Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p051399 Quercus lobata HOM05D005604 ORTHO05D006745 4.7e-82 307.8 149 100.0
QL09p051278 Quercus lobata HOM05D005604 ORTHO05D006745 1.8e-17 93.2 62 79.0
CiPaw.01G050300 Carya illinoinensis HOM05D005604 ORTHO05D006745 2.2e-15 86.3 62 74.2
COL.COLO4_15621 Corchorus olitorius HOM05D005604 ORTHO05D006745 1.9e-14 83.2 62 72.6
Gohir.A07G199300 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.9e-14 83.2 62 72.6
Gohir.D07G205700 Gossypium hirsutum HOM05D005604 ORTHO05D006745 2.4e-14 82.8 70 64.3
Gorai.001G231700 Gossypium raimondii HOM05D005604 ORTHO05D006745 2.4e-14 82.8 70 64.3
CiPaw.02G023400 Carya illinoinensis HOM05D005604 ORTHO05D006745 4.2e-14 82.0 62 71.0
Duzib138G1747 Durio zibethinus HOM05D005604 ORTHO05D006745 5.4e-14 81.6 62 71.0
Ah.15g093490 Amaranthus hybridus HOM05D005604 ORTHO05D006745 2.7e-13 79.3 69 65.2
Thecc.01G220400 Theobroma cacao HOM05D005604 ORTHO05D006745 2.7e-13 79.3 62 69.4
Lj1g0022594 Lotus japonicus HOM05D005604 ORTHO05D006745 6.0e-13 78.2 62 66.1
MBI07_g18990_MAGBIO Magnolia biondii HOM05D005604 ORTHO05D006745 6.0e-13 78.2 59 67.8
Duzib133G0023 Durio zibethinus HOM05D005604 ORTHO05D006745 7.9e-13 77.8 62 69.4
Prupe.8G199200 Prunus persica HOM05D005604 ORTHO05D006745 7.9e-13 77.8 62 67.7
EL10Ac7g17895 Beta vulgaris HOM05D005604 ORTHO05D006745 1.0e-12 77.4 69 63.8
Dinv12653 Davidia involucrata HOM05D005604 ORTHO05D006745 1.0e-12 77.4 63 69.8
AUR62016550 Chenopodium quinoa HOM05D005604 ORTHO05D006745 1.8e-12 76.6 70 65.7
DCAR_004740 Daucus carota HOM05D005604 ORTHO05D006745 2.3e-12 76.3 82 59.8
GSVIVG01003930001 Vitis vinifera HOM05D005604 ORTHO05D006745 2.3e-12 76.3 62 64.5
Haze_15255 Corylus avellana HOM05D005604 ORTHO05D006745 3.0e-12 75.9 87 55.2
CANSAT01G1141 Cannabis sativa HOM05D005604 ORTHO05D006745 3.9e-12 75.5 62 64.5
Glyma.18G167400 Glycine max HOM05D005604 ORTHO05D006745 3.9e-12 75.5 62 64.5
Medtr7g056243 Medicago truncatula HOM05D005604 ORTHO05D006745 3.9e-12 75.5 62 62.9
Potri.002G245700 Populus trichocarpa HOM05D005604 ORTHO05D006745 3.9e-12 75.5 63 66.7
VMungo1383G0872 Vigna mungo HOM05D005604 ORTHO05D006745 3.9e-12 75.5 62 64.5
AUR62001131 Chenopodium quinoa HOM05D005604 ORTHO05D006745 5.1e-12 75.1 70 64.3
FvH4_2g18560 Fragaria vesca HOM05D005604 ORTHO05D006745 5.1e-12 75.1 62 66.1
FAN15G1583 Fragaria x ananassa HOM05D005604 ORTHO05D006745 5.1e-12 75.1 62 66.1
FAN24G1841 Fragaria x ananassa HOM05D005604 ORTHO05D006745 5.1e-12 75.1 62 66.1
Phvul.008G130900 Phaseolus vulgaris HOM05D005604 ORTHO05D006745 5.1e-12 75.1 62 64.5
Hund05575 Selenicereus undatus HOM05D005604 ORTHO05D006745 5.1e-12 75.1 69 60.9
Eucgr.K02139 Eucalyptus grandis HOM05D005604 ORTHO05D006745 6.7e-12 74.7 62 64.5
Lj1A89T69 Lonicera japonica HOM05D005604 ORTHO05D006745 6.7e-12 74.7 63 66.7
Actinidia39432 Actinidia chinensis HOM05D005604 ORTHO05D006745 8.7e-12 74.3 92 48.9
Sabra02G0187000 Salix brachista HOM05D005604 ORTHO05D006745 8.7e-12 74.3 63 65.1
TPR.G6488 Trifolium pratense HOM05D005604 ORTHO05D006745 8.7e-12 74.3 62 62.9
Actinidia30055 Actinidia chinensis HOM05D005604 ORTHO05D006745 1.1e-11 73.9 63 65.1
Glyma.08G349100 Glycine max HOM05D005604 ORTHO05D006745 1.1e-11 73.9 62 62.9
Rhsim13G0047500 Rhododendron simsii HOM05D005604 ORTHO05D006745 1.1e-11 73.9 60 68.3
MD10G1160100 Malus domestica HOM05D005604 ORTHO05D006745 1.5e-11 73.6 62 62.9
Dinv19175 Davidia involucrata HOM05D005604 ORTHO05D006745 1.9e-11 73.2 63 66.7
CSS0000075 Camellia sinensis var. sinensis HOM05D005604 ORTHO05D006745 3.3e-11 72.4 63 65.1
RcHm_v2.0_Chr6g0284121 Rosa chinensis HOM05D005604 ORTHO05D006745 3.3e-11 72.4 62 64.5
TAR362G0631 Trochodendron aralioides HOM05D005604 ORTHO05D006745 3.3e-11 72.4 69 59.4
Psat3g148680 Pisum sativum HOM05D005604 ORTHO05D006745 4.3e-11 72.0 62 61.3
