Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p047099 Quercus lobata HOM05D005078 ORTHO05D007574 1.3e-185 652.9 322 100.0
QL08p030872 Quercus lobata HOM05D005078 ORTHO05D007574 1.7e-150 536.2 344 82.0
QL11p019326 Quercus lobata HOM05D005078 ORTHO05D007574 5.1e-150 534.6 344 82.3
Atru.chr6.903 Acer truncatum HOM05D005078 ORTHO05D007574 2.5e-133 479.2 339 74.0
CiPaw.06G150900 Carya illinoinensis HOM05D005078 ORTHO05D007574 1.8e-131 473.0 344 73.5
Cfa005576 Carpinus fangiana HOM05D005078 ORTHO05D007574 4.0e-131 471.9 338 73.7
Cc02_g21860 Coffea canephora HOM05D005078 ORTHO05D007574 2.0e-130 469.5 335 74.0
Haze_10783 Corylus avellana HOM05D005078 ORTHO05D007574 5.8e-130 468.0 343 72.9
CSS0037915 Camellia sinensis var. sinensis HOM05D005078 ORTHO05D007574 2.2e-129 466.1 337 72.4
DCAR_001802 Daucus carota HOM05D005078 ORTHO05D007574 6.5e-129 464.5 338 72.5
CSS0009626 Camellia sinensis var. sinensis HOM05D005078 ORTHO05D007574 1.9e-128 463.0 337 72.1
TAR628G0147 Trochodendron aralioides HOM05D005078 ORTHO05D007574 4.2e-128 461.8 341 72.7
Actinidia04428 Actinidia chinensis HOM05D005078 ORTHO05D007574 9.3e-128 460.7 337 72.4
Rhsim05G0111000 Rhododendron simsii HOM05D005078 ORTHO05D007574 7.9e-127 457.6 338 71.6
Thecc.02G143700 Theobroma cacao HOM05D005078 ORTHO05D007574 2.3e-126 456.1 331 73.1
Lj9A318G98 Lonicera japonica HOM05D005078 ORTHO05D007574 3.0e-126 455.7 337 72.7
Oeu037204.1 Olea europaea HOM05D005078 ORTHO05D007574 3.9e-126 455.3 337 71.2
Prupe.1G560000 Prunus persica HOM05D005078 ORTHO05D007574 1.1e-125 453.8 341 71.0
Ciclev10000359m.g Citrus clementina HOM05D005078 ORTHO05D007574 2.5e-125 452.6 339 71.4
FAN18G1729 Fragaria x ananassa HOM05D005078 ORTHO05D007574 5.7e-125 451.4 330 72.4
Duzib052G0049 Durio zibethinus HOM05D005078 ORTHO05D007574 2.1e-124 449.5 331 71.6
MD15G1415600 Malus domestica HOM05D005078 ORTHO05D007574 4.8e-124 448.4 341 69.8
FAN13G1064 Fragaria x ananassa HOM05D005078 ORTHO05D007574 6.3e-124 448.0 330 71.8
Manes.10G130600 Manihot esculenta HOM05D005078 ORTHO05D007574 8.2e-124 447.6 340 70.0
TWI59G0763 Tripterygium wilfordii HOM05D005078 ORTHO05D007574 8.2e-124 447.6 344 68.3
RcHm_v2.0_Chr7g0225491 Rosa chinensis HOM05D005078 ORTHO05D007574 1.4e-123 446.8 330 72.7
MD08G1222200 Malus domestica HOM05D005078 ORTHO05D007574 3.1e-123 445.7 335 70.7
COL.COLO4_20871 Corchorus olitorius HOM05D005078 ORTHO05D007574 4.1e-123 445.3 331 71.3
Eucgr.I02694 Eucalyptus grandis HOM05D005078 ORTHO05D007574 4.1e-123 445.3 339 69.0
PGSC0003DMG400005500 Solanum tuberosum HOM05D005078 ORTHO05D007574 4.1e-123 445.3 336 70.5
MBI03_g13502_MAGBIO Magnolia biondii HOM05D005078 ORTHO05D007574 9.0e-123 444.1 335 71.0
vmacro19912 Vaccinium macrocarpon HOM05D005078 ORTHO05D007574 2.0e-122 443.0 333 70.6
GSVIVG01029707001 Vitis vinifera HOM05D005078 ORTHO05D007574 2.0e-122 443.0 309 75.7
CANSAT56G3597 Cannabis sativa HOM05D005078 ORTHO05D007574 3.4e-122 442.2 342 69.3
