Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 1.4e-122 443.0 221 100.0
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 7.9e-94 347.4 227 81.9
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 5.1e-77 291.6 145 99.3
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 1.0e-61 240.7 230 54.8
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 8.8e-61 237.7 187 69.5
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 9.7e-60 234.2 226 54.4
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 1.6e-57 226.9 220 55.9
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 3.5e-57 225.7 227 55.5
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 8.5e-56 221.1 226 53.1
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 2.5e-55 219.5 217 59.0
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.2e-54 217.2 232 50.4
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 3.6e-54 215.7 217 53.0
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 4.4e-52 208.8 218 50.9
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 5.7e-52 208.4 221 53.8
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 5.7e-52 208.4 217 51.2
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 5.7e-52 208.4 221 55.7
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 7.5e-52 208.0 222 53.2
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.2e-51 206.5 232 49.1
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.3e-51 204.5 222 54.1
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.8e-50 203.4 170 62.4
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 9.1e-50 201.1 239 48.1
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 9.1e-50 201.1 221 51.6
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.7e-49 199.5 215 51.2
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.7e-48 196.8 217 52.1
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 2.2e-48 196.4 224 51.3
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 5.0e-48 195.3 218 49.5
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 5.0e-48 195.3 216 49.5
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 8.5e-48 194.5 260 44.2
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 8.5e-48 194.5 219 49.8
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 3.2e-47 192.6 224 49.6
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 7.2e-47 191.4 210 49.5
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 1.2e-46 190.7 231 47.2
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 4.7e-46 188.7 218 48.6
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.1e-46 188.3 222 50.5
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 6.1e-46 188.3 218 49.5
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 1.4e-45 187.2 230 50.9
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 2.3e-45 186.4 237 47.7
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 2.0e-44 183.3 219 48.4
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 2.6e-44 183.0 229 45.4
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 3.4e-44 182.6 216 51.4
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 7.5e-44 181.4 145 62.1
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 9.8e-44 181.0 204 50.5
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 1.3e-43 180.6 228 48.7
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.7e-43 180.3 196 49.5
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.7e-43 180.3 227 47.6
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.7e-43 180.3 217 46.5
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 2.2e-43 179.9 208 48.6
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 6.3e-43 178.3 227 46.3
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.1e-42 177.6 178 52.8
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.8e-42 176.8 216 50.0
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 2.4e-42 176.4 227 44.9
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 2.4e-42 176.4 221 46.6
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 3.1e-42 176.0 218 46.3
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 4.1e-42 175.6 147 59.9
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 5.4e-42 175.3 220 48.2
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 5.4e-42 175.3 227 47.1
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 7.0e-42 174.9 185 50.8
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.7e-41 172.9 228 43.0
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 1.0e-40 171.0 218 45.0
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 1.3e-40 170.6 220 46.8
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.3e-40 170.6 275 40.4
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.3e-40 169.9 216 44.9
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 2.3e-40 169.9 216 44.4
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 2.3e-40 169.9 140 59.3
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 5.0e-40 168.7 215 44.7
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 7.3e-39 164.9 216 44.4
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 1.2e-38 164.1 217 46.1
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 1.6e-38 163.7 216 43.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 2.1e-38 163.3 216 44.0
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 4.0e-37 159.1 224 42.0
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 1.2e-36 157.5 227 43.6
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 2.0e-36 156.8 229 44.1
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 3.4e-36 156.0 235 40.4
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 3.4e-36 156.0 216 42.6
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 9.8e-36 154.5 169 49.1
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 2.2e-35 153.3 171 48.0
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 2.2e-35 153.3 98 72.4
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 2.9e-35 152.9 237 41.8
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 1.8e-34 150.2 100 71.0
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 2.4e-34 149.8 219 42.0
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 4.1e-34 149.1 225 42.2
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 4.1e-34 149.1 235 39.6
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.0e-33 146.7 213 43.2
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.1e-31 141.0 100 70.0
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 2.5e-31 139.8 181 47.5
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 5.6e-31 138.7 220 41.8
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 5.6e-31 138.7 220 41.8
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 4.7e-30 135.6 214 39.3
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-30 135.2 98 63.3
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 8.0e-30 134.8 186 45.7
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 6.8e-29 131.7 139 50.4
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 3.4e-28 129.4 138 50.0
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 5.8e-28 128.6 200 42.5
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 4.9e-27 125.6 92 67.4
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 6.4e-27 125.2 96 59.4
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 1.6e-25 120.6 142 47.9
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 4.9e-19 99.0 83 57.8
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 2.7e-17 93.2 84 52.4
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 1.9e-15 87.0 86 48.8
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 2.0e-12 77.0 196 28.1
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.1e-10 71.2 184 34.2
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 5.4e-10 68.9 64 46.9
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 8.6e-08 61.6 64 39.1
CSS0037252 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.5e-07 60.8 135 32.6


User provided reference genes

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