ClCG09G008600 Citrullus lanatus HOM05D005604 ORTHO05D006745 5.6e-11 71.6 60 66.7
FAN27G1924 Fragaria x ananassa HOM05D005604 ORTHO05D006745 5.6e-11 71.6 62 64.5
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea HOM05D005604 ORTHO05D006745 7.4e-11 71.2 63 63.5
Sed0019682 Sechium edule HOM05D005604 ORTHO05D006745 7.4e-11 71.2 60 65.0
vmacro02782 Vaccinium macrocarpon HOM05D005604 ORTHO05D006745 7.4e-11 71.2 60 65.0
MELO3C021083.2 Cucumis melo HOM05D005604 ORTHO05D006745 9.6e-11 70.9 60 66.7
CsaV3_7G026370 Cucumis sativus L. HOM05D005604 ORTHO05D006745 9.6e-11 70.9 60 66.7
Ciclev10019544m.g Citrus clementina HOM05D005604 ORTHO05D006745 1.3e-10 70.5 63 65.1
DCAR_004736 Daucus carota HOM05D005604 ORTHO05D006745 1.6e-10 70.1 63 65.1
Atru.chr6.1423 Acer truncatum HOM05D005604 ORTHO05D006745 2.1e-10 69.7 63 65.1
ECA236G4946 Erigeron canadensis HOM05D005604 ORTHO05D006745 2.8e-10 69.3 62 64.5
Migut.D00766 Erythranthe guttata HOM05D005604 ORTHO05D006745 4.8e-10 68.6 61 67.2
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea HOM05D005604 ORTHO05D006745 8.1e-10 67.8 63 61.9
PSO063G0087 Papaver somniferum HOM05D005604 ORTHO05D006745 8.1e-10 67.8 61 60.7
TAR633G2144 Trochodendron aralioides HOM05D005604 ORTHO05D006745 8.1e-10 67.8 59 62.7
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.1e-09 67.4 63 60.3
Aqoxy2G03983 Aquilegia oxysepala HOM05D005604 ORTHO05D006745 1.4e-09 67.0 59 59.3
Cpa.g.sc43.114 Carica papaya HOM05D005604 ORTHO05D006745 1.4e-09 67.0 63 61.9
PSO017G3308 Papaver somniferum HOM05D005604 ORTHO05D006745 1.8e-09 66.6 61 60.7
HanXRQChr04g0108051 Helianthus annuus HOM05D005604 ORTHO05D006745 4.0e-09 65.5 62 62.9
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 4.0e-09 65.5 63 61.9
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 4.0e-09 65.5 63 58.7
TWI18G0325 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 4.0e-09 65.5 63 58.7
MD05G1171800 Malus domestica HOM05D005604 ORTHO05D006745 5.3e-09 65.1 62 58.1
Lsat_1_v5_gn_8_89380 Lactuca sativa HOM05D005604 ORTHO05D006745 6.9e-09 64.7 65 60.0
TWI36G0921 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 9.0e-09 64.3 63 58.7
Lalb_Chr13g0291101 Lupinus albus HOM05D005604 ORTHO05D006745 1.5e-08 63.5 64 59.4
PGSC0003DMG400027951 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.5e-08 63.5 62 54.8
DCAR_012669 Daucus carota HOM05D005604 ORTHO05D006745 2.6e-08 62.8 60 56.7
Peaxi162Scf01312g00047 Petunia axillaris HOM05D005604 ORTHO05D006745 3.4e-08 62.4 63 55.6
MSTRG.18511 Avicennia marina HOM05D005604 ORTHO05D006745 4.5e-08 62.0 60 56.7
Manes.13G049200 Manihot esculenta HOM05D005604 ORTHO05D006745 5.8e-08 61.6 63 55.6
Nitab4.5_0003020g0080 Nicotiana tabacum HOM05D005604 ORTHO05D006745 9.9e-08 60.8 60 55.0
QL09p051344 Quercus lobata HOM05D005604 ORTHO05D006745 9.9e-08 60.8 49 61.2
HanXRQChr10g0279511 Helianthus annuus HOM05D005604 ORTHO05D006745 1.3e-07 60.5 81 48.1
CAN.G874.4 Capsicum annuum HOM05D005604 ORTHO05D006745 1.7e-07 60.1 60 53.3
PGR044G1204 Punica granatum HOM05D005604 ORTHO05D006745 1.7e-07 60.1 63 57.1
Sopen06g034740 Solanum pennellii HOM05D005604 ORTHO05D006745 2.2e-07 59.7 60 53.3
Solyc06g083370.3 Solanum lycopersicum HOM05D005604 ORTHO05D006745 2.9e-07 59.3 60 53.3
PGSC0003DMG400020164 Solanum tuberosum HOM05D005604 ORTHO05D006745 2.9e-07 59.3 60 53.3
Nitab4.5_0009005g0020 Nicotiana tabacum HOM05D005604 ORTHO05D006745 4.9e-07 58.5 60 53.3
Lsat_1_v5_gn_9_15140 Lactuca sativa HOM05D005604 ORTHO05D006745 6.4e-07 58.2 87 48.3
THA.LOC104822492 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 6.4e-07 58.2 64 57.8
CAN.G1432.2 Capsicum annuum HOM05D005604 ORTHO05D006745 8.4e-07 57.8 51 60.8
Peaxi162Scf00068g02416 Petunia axillaris HOM05D005604 ORTHO05D006745 8.4e-07 57.8 64 56.2


User provided reference genes

Program Settings