Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 9.4e-107 390.2 196 100.0
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 1.5e-80 303.1 199 77.9
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 5.4e-78 294.7 202 72.3
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 2.5e-75 285.8 223 68.6
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 2.1e-74 282.7 186 74.2
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.6e-72 275.8 200 69.5
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 4.9e-71 271.6 198 68.2
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 1.1e-70 270.4 198 68.2
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 1.4e-70 270.0 188 72.3
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.9e-70 269.6 197 67.5
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 4.1e-70 268.5 182 71.4
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 7.0e-70 267.7 201 67.7
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 7.0e-70 267.7 196 67.3
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 9.2e-70 267.3 205 67.3
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 2.1e-69 266.2 201 68.2
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 2.7e-69 265.8 196 70.4
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 4.6e-69 265.0 197 68.5
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 4.6e-69 265.0 199 66.8
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 6.0e-69 264.6 197 66.0
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 6.0e-69 264.6 200 66.5
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 3.0e-68 262.3 197 68.5
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 3.9e-68 261.9 197 67.5
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 3.3e-67 258.8 182 73.1
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 3.3e-67 258.8 187 69.5
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 4.3e-67 258.5 210 63.8
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 4.3e-67 258.5 176 71.6
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 9.5e-67 257.3 201 65.7
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.2e-66 256.9 201 65.7
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.2e-66 256.9 197 64.0
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 6.2e-66 254.6 201 65.2
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 3.1e-65 252.3 170 71.8
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 3.1e-65 252.3 171 71.9
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 5.2e-65 251.5 205 60.5
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 1.2e-64 250.4 241 57.7
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 4.4e-64 248.4 196 66.3
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 5.8e-64 248.1 196 66.3
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 5.8e-64 248.1 180 65.6
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 9.9e-64 247.3 180 65.6
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 1.7e-63 246.5 196 62.8
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 2.2e-63 246.1 183 68.9
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 2.2e-63 246.1 189 68.3
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 4.9e-63 245.0 180 64.4
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 6.4e-63 244.6 184 68.5
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 4.1e-62 241.9 196 61.7
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 4.1e-62 241.9 187 65.8
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 9.2e-62 240.7 209 59.3
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 1.2e-61 240.4 203 61.1
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 1.6e-61 240.0 194 64.9
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.5e-61 238.8 182 65.4
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 4.6e-61 238.4 201 62.2
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 4.6e-61 238.4 193 61.1
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 6.0e-61 238.0 184 65.2
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 1.0e-60 237.3 176 66.5
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.0e-60 237.3 181 65.2
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.0e-60 237.3 184 64.7
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 1.3e-60 236.9 186 63.4
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.3e-60 236.1 194 59.8
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 6.6e-60 234.6 201 60.7
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 1.1e-59 233.8 187 62.6
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 1.9e-59 233.0 177 66.7
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 1.6e-58 229.9 179 64.2
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 3.6e-58 228.8 176 65.3
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 6.2e-58 228.0 181 60.8
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.1e-57 227.3 218 54.1
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 1.1e-57 227.3 182 60.4
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 1.1e-57 227.3 186 60.8
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 1.8e-57 226.5 185 61.1
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 2.4e-57 226.1 173 64.7
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 3.1e-57 225.7 185 62.2
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 5.2e-57 224.9 178 64.0
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 9.9e-56 220.7 183 58.5
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 9.9e-56 220.7 196 58.7
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 2.2e-55 219.5 191 57.6
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 3.8e-55 218.8 207 58.5
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 9.2e-54 214.2 186 58.1
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 4.6e-53 211.8 186 57.5
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 4.6e-53 211.8 186 58.1
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 2.3e-52 209.5 185 57.8
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 9.0e-49 197.6 207 53.6
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 2.0e-48 196.4 184 53.3
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 2.6e-48 196.1 177 59.9
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 7.6e-48 194.5 164 60.4
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 1.3e-47 193.7 204 51.5
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 4.9e-47 191.8 203 51.2
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 6.4e-47 191.4 198 55.6
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 1.4e-46 190.3 181 55.2
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 3.2e-46 189.1 200 51.0
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 9.3e-46 187.6 202 51.5
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 7.8e-45 184.5 203 50.7
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 1.3e-44 183.7 203 50.2
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 3.0e-44 182.6 203 51.2
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 1.1e-43 180.6 204 50.5
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 2.5e-43 179.5 172 54.1
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 2.5e-43 179.5 204 50.0
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 2.5e-43 179.5 203 51.2
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 1.3e-42 177.2 164 54.3
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 8.1e-42 174.5 201 51.2
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 8.1e-42 174.5 198 51.0
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 2.4e-41 172.9 198 50.5
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 2.4e-41 172.9 201 51.2
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 2.4e-41 172.9 201 51.2
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 4.0e-41 172.2 188 52.1
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 3.4e-40 169.1 198 50.0
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 2.4e-38 162.9 126 65.1
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 9.3e-38 161.0 203 45.8
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 3.9e-36 155.6 182 44.0
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 9.6e-35 151.0 96 74.0
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 4.8e-34 148.7 123 59.3
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.8e-33 146.7 202 47.0
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 2.7e-29 132.9 94 69.1
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 7.1e-22 108.2 98 57.1
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 1.5e-19 100.5 187 36.9
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 2.2e-18 96.7 175 34.3
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 2.2e-18 96.7 190 32.6
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 2.7e-13 79.7 205 32.7


User provided reference genes

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