Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 9.6e-67 256.9 152 100.0
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 3.5e-24 115.5 99 65.7
Haze_03348 Corylus avellana HOM05D008362 ORTHO05D010554 8.0e-21 104.4 125 59.2
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.6e-16 90.1 79 59.5
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 5.0e-15 85.1 150 51.3
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 6.6e-15 84.7 91 52.7
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 9.5e-14 80.9 87 57.5
TWI18G0011 Tripterygium wilfordii HOM05D008362 ORTHO05D010554 3.0e-12 75.9 87 57.5
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 4.0e-12 75.5 94 53.2
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 5.2e-12 75.1 111 45.0
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 1.2e-11 73.9 83 50.6
Nitab4.5_0002671g0030 Nicotiana tabacum HOM05D008362 ORTHO05D010554 2.6e-11 72.8 126 50.8
Thecc.01G217300 Theobroma cacao HOM05D008362 ORTHO05D010554 7.5e-11 71.2 100 49.0
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 1.3e-10 70.5 73 56.2
arahy.Tifrunner.gnm1.ann1.L802W9 Arachis hypogaea HOM05D008362 ORTHO05D010554 1.7e-10 70.1 93 52.7
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 2.9e-10 69.3 55 72.7
Sopen06g034630 Solanum pennellii HOM05D008362 ORTHO05D010554 2.9e-10 69.3 111 45.0
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 3.7e-10 68.9 98 51.0
Ciclev10024415m.g Citrus clementina HOM05D008362 ORTHO05D010554 4.9e-10 68.6 42 85.7
Nitab4.5_0003020g0140 Nicotiana tabacum HOM05D008362 ORTHO05D010554 6.4e-10 68.2 100 43.0
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 1.1e-09 67.4 68 57.4
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 1.1e-09 67.4 40 87.5
HanXRQChr06g0172231 Helianthus annuus HOM05D008362 ORTHO05D010554 1.4e-09 67.0 83 45.8
Glyma.16G089400 Glycine max HOM05D008362 ORTHO05D010554 1.8e-09 66.6 86 55.8
CANSAT01G1703 Cannabis sativa HOM05D008362 ORTHO05D010554 4.1e-09 65.5 97 50.5
Duzib211G0336 Durio zibethinus HOM05D008362 ORTHO05D010554 4.1e-09 65.5 99 47.5
Manes.13G051000 Manihot esculenta HOM05D008362 ORTHO05D010554 4.1e-09 65.5 82 53.7
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 4.1e-09 65.5 49 81.6
Sc17g0002020 Simmondsia chinensis HOM05D008362 ORTHO05D010554 9.2e-09 64.3 76 50.0
Gohir.D07G096800 Gossypium hirsutum HOM05D008362 ORTHO05D010554 1.2e-08 63.9 68 57.4
Gorai.001G104200 Gossypium raimondii HOM05D008362 ORTHO05D010554 1.6e-08 63.5 68 55.9
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 2.7e-08 62.8 50 82.0
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 3.5e-08 62.4 63 61.9
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 4.6e-08 62.0 48 68.8
MSTRG.20975 Avicennia marina HOM05D008362 ORTHO05D010554 5.9e-08 61.6 84 52.4
Hund05585 Selenicereus undatus HOM05D008362 ORTHO05D010554 5.9e-08 61.6 81 49.4
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 7.8e-08 61.2 38 86.8
Prupe.8G196600 Prunus persica HOM05D008362 ORTHO05D010554 1.7e-07 60.1 110 44.5
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 2.3e-07 59.7 54 64.8
Cfa021480 Carpinus fangiana HOM05D008362 ORTHO05D010554 3.0e-07 59.3 46 78.3
Ca_23217_v3 Cicer arietinum L. HOM05D008362 ORTHO05D010554 3.9e-07 58.9 49 79.6
TAR636G3018 Trochodendron aralioides HOM05D008362 ORTHO05D010554 5.0e-07 58.5 59 64.4
Phvul.010G022800 Phaseolus vulgaris HOM05D008362 ORTHO05D010554 6.6e-07 58.2 60 61.7
Sabra02G0188000 Salix brachista HOM05D008362 ORTHO05D010554 6.6e-07 58.2 92 44.6
Solyc06g083250.4 Solanum lycopersicum HOM05D008362 ORTHO05D010554 6.6e-07 58.2 118 41.5
Potri.002G246900 Populus trichocarpa HOM05D008362 ORTHO05D010554 1.9e-06 56.6 96 41.7
unitig_746.g26595 Utricularia gibba HOM05D008362 ORTHO05D010554 2.5e-06 56.2 74 51.4
Atru.chr6.1443 Acer truncatum HOM05D008362 ORTHO05D010554 4.3e-06 55.5 86 48.8
Peaxi162Scf01312g00019 Petunia axillaris HOM05D008362 ORTHO05D010554 5.6e-06 55.1 91 42.9
vmacro02790 Vaccinium macrocarpon HOM05D008362 ORTHO05D010554 7.3e-06 54.7 40 65.0


User provided reference genes

Program Settings