Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p051354 Quercus lobata HOM05D000480 ORTHO05D000313 1.2e-127 459.9 246 100.0
QL06p034440 Quercus lobata HOM05D000480 ORTHO05D000313 1.3e-113 413.3 245 93.1
QL09p051310 Quercus lobata HOM05D000480 ORTHO05D000313 1.1e-112 410.2 246 89.8
QL09p051419 Quercus lobata HOM05D000480 ORTHO05D000313 6.1e-103 377.9 246 86.6
QL09p051476 Quercus lobata HOM05D000480 ORTHO05D000313 1.7e-100 369.8 244 84.8
QL01p008896 Quercus lobata HOM05D000480 ORTHO05D000313 2.4e-43 179.9 238 50.0
QL01p008910 Quercus lobata HOM05D000480 ORTHO05D000313 1.1e-40 171.0 236 48.3
QL08p043468 Quercus lobata HOM05D000480 ORTHO05D000313 1.9e-35 153.7 237 45.6
QL08p043484 Quercus lobata HOM05D000480 ORTHO05D000313 5.1e-33 145.6 186 47.3
QL01p008905 Quercus lobata HOM05D000480 ORTHO05D000313 6.6e-33 145.2 183 50.8
QL01p008880 Quercus lobata HOM05D000480 ORTHO05D000313 3.3e-32 142.9 213 47.4
QL01p009178 Quercus lobata HOM05D000480 ORTHO05D000313 3.3e-32 142.9 213 47.4
QL01p008575 Quercus lobata HOM05D000480 ORTHO05D000313 1.3e-25 120.9 163 44.8
QL01p009420 Quercus lobata HOM05D000480 ORTHO05D000313 3.1e-22 109.8 256 37.9
QL01p007528 Quercus lobata HOM05D000480 ORTHO05D000313 4.0e-22 109.4 250 37.6
QL01p009608 Quercus lobata HOM05D000480 ORTHO05D000313 9.3e-19 98.2 232 36.6
QL01p009236 Quercus lobata HOM05D000480 ORTHO05D000313 1.8e-14 84.0 240 33.8
Cfa004479 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.1e-14 83.2 238 34.0
QL01p008862 Quercus lobata HOM05D000480 ORTHO05D000313 9.0e-14 81.6 184 36.4
QL04p000543 Quercus lobata HOM05D000480 ORTHO05D000313 2.6e-13 80.1 239 34.3
Cfa012310 Carpinus fangiana HOM05D000480 ORTHO05D000313 5.8e-13 79.0 208 32.7
Cfa012319 Carpinus fangiana HOM05D000480 ORTHO05D000313 7.6e-13 78.6 226 31.4
QL01p008822 Quercus lobata HOM05D000480 ORTHO05D000313 2.2e-12 77.0 216 36.6
Lj1g0008219 Lotus japonicus HOM05D000480 ORTHO05D000313 8.4e-12 75.1 213 32.4
QL04p002217 Quercus lobata HOM05D000480 ORTHO05D000313 1.1e-11 74.7 199 33.2
QL10p001466 Quercus lobata HOM05D000480 ORTHO05D000313 1.1e-11 74.7 259 32.8
Cfa021225 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.4e-11 74.3 145 36.6
QL01p009318 Quercus lobata HOM05D000480 ORTHO05D000313 1.4e-11 74.3 239 31.8
CiPaw.11G073200 Carya illinoinensis HOM05D000480 ORTHO05D000313 4.2e-11 72.8 207 29.0
QL10p001535 Quercus lobata HOM05D000480 ORTHO05D000313 4.2e-11 72.8 244 32.8
TPR.G13724 Trifolium pratense HOM05D000480 ORTHO05D000313 4.2e-11 72.8 226 31.9
CiPaw.11G073600 Carya illinoinensis HOM05D000480 ORTHO05D000313 7.1e-11 72.0 238 31.5
arahy.Tifrunner.gnm1.ann1.JBU02Z Arachis hypogaea HOM05D000480 ORTHO05D000313 2.7e-10 70.1 214 31.3
QL04p002360 Quercus lobata HOM05D000480 ORTHO05D000313 2.7e-10 70.1 293 31.1
QL04p002304 Quercus lobata HOM05D000480 ORTHO05D000313 3.5e-10 69.7 180 33.3
Glyma.12G162927 Glycine max HOM05D000480 ORTHO05D000313 6.0e-10 68.9 224 31.7
TPR.G33840 Trifolium pratense HOM05D000480 ORTHO05D000313 6.0e-10 68.9 248 27.8
