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 7.4e-36 154.1 117 65.0
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 9.6e-36 153.7 117 63.2
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 1.6e-35 152.9 115 63.5
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 6.2e-35 151.0 117 65.0
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 6.2e-35 151.0 117 65.0
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 6.2e-35 151.0 117 59.8
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 8.1e-35 150.6 117 61.5
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 1.8e-34 149.4 117 64.1
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.8e-34 149.4 117 64.1
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 4.0e-34 148.3 115 61.7
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 4.0e-34 148.3 128 60.2
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 4.0e-34 148.3 128 60.2
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 6.9e-34 147.5 117 60.7
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 9.0e-34 147.1 117 59.8
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 1.5e-33 146.4 117 57.3
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 2.6e-33 145.6 115 60.0
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 3.4e-33 145.2 117 56.4
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 7.6e-33 144.1 115 60.0
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 7.6e-33 144.1 115 60.0
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 9.9e-33 143.7 115 60.9
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 1.3e-32 143.3 115 58.3
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 1.3e-32 143.3 118 62.7
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 2.2e-32 142.5 117 57.3
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 2.9e-32 142.1 117 56.4
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 4.9e-32 141.4 139 53.2
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 6.4e-32 141.0 115 59.1
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 1.4e-31 139.8 117 61.5
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 1.9e-31 139.4 101 61.4
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 2.4e-31 139.0 105 62.9
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 9.3e-31 137.1 155 50.3
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 9.3e-31 137.1 115 57.4
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 1.2e-30 136.7 117 55.6
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 4.3e-28 128.3 81 74.1
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 1.1e-26 123.6 116 50.9
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 1.8e-26 122.9 108 57.4
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 4.0e-26 121.7 85 69.4
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 5.8e-25 117.9 115 53.0
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 4.2e-23 111.7 101 55.4
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 4.2e-23 111.7 79 67.1
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 5.5e-23 111.3 79 65.8
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 7.1e-23 110.9 78 62.8
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 1.6e-22 109.8 80 63.8
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 3.0e-21 105.5 78 65.4
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 1.5e-20 103.2 117 48.7
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 2.5e-20 102.4 83 59.0
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 3.3e-20 102.1 114 49.1
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 3.3e-20 102.1 107 48.6
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 4.1e-18 95.1 108 45.4
TAR629G1577 Trochodendron aralioides HOM05D005744 ORTHO05D007503 1.5e-17 93.2 59 69.5
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 1.9e-12 76.3 111 37.8
SEGI_17145 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 5.3e-10 68.2 59 59.3
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 3.2e-07 58.9 121 30.6


User provided reference genes

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