Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 1.0e-224 783.1 412 100.0
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 7.8e-95 351.7 422 50.9
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 6.2e-84 315.5 417 47.2
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 8.1e-84 315.1 419 47.7
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 2.6e-82 310.1 418 47.8
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 2.2e-81 307.0 425 47.1
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 2.2e-81 307.0 425 47.1
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 7.8e-79 298.5 450 42.9
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 6.6e-78 295.4 429 44.8
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 1.9e-77 293.9 410 44.6
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 2.5e-77 293.5 407 49.1
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 4.3e-77 292.7 417 45.8
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 7.3e-77 292.0 420 44.5
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 4.0e-75 286.2 420 44.5
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 9.0e-75 285.0 420 45.0
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 9.0e-75 285.0 420 45.0
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 8.4e-73 278.5 422 44.3
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 8.7e-70 268.5 413 44.3
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 2.8e-68 263.5 376 43.6
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 3.6e-68 263.1 413 41.6
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 3.6e-68 263.1 403 42.9
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 8.1e-68 261.9 426 38.5
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 6.9e-67 258.8 427 43.1
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.4e-66 256.5 404 42.3
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 2.2e-65 253.8 373 44.5
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 4.2e-64 249.6 395 40.3
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 2.7e-63 246.9 406 40.6
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 2.7e-63 246.9 406 40.6
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 3.5e-63 246.5 404 40.8
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 3.5e-63 246.5 404 41.1
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 3.5e-63 246.5 402 39.8
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 6.0e-63 245.7 394 40.4
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 7.9e-63 245.4 399 41.1
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 7.9e-63 245.4 406 41.6
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 2.3e-62 243.8 427 39.6
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 7.4e-61 238.8 396 40.9
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 9.6e-61 238.4 392 40.1
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 9.6e-61 238.4 395 39.7
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.1e-60 237.3 373 41.6
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 2.8e-60 236.9 395 39.7
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 8.1e-60 235.3 401 39.7
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 5.8e-58 229.2 401 37.7
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 1.4e-56 224.6 401 39.4
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 9.3e-56 221.9 400 37.0
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 2.7e-55 220.3 404 38.1
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 7.9e-55 218.8 397 37.5
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.0e-54 216.9 375 40.8
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 5.1e-54 216.1 392 38.8
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 2.5e-53 213.8 310 44.5
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 3.3e-53 213.4 337 39.2
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 1.1e-48 198.4 402 35.1
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 1.9e-48 197.6 363 39.1
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 1.9e-48 197.6 357 39.8
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 3.2e-48 196.8 309 42.4
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 1.8e-46 191.0 220 51.4
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.1e-45 188.3 373 38.1
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 3.3e-45 186.8 413 34.6
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 9.7e-45 185.3 332 38.6
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 1.7e-41 174.5 253 43.5
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 1.5e-37 161.4 334 35.0
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 2.6e-13 80.9 324 28.1
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 9.8e-13 79.0 192 33.9
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 1.3e-09 68.6 73 50.7


User provided reference genes

Program Settings