Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p053023 Quercus lobata HOM05D000079 ORTHO05D002610 4.5e-52 207.6 102 100.0
QL09p052145 Quercus lobata HOM05D000079 ORTHO05D002610 3.8e-43 177.9 101 89.1
QL09p053481 Quercus lobata HOM05D000079 ORTHO05D023432 1.6e-25 119.4 137 53.3
Prupe.8G200500 Prunus persica HOM05D000079 ORTHO05D002610 1.4e-16 89.7 137 43.1
Glyma.18G166000 Glycine max HOM05D000079 ORTHO05D002610 3.4e-15 85.1 67 61.2
CSS0025507 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D002610 2.2e-14 82.4 135 37.8
Dinv19186 Davidia involucrata HOM05D000079 ORTHO05D002610 1.4e-13 79.7 135 35.6
TPR.G497 Trifolium pratense HOM05D000079 ORTHO05D002610 1.4e-13 79.7 64 60.9
Actinidia30062 Actinidia chinensis HOM05D000079 ORTHO05D002610 2.4e-13 79.0 135 37.0
Manes.13G046100 Manihot esculenta HOM05D000079 ORTHO05D002610 2.4e-13 79.0 64 60.9
GSVIVG01003277001 Vitis vinifera HOM05D000079 ORTHO05D002610 4.1e-13 78.2 82 51.2
Rhsim13G0046800 Rhododendron simsii HOM05D000079 ORTHO05D002610 9.2e-13 77.0 134 35.8
vmacro02773 Vaccinium macrocarpon HOM05D000079 ORTHO05D002610 2.0e-12 75.9 64 56.2
Phvul.008G130300 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 1.0e-11 73.6 64 56.2
TWI75G0083 Tripterygium wilfordii HOM05D000079 ORTHO05D002610 1.0e-11 73.6 135 35.6
Psat3g148560 Pisum sativum HOM05D000079 ORTHO05D002610 1.3e-11 73.2 137 35.0
Medtr7g056087 Medicago truncatula HOM05D000079 ORTHO05D002610 1.7e-11 72.8 64 57.8
VMungo1383G2754 Vigna mungo HOM05D000079 ORTHO05D002610 1.7e-11 72.8 64 56.2
Ca_20017_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 3.0e-11 72.0 58 62.1
Ca_24131_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 3.0e-11 72.0 58 62.1
SHI24903 Sapria himalayana HOM05D000079 ORTHO05D002610 3.0e-11 72.0 78 43.6
Lalb_Chr19g0125771 Lupinus albus HOM05D000079 ORTHO05D002610 3.9e-11 71.6 64 51.6
PGR083G0209 Punica granatum HOM05D000079 ORTHO05D002610 3.9e-11 71.6 81 49.4
Lj1g0003447 Lotus japonicus HOM05D000079 ORTHO05D002610 1.9e-10 69.3 64 50.0
Nn1g07923 Nelumbo nucifera HOM05D000079 ORTHO05D002610 4.3e-10 68.2 64 54.7
Rhsim12G0108900 Rhododendron simsii HOM05D000273 ORTHO05D000198 4.3e-10 68.2 59 54.2
arahy.Tifrunner.gnm1.ann1.7C0XXZ Arachis hypogaea HOM05D000079 ORTHO05D002610 1.2e-09 66.6 64 48.4
PSO566G0212 Papaver somniferum HOM05D000079 ORTHO05D002610 8.0e-09 63.9 50 64.0
arahy.Tifrunner.gnm1.ann1.47X2VM Arachis hypogaea HOM05D000079 ORTHO05D002610 1.4e-08 63.2 64 45.3
arahy.Tifrunner.gnm1.ann1.FR9YD2 Arachis hypogaea HOM05D000079 ORTHO05D002610 1.2e-07 60.1 64 43.8
Potri.002G244600 Populus trichocarpa HOM05D000079 ORTHO05D002610 2.0e-07 59.3 111 38.7
PSO782G0104 Papaver somniferum HOM05D000079 ORTHO05D002610 2.2e-06 55.8 51 60.8
Aqoxy7G02384 Aquilegia oxysepala HOM05D000079 ORTHO05D000211 4.9e-06 54.7 58 46.6


User provided reference genes

Program Settings