Phvul.009G085000 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 7.9e-10 68.6 232 31.0
arahy.Tifrunner.gnm1.ann1.RU9RLH Arachis hypogaea HOM05D000480 ORTHO05D000313 1.0e-09 68.2 215 30.7
Eucgr.L00123 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.0e-09 68.2 181 33.1
Cfa012320 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.3e-09 67.8 171 32.2
Psat4g105000 Pisum sativum HOM05D000480 ORTHO05D000313 1.3e-09 67.8 225 30.2
VMungo1309G0918 Vigna mungo HOM05D000480 ORTHO05D000313 2.3e-09 67.0 229 31.4
Medtr8g073260 Medicago truncatula HOM05D000480 ORTHO05D000313 3.0e-09 66.6 225 27.6
Phvul.011G163400 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 3.9e-09 66.2 233 28.8
TPR.G22961 Trifolium pratense HOM05D000480 ORTHO05D000313 3.9e-09 66.2 248 27.0
Cfa012460 Carpinus fangiana HOM05D000480 ORTHO05D000313 5.1e-09 65.9 221 30.3
Glyma.04G058500 Glycine max HOM05D000480 ORTHO05D000313 5.1e-09 65.9 232 30.2
Thecc.10G055800 Theobroma cacao HOM05D000480 ORTHO05D000313 5.1e-09 65.9 252 29.0
QL01p009195 Quercus lobata HOM05D000480 ORTHO05D000313 1.1e-08 64.7 261 32.6
Medtr8g069880 Medicago truncatula HOM05D000480 ORTHO05D000313 1.5e-08 64.3 227 28.6
Cfa010029 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.5e-08 63.5 236 29.2
Cfa021235 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.5e-08 63.5 115 37.4
Glyma.06G237900 Glycine max HOM05D000480 ORTHO05D000313 2.5e-08 63.5 237 29.5
Manes.01G088000 Manihot esculenta HOM05D000480 ORTHO05D000313 2.5e-08 63.5 174 32.2
Nn6g33764 Nelumbo nucifera HOM05D000448 ORTHO05D000291 2.5e-08 63.5 222 31.5
Psat4g133880 Pisum sativum HOM05D000480 ORTHO05D000313 2.5e-08 63.5 226 28.8
Thecc.03G241000 Theobroma cacao HOM05D000480 ORTHO05D000313 2.5e-08 63.5 208 30.8
Nn2g15093 Nelumbo nucifera HOM05D000480 ORTHO05D000313 3.3e-08 63.2 196 31.6
BcaNung04661 Brassica carinata HOM05D000480 ORTHO05D000313 4.3e-08 62.8 212 31.6
Eucgr.H05145 Eucalyptus grandis HOM05D000480 ORTHO05D000313 4.3e-08 62.8 123 34.1
arahy.Tifrunner.gnm1.ann1.1FAI2T Arachis hypogaea HOM05D000480 ORTHO05D000313 5.6e-08 62.4 195 29.2
TAR374G1370 Trochodendron aralioides HOM05D000480 ORTHO05D000313 5.6e-08 62.4 215 29.8
CiPaw.11G073300 Carya illinoinensis HOM05D000480 ORTHO05D000313 7.4e-08 62.0 249 29.7
Gorai.004G289300 Gossypium raimondii HOM05D000480 ORTHO05D000313 7.4e-08 62.0 236 30.5
Hma1.2p1_2021F.1_g311300 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 9.6e-08 61.6 183 28.4
Hma1.2p1_2512F.1_g323650 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 9.6e-08 61.6 187 27.3
Lj3g0000562 Lotus japonicus HOM05D000480 ORTHO05D000313 9.6e-08 61.6 250 29.6
Medtr8g072510 Medicago truncatula HOM05D000480 ORTHO05D000313 9.6e-08 61.6 231 27.7
Duzib168G1606 Durio zibethinus HOM05D000448 ORTHO05D000291 1.3e-07 61.2 233 27.9
Psat4g128440 Pisum sativum HOM05D000480 ORTHO05D000313 1.3e-07 61.2 225 28.4
Thhalv10027198m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.6e-07 60.8 120 36.7
