Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p053792 Quercus lobata HOM05D014542 ORTHO05D000152 1.0e-182 643.3 324 100.0
QL11p047905 Quercus lobata HOM05D014542 ORTHO05D000152 5.1e-182 641.0 324 99.7
QL02p096292 Quercus lobata HOM05D014542 ORTHO05D007045 1.8e-179 632.5 321 99.4
QL05p045625 Quercus lobata HOM05D014542 ORTHO05D000152 2.6e-178 628.6 324 98.1
QL09p011162 Quercus lobata HOM05D014542 ORTHO05D000152 9.0e-155 550.4 283 98.2
QL04p026871 Quercus lobata HOM05D014542 ORTHO05D000152 2.9e-121 439.1 229 97.8
QL01p054457 Quercus lobata HOM05D014542 ORTHO05D000152 1.2e-119 433.7 229 96.5
QL10p013300 Quercus lobata HOM05D014542 ORTHO05D000152 4.9e-92 342.0 177 96.0
QL04p024009 Quercus lobata HOM05D000264 ORTHO05D000152 1.1e-40 171.4 189 50.8
QL04p023633 Quercus lobata HOM05D014542 ORTHO05D000152 6.0e-34 149.1 189 47.1
QL01p018981 Quercus lobata HOM05D000264 ORTHO05D000152 1.8e-33 147.5 142 58.5
QL02p056100 Quercus lobata HOM05D000264 ORTHO05D000152 1.1e-22 111.7 153 43.8
QL05p018838 Quercus lobata HOM05D000264 ORTHO05D000152 1.1e-22 111.7 153 43.8
QL05p018975 Quercus lobata HOM05D000264 ORTHO05D000152 1.1e-22 111.7 153 43.8
QL01p005925 Quercus lobata HOM05D014542 ORTHO05D000152 1.1e-16 91.7 152 40.8
QL01p006014 Quercus lobata HOM05D000264 ORTHO05D000152 2.0e-16 90.9 151 38.4
QL01p006033 Quercus lobata HOM05D000264 ORTHO05D000152 7.4e-16 89.0 152 41.4
CSS0040861 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.2e-13 81.6 138 35.5
Dinv02172 Davidia involucrata HOM05D000264 ORTHO05D000152 1.7e-12 77.8 151 35.1
Dinv02173 Davidia involucrata HOM05D000264 ORTHO05D000152 5.5e-11 72.8 146 34.9
Sc06g0005980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 7.2e-11 72.4 191 33.0
Sc06g0006110 Simmondsia chinensis HOM05D000264 ORTHO05D000152 2.7e-10 70.5 138 37.0
THA.LOC104801174 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 1.0e-09 68.6 162 33.3
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.4e-09 68.2 131 33.6
Lj1C726T14 Lonicera japonica HOM05D000264 ORTHO05D000152 1.8e-09 67.8 149 36.9
CSS0035240 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.9e-09 66.6 163 34.4
Sc07g0003560 Simmondsia chinensis HOM05D000264 ORTHO05D000152 3.9e-09 66.6 159 34.0
Sc07g0003540 Simmondsia chinensis HOM05D000264 ORTHO05D000152 5.1e-09 66.2 201 30.3
Rhsim06G0145100 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.1e-08 65.1 162 31.5
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.1e-08 65.1 155 31.0
Prupe.4G145300 Prunus persica HOM05D000264 ORTHO05D000152 2.6e-08 63.9 143 32.2
Zm00001eb215410 Zea mays HOM05D000264 ORTHO05D000152 2.6e-08 63.9 120 35.8
GSVIVG01013597001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.3e-08 63.5 93 38.7
TAR624G0511 Trochodendron aralioides HOM05D000264 ORTHO05D000152 7.4e-08 62.4 98 38.8
Rhsim06G0144300 Rhododendron simsii HOM05D000264 ORTHO05D000152 9.7e-08 62.0 160 30.6
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.3e-07 61.6 133 32.3
CARHR100500 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.7e-07 61.2 157 31.2
Actinidia11043 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.2e-07 60.8 133 36.1
CSS0003414 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.8e-07 60.5 171 30.4
Dinv44627 Davidia involucrata HOM05D000264 ORTHO05D000152 2.8e-07 60.5 150 26.0
GSVIVG01001633001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.8e-07 60.5 95 35.8
CSS0045559 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.7e-07 60.1 140 32.9
Prupe.4G144700 Prunus persica HOM05D000264 ORTHO05D000152 4.8e-07 59.7 148 27.7
EL10Ac2g04709 Beta vulgaris HOM05D007624 ORTHO05D010285 6.3e-07 59.3 129 31.0
Dinv29923 Davidia involucrata HOM05D000264 ORTHO05D000152 1.1e-06 58.5 115 31.3
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 1.1e-06 58.5 156 29.5
CARHR002990 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.4e-06 58.2 147 31.3
Eucgr.K00973 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.4e-06 58.2 132 33.3
vmacro12288 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.8e-06 57.8 138 33.3
CSS0028437 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.4e-06 57.4 133 30.1
AT4G03490 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 4.1e-06 56.6 169 29.0
Cc11_g07210 Coffea canephora HOM05D000264 ORTHO05D000152 4.1e-06 56.6 145 31.7
RcHm_v2.0_Chr2g0109301 Rosa chinensis HOM05D000264 ORTHO05D000152 4.1e-06 56.6 144 29.9
Eucgr.K01000 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.3e-06 56.2 128 33.6
BcaB01g01946 Brassica carinata HOM05D000264 ORTHO05D000152 7.0e-06 55.8 164 29.9
Ah.08g218070 Amaranthus hybridus HOM05D007624 ORTHO05D010285 9.1e-06 55.5 94 36.2
CSS0009763 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 9.1e-06 55.5 132 33.3
GSVIVG01020905001 Vitis vinifera HOM05D000264 ORTHO05D000152 9.1e-06 55.5 157 30.6


User provided reference genes

Program Settings