Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p053831 Quercus lobata HOM05D010068 ORTHO05D010968 3.3e-247 857.8 405 100.0
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 5.2e-27 126.3 329 28.9
vmacro23372 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 3.9e-22 110.2 318 29.6
vmacro07191 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 6.6e-22 109.4 318 29.6
vmacro21216 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 9.6e-21 105.5 183 36.1
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 4.9e-17 93.2 331 28.1
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 3.0e-14 84.0 294 28.6
Sopen05g014240 Solanum pennellii HOM05D000014 ORTHO05D000016 2.5e-13 80.9 314 25.5
TAR275G0001 Trochodendron aralioides HOM05D032489 ORTHO05D001786 2.5e-13 80.9 298 25.8
Sopen01g017450 Solanum pennellii HOM05D002047 ORTHO05D001422 5.6e-13 79.7 367 24.0
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 9.6e-13 79.0 378 24.6
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.8e-12 77.4 294 27.2
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 1.4e-11 75.1 375 24.5
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 1.4e-11 75.1 381 24.1
CSS0049203 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 5.3e-11 73.2 233 27.5
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 5.3e-11 73.2 289 28.4
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 9.0e-11 72.4 296 26.7
CSS0038202 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.4e-10 70.5 171 28.7
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 4.5e-10 70.1 350 24.0
CSS0032941 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 5.8e-10 69.7 168 31.5
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 9.9e-10 68.9 299 26.4
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 2.2e-09 67.8 423 22.7
CSS0021942 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.9e-09 67.4 180 28.9
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.9e-09 67.4 291 25.8
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 3.8e-09 67.0 202 28.7
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 3.8e-09 67.0 177 31.1
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 3.8e-09 67.0 414 22.2
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 4.9e-09 66.6 381 23.4
CSS0049128 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 6.4e-09 66.2 178 31.5
PGSC0003DMG400016492 Solanum tuberosum HOM05D002047 ORTHO05D001422 1.4e-08 65.1 182 28.0
Dinv04834 Davidia involucrata HOM05D012821 ORTHO05D001422 5.4e-08 63.2 195 27.7
PGR044G2228 Punica granatum HOM05D013472 ORTHO05D015108 5.4e-08 63.2 197 23.4
CSS0003496 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.2e-07 62.0 139 33.8
PGR119G2091 Punica granatum HOM05D013472 ORTHO05D015108 1.2e-07 62.0 197 23.4
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 1.2e-07 62.0 377 22.8
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 1.6e-07 61.6 137 35.0
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 1.6e-07 61.6 217 25.8
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-07 61.2 381 23.1
Sopen11g022440 Solanum pennellii HOM05D000047 ORTHO05D000589 3.5e-07 60.5 133 33.1
CSS0016209 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 4.6e-07 60.1 147 32.0
CSS0037510 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 4.6e-07 60.1 136 33.8
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-07 59.7 298 23.8
CSS0039917 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 7.9e-07 59.3 179 28.5
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-06 58.5 177 27.7


User provided reference genes

Program Settings