Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p050753 Quercus lobata HOM05D000003 ORTHO05D050632 4.3e-52 207.6 97 100.0
QL12p016138 Quercus lobata HOM05D000003 ORTHO05D050632 5.8e-17 90.9 89 43.8
QL10p050657 Quercus lobata HOM05D000003 ORTHO05D000126 8.2e-11 70.5 96 32.3
QL04p091229 Quercus lobata HOM05D000003 ORTHO05D000006 2.0e-09 65.9 97 28.9
Medtr2g078880 Medicago truncatula HOM05D000003 ORTHO05D000006 2.6e-09 65.5 86 39.5
BraA07t30522Z Brassica rapa HOM05D000003 ORTHO05D000006 3.4e-09 65.1 80 37.5
Manes.17G012850 Manihot esculenta HOM05D000003 ORTHO05D000006 3.4e-09 65.1 85 37.6
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 4.5e-09 64.7 98 29.6
BolC4t23478H Brassica oleracea HOM05D000003 ORTHO05D000006 1.7e-08 62.8 80 35.0
CiPaw.09G186400 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.7e-08 62.8 84 34.5
Atru.chr2.1508 Acer truncatum HOM05D000003 ORTHO05D000006 2.2e-08 62.4 98 33.7
Atru.chr1.2596 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-08 62.0 98 33.7
Manes.11G107251 Manihot esculenta HOM05D000003 ORTHO05D000006 5.0e-08 61.2 80 36.2
CiPaw.01G096500 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.5e-08 60.8 85 34.1
Atru.chr13.2083 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-07 60.1 81 34.6
Atru.chr3.2272 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 60.1 81 34.6
CANSAT35G0159 Cannabis sativa HOM05D000003 ORTHO05D000006 1.4e-07 59.7 83 31.3
Atru.chr9.814 Acer truncatum HOM05D000003 ORTHO05D000006 1.9e-07 59.3 97 32.0
CiPaw.08G126800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.9e-07 59.3 85 32.9
Atru.chr4.252 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-07 58.9 97 32.0
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 2.5e-07 58.9 82 31.7
Ah.10g031070 Amaranthus hybridus HOM05D000003 ORTHO05D000006 3.2e-07 58.5 80 36.2
Gohir.A11G238400 Gossypium hirsutum HOM05D000003 ORTHO05D000006 3.2e-07 58.5 97 32.0
BcaB05g25247 Brassica carinata HOM05D000003 ORTHO05D000411 4.2e-07 58.2 95 31.6
Manes.05G055002 Manihot esculenta HOM05D000003 ORTHO05D000004 4.2e-07 58.2 82 36.6
Atru.chr6.1886 Acer truncatum HOM05D000003 ORTHO05D000006 5.5e-07 57.8 97 27.8
CANSAT56G1417 Cannabis sativa HOM05D000003 ORTHO05D000004 5.5e-07 57.8 72 43.1
Gohir.1Z049540 Gossypium hirsutum HOM05D000003 ORTHO05D000006 5.5e-07 57.8 98 30.6
PSO675G4188 Papaver somniferum HOM05D000003 ORTHO05D000004 5.5e-07 57.8 97 32.0
Atru.chr12.1952 Acer truncatum HOM05D000003 ORTHO05D000006 7.2e-07 57.4 97 30.9
Duzib128G0111 Durio zibethinus HOM05D000003 ORTHO05D000006 7.2e-07 57.4 89 33.7
Gohir.A12G210150 Gossypium hirsutum HOM05D000003 ORTHO05D000006 7.2e-07 57.4 92 29.3
Atru.chr7.811 Acer truncatum HOM05D000003 ORTHO05D000004 9.3e-07 57.0 96 33.3
Gohir.A07G187699 Gossypium hirsutum HOM05D000003 ORTHO05D000006 9.3e-07 57.0 98 30.6
QL02p065046 Quercus lobata HOM05D000003 ORTHO05D000006 9.3e-07 57.0 97 29.9
TWI23G1168 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.3e-07 57.0 99 30.3
Atru.chr5.2264 Acer truncatum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 81 33.3
Atru.chr6.65 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-06 56.6 80 33.8
Atru.chr7.1973 Acer truncatum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 98 28.6
CiPaw.01G042200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-06 56.6 84 28.6
Atru.chr2.931 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 86 34.9
TAR536G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.6e-06 56.2 78 30.8
Atru.chr11.167 Acer truncatum HOM05D000003 ORTHO05D000006 2.1e-06 55.8 78 30.8
Atru.chr4.2116 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 55.8 98 34.7
BcaB01g02064 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-06 55.8 85 31.8
BolC5t33322H Brassica oleracea HOM05D000003 ORTHO05D024352 2.1e-06 55.8 79 34.2
CiPaw.06G011600 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.1e-06 55.8 71 39.4
Gohir.1Z049393 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.1e-06 55.8 98 29.6
Manes.02G206350 Manihot esculenta HOM05D000003 ORTHO05D000006 2.1e-06 55.8 94 31.9
Gohir.1Z049350 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.7e-06 55.5 84 33.3
Gohir.1Z049785 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.7e-06 55.5 89 33.7
Gohir.A09G031377 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.7e-06 55.5 98 30.6
Atru.chr6.1099 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-06 55.1 98 30.6
Atru.chr6.1670 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-06 55.1 70 35.7
QL08p005297 Quercus lobata HOM05D000003 ORTHO05D000006 3.6e-06 55.1 80 30.0
Thecc.01G173700 Theobroma cacao HOM05D000003 ORTHO05D000126 3.6e-06 55.1 96 29.2
Atru.chr7.397 Acer truncatum HOM05D000003 ORTHO05D000006 4.6e-06 54.7 83 32.5
Gohir.A11G238433 Gossypium hirsutum HOM05D000003 ORTHO05D000006 4.6e-06 54.7 88 27.3
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.6e-06 54.7 83 31.3
Atru.chr10.150 Acer truncatum HOM05D000003 ORTHO05D000004 6.1e-06 54.3 65 43.1
Atru.chr3.2326 Acer truncatum HOM05D000003 ORTHO05D000006 6.1e-06 54.3 83 31.3
Atru.chr6.1114 Acer truncatum HOM05D000003 ORTHO05D000124 6.1e-06 54.3 81 33.3
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 7.9e-06 53.9 98 31.6
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.9e-06 53.9 80 32.5
CANSAT56G0006 Cannabis sativa HOM05D000003 ORTHO05D000006 7.9e-06 53.9 82 31.7
Carub.0002s0756 Capsella rubella HOM05D000003 ORTHO05D000006 7.9e-06 53.9 87 29.9
Carub.0005s0877 Capsella rubella HOM05D000003 ORTHO05D000006 7.9e-06 53.9 87 29.9
AUR62022228 Chenopodium quinoa HOM05D000003 ORTHO05D000006 7.9e-06 53.9 96 28.1
Gohir.A09G000185 Gossypium hirsutum HOM05D000003 ORTHO05D000006 7.9e-06 53.9 98 28.6
Nn5g27257 Nelumbo nucifera HOM05D000003 ORTHO05D000004 7.9e-06 53.9 96 31.2
QL02p060718 Quercus lobata HOM05D000003 ORTHO05D000126 7.9e-06 53.9 81 34.6
QL07p031105 Quercus lobata HOM05D000003 ORTHO05D000006 7.9e-06 53.9 79 34.2


User provided reference genes

Program Settings