Medtr8g467780 Medicago truncatula HOM05D000480 ORTHO05D000313 1.6e-07 60.8 236 28.8
TAR374G0960 Trochodendron aralioides HOM05D000480 ORTHO05D000313 1.6e-07 60.8 218 28.9
Cfa012316 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.1e-07 60.5 139 36.0
Lj7A549T57 Lonicera japonica HOM05D000448 ORTHO05D000313 2.1e-07 60.5 141 33.3
ECA248G2383 Erigeron canadensis HOM05D000480 ORTHO05D000313 2.8e-07 60.1 145 35.2
Cfa010311 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.7e-07 59.7 204 28.4
Duzib114G0019 Durio zibethinus HOM05D000480 ORTHO05D000313 3.7e-07 59.7 228 33.8
Gohir.D03G168550 Gossypium hirsutum HOM05D000480 ORTHO05D000313 3.7e-07 59.7 147 35.4
Thecc.03G241100 Theobroma cacao HOM05D000480 ORTHO05D000313 3.7e-07 59.7 209 31.6
TAR375G0700 Trochodendron aralioides HOM05D000480 ORTHO05D000313 3.7e-07 59.7 198 31.8
CiPaw.11G073500 Carya illinoinensis HOM05D000480 ORTHO05D000313 4.8e-07 59.3 231 26.4
Gohir.A03G003850 Gossypium hirsutum HOM05D000480 ORTHO05D000313 4.8e-07 59.3 185 33.5
Hma1.2p1_1008F.1_g247240 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 4.8e-07 59.3 179 30.2
RcHm_v2.0_Chr7g0205421 Rosa chinensis HOM05D000480 ORTHO05D000313 4.8e-07 59.3 208 29.3
Thecc.07G096600 Theobroma cacao HOM05D000480 ORTHO05D000313 4.8e-07 59.3 227 30.0
TAR375G1115 Trochodendron aralioides HOM05D000480 ORTHO05D000313 4.8e-07 59.3 251 29.1
Dinv25126 Davidia involucrata HOM05D000480 ORTHO05D000313 6.2e-07 58.9 215 29.3
Duzib116G0747 Durio zibethinus HOM05D000480 ORTHO05D000313 8.1e-07 58.5 217 29.0
Gohir.D08G271000 Gossypium hirsutum HOM05D000480 ORTHO05D000313 8.1e-07 58.5 246 28.9
Lsat_1_v5_gn_1_43561 Lactuca sativa HOM05D000250 ORTHO05D011838 8.1e-07 58.5 101 33.7
MSTRG.12044 Avicennia marina HOM05D000448 ORTHO05D000291 1.1e-06 58.2 189 30.2
Dinv25166 Davidia involucrata HOM05D000480 ORTHO05D000313 1.1e-06 58.2 228 32.0
Thhalv10013476m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.1e-06 58.2 119 33.6
Gohir.D08G271200 Gossypium hirsutum HOM05D000480 ORTHO05D000313 1.1e-06 58.2 137 35.0
Nitab4.5_0003567g0060 Nicotiana tabacum HOM05D000480 ORTHO05D000313 1.1e-06 58.2 232 30.2
Thecc.03G241400 Theobroma cacao HOM05D000480 ORTHO05D000313 1.1e-06 58.2 235 29.8
Lj7C682G5 Lonicera japonica HOM05D000544 ORTHO05D000291 1.4e-06 57.8 192 27.6
QL01p009528 Quercus lobata HOM05D000480 ORTHO05D000313 1.4e-06 57.8 69 44.9
CANSAT21G1221 Cannabis sativa HOM05D000480 ORTHO05D000313 1.8e-06 57.4 217 30.4
Eucgr.L00134 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.8e-06 57.4 204 29.4
Thhalv10028682m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.8e-06 57.4 184 29.9
Gohir.A08G249936 Gossypium hirsutum HOM05D000480 ORTHO05D000313 1.8e-06 57.4 236 29.7
Gorai.004G289700 Gossypium raimondii HOM05D000480 ORTHO05D000313 1.8e-06 57.4 247 29.6
Medtr7g451420 Medicago truncatula HOM05D000480 ORTHO05D000313 1.8e-06 57.4 113 31.9
Prupe.5G057700 Prunus persica HOM05D000480 ORTHO05D000313 1.8e-06 57.4 244 28.3
