Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 5.3e-122 441.0 223 100.0
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 8.8e-93 344.0 227 81.9
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 7.5e-68 261.2 145 91.7
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 1.0e-56 224.2 177 71.2
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 6.0e-49 198.4 232 51.3
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.9e-47 193.4 170 61.8
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 6.2e-46 188.3 237 47.3
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.3e-45 186.4 233 48.1
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 7.6e-44 181.4 232 47.0
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 8.4e-43 177.9 226 48.7
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 1.4e-42 177.2 223 47.1
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 2.1e-41 173.3 223 51.1
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 1.5e-39 167.2 223 44.8
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 3.3e-39 166.0 225 47.1
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 4.3e-39 165.6 206 49.0
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 9.6e-39 164.5 226 46.0
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 9.6e-39 164.5 227 46.7
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 9.6e-39 164.5 238 44.1
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.6e-38 163.7 187 51.9
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.8e-38 162.9 225 46.2
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.8e-38 162.9 216 45.8
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.4e-37 160.6 224 44.6
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 3.1e-37 159.5 179 50.3
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 6.9e-37 158.3 183 49.7
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 8.9e-37 157.9 180 50.6
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 1.5e-36 157.1 229 45.0
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.5e-36 157.1 176 49.4
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.0e-36 156.8 238 42.9
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 2.6e-36 156.4 147 55.8
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 5.8e-36 155.2 226 42.9
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 1.3e-35 154.1 140 56.4
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 1.3e-35 154.1 233 40.8
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 2.9e-35 152.9 233 44.2
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 2.9e-35 152.9 231 42.4
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 2.9e-35 152.9 233 45.1
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 4.9e-35 152.1 245 41.6
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 6.4e-35 151.8 141 56.0
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.4e-35 151.8 226 43.4
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.1e-34 151.0 233 44.6
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 2.4e-34 149.8 225 43.6
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 3.2e-34 149.4 236 43.2
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 4.2e-34 149.1 229 41.0
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 4.2e-34 149.1 234 44.4
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 4.2e-34 149.1 223 44.4
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 9.3e-34 147.9 226 42.5
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 1.6e-33 147.1 234 40.2
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 2.7e-33 146.4 222 45.0
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 2.7e-33 146.4 206 42.2
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 3.5e-33 146.0 224 42.9
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 7.8e-33 144.8 226 42.9
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 1.0e-32 144.4 145 51.0
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.7e-32 143.7 226 42.5
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 1.7e-32 143.7 224 41.1
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.3e-32 143.3 221 42.5
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 8.7e-32 141.4 226 41.2
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 8.7e-32 141.4 224 41.5
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 1.1e-31 141.0 187 47.6
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.9e-31 140.2 282 36.5
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 2.5e-31 139.8 208 41.8
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 2.5e-31 139.8 176 47.7
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 3.3e-31 139.4 238 39.5
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 3.3e-31 139.4 228 41.7
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.6e-30 137.1 169 47.3
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 2.1e-30 136.7 228 41.2
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 3.6e-30 136.0 222 41.0
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 4.8e-30 135.6 221 41.2
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 8.1e-30 134.8 222 41.0
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 1.8e-29 133.7 225 38.2
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.8e-29 133.7 98 66.3
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 4.0e-29 132.5 227 39.6
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 4.0e-29 132.5 222 39.6
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 6.9e-29 131.7 222 41.0
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.2e-28 131.0 171 44.4
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 1.5e-28 130.6 238 38.2
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 2.0e-28 130.2 221 38.9
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 3.4e-28 129.4 100 64.0
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 3.4e-28 129.4 222 40.5
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 4.5e-28 129.0 105 66.7
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 7.6e-28 128.3 230 37.4
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 7.6e-28 128.3 234 39.3
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.7e-27 127.1 186 44.1
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 2.9e-27 126.3 241 38.2
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 4.9e-27 125.6 100 65.0
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-26 122.1 98 62.2
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.2e-25 120.9 217 41.0
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 6.0e-25 118.6 138 48.6
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 1.3e-24 117.5 139 48.2
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.3e-24 116.7 203 42.4
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 5.1e-24 115.5 175 41.1
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 6.7e-24 115.2 188 42.6
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 8.7e-24 114.8 138 47.8
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 2.1e-22 110.2 92 63.0
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 2.8e-22 109.8 96 56.2
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 1.1e-21 107.8 138 46.4
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.9e-19 99.8 81 61.7
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 4.9e-19 99.0 226 35.0
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 4.9e-19 99.0 226 35.0
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.1e-13 81.3 143 35.7
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 2.0e-12 77.0 95 41.1
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 1.6e-09 67.4 146 31.5
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 6.0e-09 65.5 181 34.3
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 3.0e-08 63.2 64 43.8
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 2.1e-06 57.0 64 37.5


User provided reference genes

Program Settings