Gohir.D02G194900 Gossypium hirsutum HOM05D005078 ORTHO05D007574 3.4e-122 442.2 331 70.4
Glyma.08G075100 Glycine max HOM05D005078 ORTHO05D007574 1.3e-121 440.3 335 69.3
Solyc10g047050.2 Solanum lycopersicum HOM05D005078 ORTHO05D007574 1.7e-121 439.9 336 69.6
ClCG09G013630 Citrullus lanatus HOM05D005078 ORTHO05D007574 2.9e-121 439.1 329 69.3
CsaV3_7G006040 Cucumis sativus L. HOM05D005078 ORTHO05D007574 2.9e-121 439.1 329 69.6
ECA236G3503 Erigeron canadensis HOM05D005078 ORTHO05D007574 2.9e-121 439.1 307 75.9
Gorai.005G217700 Gossypium raimondii HOM05D005078 ORTHO05D007574 2.9e-121 439.1 331 70.1
Cpa.g.sc63.26 Carica papaya HOM05D005078 ORTHO05D007574 5.0e-121 438.3 344 68.0
Oeu047373.1 Olea europaea HOM05D005078 ORTHO05D007574 5.0e-121 438.3 309 74.1
Phvul.002G206400 Phaseolus vulgaris HOM05D005078 ORTHO05D007574 8.4e-121 437.6 335 68.7
Sopen10g017000 Solanum pennellii HOM05D005078 ORTHO05D007574 8.4e-121 437.6 336 69.3
HanXRQChr11g0337601 Helianthus annuus HOM05D005078 ORTHO05D007574 1.1e-120 437.2 314 72.6
TWI23G1171 Tripterygium wilfordii HOM05D005078 ORTHO05D007574 5.5e-120 434.9 351 66.1
VMungo0251G0911 Vigna mungo HOM05D005078 ORTHO05D007574 7.2e-120 434.5 336 68.2
Lj4g0026324 Lotus japonicus HOM05D005078 ORTHO05D007574 1.2e-119 433.7 335 68.7
arahy.Tifrunner.gnm1.ann1.BEU0Z4 Arachis hypogaea HOM05D005078 ORTHO05D007574 1.6e-119 433.3 332 68.7
arahy.Tifrunner.gnm1.ann1.T96GLE Arachis hypogaea HOM05D005078 ORTHO05D007574 1.6e-119 433.3 332 68.7
PGR142G3913 Punica granatum HOM05D005078 ORTHO05D007574 1.6e-119 433.3 325 71.1
Dinv24223 Davidia involucrata HOM05D005078 ORTHO05D007574 6.1e-119 431.4 339 68.4
Potri.006G254900 Populus trichocarpa HOM05D005078 ORTHO05D007574 1.3e-118 430.3 334 68.9
Ca_18334_v3 Cicer arietinum L. HOM05D005078 ORTHO05D007574 1.8e-118 429.9 335 68.1
Lalb_Chr07g0189431 Lupinus albus HOM05D005078 ORTHO05D007574 1.8e-118 429.9 333 68.5
Sed0011242 Sechium edule HOM05D005078 ORTHO05D007574 2.3e-118 429.5 329 68.4
MSTRG.16563 Avicennia marina HOM05D005078 ORTHO05D007574 3.0e-118 429.1 338 68.0
Migut.B00641 Erythranthe guttata HOM05D005078 ORTHO05D007574 3.0e-118 429.1 343 66.5
Peaxi162Scf00003g03733 Petunia axillaris HOM05D005078 ORTHO05D007574 3.0e-118 429.1 329 68.7
Sabra06G0199100 Salix brachista HOM05D005078 ORTHO05D007574 6.7e-118 427.9 334 68.9
Sed0005211 Sechium edule HOM05D005078 ORTHO05D007574 8.7e-118 427.6 344 66.3
Medtr4g094300 Medicago truncatula HOM05D005078 ORTHO05D007574 3.3e-117 425.6 329 68.4
Carub.0003s1960 Capsella rubella HOM05D005078 ORTHO05D007574 4.3e-117 425.2 342 66.1
CAN.G1.26 Capsicum annuum HOM05D005078 ORTHO05D007574 5.7e-117 424.9 304 72.4
THA.LOC104826527 Tarenaya hassleriana HOM05D005078 ORTHO05D007574 7.4e-117 424.5 333 67.3
BcaC09g48935 Brassica carinata HOM05D005078 ORTHO05D007574 9.7e-117 424.1 333 67.6
A01p34970 Brassica napus HOM05D005078 ORTHO05D007574 9.7e-117 424.1 333 67.6
C01p44380 Brassica napus HOM05D005078 ORTHO05D007574 9.7e-117 424.1 333 67.6
