Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 0.0e+00 1570.4 785 100.0
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 0.0e+00 1394.0 939 78.0
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 6.5e-308 1060.4 948 61.4
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 9.1e-302 1040.0 1034 57.2
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 3.1e-217 759.2 947 45.5
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 1.5e-216 756.9 932 46.6
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 1.1e-214 750.7 930 45.8
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 2.3e-212 743.0 935 46.2
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 2.5e-211 739.6 948 44.6
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 2.5e-211 739.6 952 45.6
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 3.3e-211 739.2 950 44.5
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 7.4e-211 738.0 947 44.7
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 6.9e-209 731.5 946 44.1
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 2.5e-206 723.0 939 43.7
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 4.2e-206 722.2 940 43.3
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 7.9e-205 718.0 941 43.5
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.0e-204 717.6 941 43.6
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 3.9e-204 715.7 940 43.9
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.1e-201 707.6 942 43.3
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 1.8e-201 706.8 810 49.0
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 2.6e-200 703.0 885 51.2
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.9e-200 701.8 942 43.2
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 3.8e-199 699.1 939 43.1
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 3.8e-199 699.1 960 42.7
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 1.1e-198 697.6 948 44.3
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.1e-198 697.6 931 44.4
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 2.3e-196 689.9 948 42.1
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 8.5e-191 671.4 914 43.1
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 4.6e-189 665.6 949 41.8
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 5.1e-188 662.1 990 41.4
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 3.8e-183 646.0 942 41.4
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 1.5e-179 634.0 924 40.9
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 1.9e-174 617.1 925 40.6
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 3.2e-174 616.3 903 41.6
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 2.7e-165 586.6 943 38.5
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 2.0e-163 580.5 928 39.3
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 3.4e-163 579.7 956 38.2
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 5.7e-163 578.9 991 37.6
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 1.4e-161 574.3 978 37.7
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 4.1e-161 572.8 735 45.2
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.9e-158 563.9 770 42.7
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 1.2e-157 561.2 977 36.9
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.8e-156 557.4 849 39.6
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 5.2e-156 555.8 905 38.2
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 4.1e-153 546.2 910 37.6
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 2.5e-150 537.0 914 38.1
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 5.7e-147 525.8 905 37.7
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 7.0e-145 518.8 804 39.2
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 3.5e-144 516.5 903 37.1
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 6.0e-144 515.8 903 37.0
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 7.8e-144 515.4 898 36.6
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 8.0e-141 505.4 915 37.9
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 1.3e-135 488.0 906 35.5
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 1.7e-135 487.6 888 37.2
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 8.6e-135 485.3 976 33.0
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 1.1e-134 485.0 928 34.9
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 2.8e-133 480.3 946 35.1
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 1.1e-132 478.4 868 35.5
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 3.1e-132 476.9 641 42.0
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 3.4e-131 473.4 734 40.3
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 7.1e-129 465.7 603 42.5
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.9e-126 457.6 833 36.0
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 2.5e-126 457.2 923 34.8
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 4.3e-126 456.4 884 35.9
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.1e-121 441.8 695 39.6
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 6.2e-117 426.0 754 36.9
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 8.1e-117 425.6 891 35.2
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 5.2e-116 422.9 886 33.9
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 1.2e-112 411.8 941 32.6
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.7e-111 407.9 731 37.5
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 3.8e-106 390.2 780 33.7
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 4.0e-100 370.2 379 58.3
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.4e-97 360.9 385 56.9
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.5e-91 340.1 1010 27.3
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.5e-91 340.1 1010 27.3
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 1.3e-58 232.3 417 35.7
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 5.5e-57 226.9 934 23.8
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.2e-54 219.2 171 63.7
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 3.3e-54 217.6 232 50.9
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 3.4e-46 191.0 161 60.9
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 6.6e-42 176.8 653 26.5
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 3.1e-36 157.9 119 66.4
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 1.1e-33 149.4 122 66.4
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 2.8e-32 144.8 175 48.0
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 8.9e-31 139.8 884 22.2
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 3.7e-29 134.4 297 34.0
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 4.1e-28 131.0 119 56.3
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 2.7e-27 128.3 99 63.6
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 8.6e-26 123.2 67 88.1
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 8.6e-26 123.2 67 88.1
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 3.1e-23 114.8 72 75.0
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 6.8e-23 113.6 113 53.1
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 2.2e-21 108.6 69 76.8
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.2e-21 108.6 776 21.8
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 2.9e-21 108.2 74 64.9
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 7.5e-14 83.6 55 69.1
Medtr7g110110 Medicago truncatula HOM05D007419 ORTHO05D009327 6.8e-07 60.5 91 38.5
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.0e-06 58.9 316 23.1


User provided reference genes

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