PGSC0003DMG400031158 Solanum tuberosum HOM05D000448 ORTHO05D000291 1.8e-06 57.4 238 31.1
Atru.chr11.181 Acer truncatum HOM05D000480 ORTHO05D000313 2.4e-06 57.0 250 30.0
Eucgr.H05144 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.4e-06 57.0 124 30.6
Gorai.004G289500 Gossypium raimondii HOM05D000480 ORTHO05D000313 2.4e-06 57.0 246 28.5
MBI11_g10515_MAGBIO Magnolia biondii HOM05D000448 ORTHO05D000291 2.4e-06 57.0 224 27.7
MSTRG.13297 Avicennia marina HOM05D000480 ORTHO05D000313 3.1e-06 56.6 151 31.1
Duzib106G1079 Durio zibethinus HOM05D000480 ORTHO05D000313 3.1e-06 56.6 109 33.9
BcaC06g33524 Brassica carinata HOM05D000480 ORTHO05D000313 4.0e-06 56.2 125 33.6
CiPaw.04G146800 Carya illinoinensis HOM05D000448 ORTHO05D000291 4.0e-06 56.2 200 28.5
Cc00_g32620 Coffea canephora HOM05D000480 ORTHO05D000313 4.0e-06 56.2 231 28.6
Eucgr.C00701 Eucalyptus grandis HOM05D000448 ORTHO05D000291 4.0e-06 56.2 118 32.2
Gohir.D05G300100 Gossypium hirsutum HOM05D000480 ORTHO05D000313 4.0e-06 56.2 250 28.4
Gohir.D08G271300 Gossypium hirsutum HOM05D000480 ORTHO05D000313 4.0e-06 56.2 119 34.5
TPR.G26544 Trifolium pratense HOM05D000480 ORTHO05D000313 4.0e-06 56.2 242 26.4
TAR374G1657 Trochodendron aralioides HOM05D000480 ORTHO05D000313 4.0e-06 56.2 244 29.1
MSTRG.10528 Avicennia marina HOM05D000448 ORTHO05D000291 5.3e-06 55.8 193 29.0
Cfa011048 Carpinus fangiana HOM05D000448 ORTHO05D000291 5.3e-06 55.8 108 35.2
Gorai.011G163500 Gossypium raimondii HOM05D000480 ORTHO05D000313 5.3e-06 55.8 172 32.0
Psat4g134080 Pisum sativum HOM05D000480 ORTHO05D000313 5.3e-06 55.8 202 28.7
arahy.Tifrunner.gnm1.ann1.U4K0HX Arachis hypogaea HOM05D000480 ORTHO05D000313 6.9e-06 55.5 128 31.2
BcaB01g05047 Brassica carinata HOM05D000480 ORTHO05D000313 6.9e-06 55.5 127 32.3
Dinv25132 Davidia involucrata HOM05D000480 ORTHO05D000313 6.9e-06 55.5 244 27.9
TPR.G29443 Trifolium pratense HOM05D000480 ORTHO05D000313 6.9e-06 55.5 238 26.1
A05p04900 Brassica napus HOM05D000480 ORTHO05D000313 9.0e-06 55.1 162 30.9
BraA05t19464Z Brassica rapa HOM05D000480 ORTHO05D000313 9.0e-06 55.1 162 30.9
Duzib151G0332 Durio zibethinus HOM05D000480 ORTHO05D000313 9.0e-06 55.1 129 33.3
Gohir.A08G249948 Gossypium hirsutum HOM05D000480 ORTHO05D000313 9.0e-06 55.1 113 37.2
Lj3g0015410 Lotus japonicus HOM05D000480 ORTHO05D000313 9.0e-06 55.1 122 30.3
MBI07_g04976_MAGBIO Magnolia biondii HOM05D000448 ORTHO05D000291 9.0e-06 55.1 248 26.2
Medtr8g040930 Medicago truncatula HOM05D000480 ORTHO05D000313 9.0e-06 55.1 200 26.0
Medtr8g041240 Medicago truncatula HOM05D000480 ORTHO05D000313 9.0e-06 55.1 200 26.0
Oeu037431.2 Olea europaea HOM05D000480 ORTHO05D000313 9.0e-06 55.1 246 30.9
Peaxi162Scf00853g00424 Petunia axillaris HOM05D000480 ORTHO05D000313 9.0e-06 55.1 87 40.2
TAR374G0103 Trochodendron aralioides HOM05D000480 ORTHO05D000313 9.0e-06 55.1 237 29.5


User provided reference genes

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