Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.8e-142 509.2 248 100.0
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 8.8e-102 374.0 251 76.9
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 2.6e-101 372.5 250 76.4
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 5.7e-101 371.3 255 76.1
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 2.2e-100 369.4 251 73.7
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 9.1e-99 364.0 251 74.9
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 2.7e-98 362.5 254 73.6
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.5e-98 362.1 251 74.5
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 4.5e-98 361.7 251 73.7
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 7.7e-98 360.9 247 74.5
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.0e-97 360.5 249 73.9
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 1.7e-97 359.8 252 73.8
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.7e-97 359.8 251 73.7
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.8e-97 358.6 251 74.1
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.8e-97 358.6 251 74.1
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 6.6e-97 357.8 254 75.2
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 8.6e-97 357.5 251 73.3
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.1e-96 357.1 250 72.8
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.5e-96 356.7 252 72.2
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.5e-96 355.9 250 72.4
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 4.2e-96 355.1 253 71.9
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 2.1e-95 352.8 252 73.0
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 3.6e-95 352.1 251 73.7
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.6e-95 352.1 251 72.1
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 4.7e-95 351.7 250 71.2
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 4.7e-95 351.7 251 70.5
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 8.0e-95 350.9 251 73.3
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.8e-94 349.7 251 72.5
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.8e-94 349.7 247 71.7
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 2.3e-94 349.4 249 71.5
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 5.2e-94 348.2 250 73.6
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 6.8e-94 347.8 251 70.1
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 1.2e-93 347.1 251 69.7
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.5e-93 346.7 250 73.2
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 2.0e-93 346.3 247 70.0
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 2.6e-93 345.9 250 70.4
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 3.4e-93 345.5 250 72.8
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 3.4e-93 345.5 251 70.9
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 7.5e-93 344.4 247 72.5
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 9.8e-93 344.0 247 70.4
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.3e-92 343.6 247 70.0
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.3e-92 343.6 247 70.0
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.7e-92 343.2 252 69.8
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.2e-92 342.8 251 70.1
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 2.2e-92 342.8 251 69.7
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.8e-92 342.4 251 70.1
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 3.7e-92 342.0 247 70.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 3.7e-92 342.0 247 70.0
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 4.9e-92 341.7 247 69.6
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 4.9e-92 341.7 247 69.6
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 6.3e-92 341.3 248 69.4
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 8.3e-92 340.9 254 68.9
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 8.3e-92 340.9 251 69.7
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 1.4e-91 340.1 236 75.0
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.8e-91 339.7 250 71.6
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 2.4e-91 339.3 247 69.6
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 5.4e-91 338.2 247 69.6
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 5.4e-91 338.2 250 70.8
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.2e-90 337.0 247 69.6
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 1.2e-90 337.0 249 69.9
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 2.7e-90 335.9 248 69.0
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 3.5e-90 335.5 258 67.8
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 3.5e-90 335.5 250 69.2
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 2.3e-89 332.8 251 70.9
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 2.3e-89 332.8 251 67.7
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 6.6e-89 331.3 250 67.6
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 6.6e-89 331.3 262 67.9
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 6.6e-89 331.3 247 68.0
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 2.5e-88 329.3 247 67.2
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 3.3e-88 328.9 260 65.8
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 4.3e-88 328.6 270 64.4
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 5.6e-88 328.2 235 71.5
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 9.5e-88 327.4 255 67.1
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 9.5e-88 327.4 252 68.3
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 3.6e-87 325.5 249 65.1
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-87 325.1 272 64.3
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 3.1e-86 322.4 283 61.1
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 8.9e-86 320.9 231 72.3
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.3e-84 317.0 254 65.7
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 4.9e-84 315.1 232 68.5
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 4.9e-84 315.1 258 64.0
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 4.9e-84 315.1 253 65.2
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 2.4e-83 312.8 245 66.5
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.6e-82 310.1 236 67.4
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 2.0e-82 309.7 251 64.9
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 5.0e-81 305.1 232 67.2
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 2.5e-80 302.8 234 66.7
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.5e-80 302.8 252 65.5
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 3.3e-80 302.4 258 64.3
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 9.5e-80 300.8 232 66.4
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 6.2e-79 298.1 234 70.9
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 1.4e-78 297.0 252 63.1
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 3.4e-77 292.4 238 65.5
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.1e-75 287.3 265 58.1
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 3.5e-74 282.3 170 81.8
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 2.6e-69 266.2 178 74.7
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.9e-68 262.7 258 56.6
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 8.3e-68 261.2 329 49.2
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.4e-67 259.6 202 61.4
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 5.4e-67 258.5 244 59.8
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 1.0e-65 254.2 194 66.0
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 8.6e-65 251.1 252 56.3
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.9e-64 250.0 203 61.6
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 8.1e-63 244.6 152 77.6
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 4.0e-62 242.3 152 77.6
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.6e-61 239.6 252 54.0
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.3e-60 237.3 173 68.2
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 2.1e-55 219.9 171 70.2
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.8e-54 216.9 149 71.8
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 6.9e-54 214.9 189 54.5
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 2.5e-48 196.4 136 61.8
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 3.3e-40 169.5 165 53.3
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 5.8e-37 158.7 160 52.5
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 6.0e-34 148.7 185 42.2
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 4.5e-29 132.5 63 93.7
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.3e-25 120.9 63 82.5
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.3e-25 120.2 89 66.3
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 2.4e-22 110.2 118 51.7
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.1e-22 109.4 112 51.8
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.9e-20 103.2 94 63.8
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 1.5e-16 90.9 169 37.3


User provided reference genes

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