BolC1t04403H Brassica oleracea HOM05D005078 ORTHO05D007574 9.7e-117 424.1 333 67.6
BraA01t03580Z Brassica rapa HOM05D005078 ORTHO05D007574 9.7e-117 424.1 333 67.6
TPR.G31481 Trifolium pratense HOM05D005078 ORTHO05D007574 9.7e-117 424.1 335 67.5
Lsat_1_v5_gn_7_79780 Lactuca sativa HOM05D005078 ORTHO05D007574 1.3e-116 423.7 305 73.4
Sp3g17760 Schrenkiella parvula HOM05D005078 ORTHO05D007574 1.3e-116 423.7 333 67.3
Aqoxy6G00300 Aquilegia oxysepala HOM05D005078 ORTHO05D007574 4.8e-116 421.8 327 67.9
BcaB04g20681 Brassica carinata HOM05D005078 ORTHO05D007574 4.8e-116 421.8 333 67.3
Thhalv10020106m.g Eutrema salsugineum HOM05D005078 ORTHO05D007574 4.8e-116 421.8 344 65.4
MELO3C018688.2 Cucumis melo HOM05D005078 ORTHO05D007574 8.2e-116 421.0 363 63.1
CARHR095240 Cardamine hirsuta HOM05D005078 ORTHO05D007574 2.4e-115 419.5 333 66.7
Sc14g0003200 Simmondsia chinensis HOM05D005078 ORTHO05D007574 2.4e-115 419.5 329 68.1
AL3G33190 Arabidopsis lyrata HOM05D005078 ORTHO05D007574 4.1e-115 418.7 333 66.7
AT3G19720 Arabidopsis thaliana HOM05D005078 ORTHO05D007574 5.3e-115 418.3 333 66.7
Nitab4.5_0010375g0010 Nicotiana tabacum HOM05D005078 ORTHO05D007574 9.0e-115 417.5 334 66.8
Psat7g097600 Pisum sativum HOM05D005078 ORTHO05D007574 1.5e-114 416.8 335 66.6
Gohir.A03G171500 Gossypium hirsutum HOM05D005078 ORTHO05D007574 8.5e-113 411.0 331 65.9
arahy.Tifrunner.gnm1.ann1.TCU5QQ Arachis hypogaea HOM05D005078 ORTHO05D007574 1.1e-112 410.6 286 74.1
FAN04G1076 Fragaria x ananassa HOM05D005078 ORTHO05D007574 1.4e-112 410.2 330 67.6
ATR0090G021 Amborella trichopoda HOM05D005078 ORTHO05D007574 5.5e-112 408.3 335 66.6
Aa31LG8G6520 Aethionema arabicum HOM05D005078 ORTHO05D007574 1.6e-111 406.8 375 60.3
Glyma.05G120400 Glycine max HOM05D005078 ORTHO05D007574 1.6e-111 406.8 317 67.8
PSO170G4843 Papaver somniferum HOM05D005078 ORTHO05D007574 2.3e-110 402.9 333 66.4
SGA_v2.0_scaffold332G48941 Striga asiatica HOM05D005078 ORTHO05D007574 1.5e-109 400.2 356 62.1
PSO528G0068 Papaver somniferum HOM05D005078 ORTHO05D007574 4.3e-109 398.7 333 65.8
Hund06705 Selenicereus undatus HOM05D005078 ORTHO05D007574 3.1e-107 392.5 330 65.2
HPP92_016129 Vanilla planifolia HOM05D005078 ORTHO05D007574 1.5e-106 390.2 335 62.1
AUR62031303 Chenopodium quinoa HOM05D005078 ORTHO05D007574 2.6e-101 372.9 317 64.4
Nitab4.5_0000078g0180 Nicotiana tabacum HOM05D005078 ORTHO05D007574 3.3e-101 372.5 315 64.1
EL10Ac8g19337 Beta vulgaris HOM05D005078 ORTHO05D007574 9.7e-101 370.9 330 63.0
AUR62027389 Chenopodium quinoa HOM05D005078 ORTHO05D007574 2.2e-100 369.8 317 63.7
Ah.09g232120 Amaranthus hybridus HOM05D005078 ORTHO05D007574 3.7e-100 369.0 328 62.8
SalBow5G1047 Salvia bowleyana HOM05D005078 ORTHO05D007574 3.7e-100 369.0 357 58.8
Zm00001eb408290 Zea mays HOM05D005078 ORTHO05D007574 1.1e-99 367.5 323 62.2
SEGI_00685 Sequoiadendron giganteum HOM05D005078 ORTHO05D007574 4.5e-98 362.1 341 57.8
Dinv19325 Davidia involucrata HOM05D005078 ORTHO05D007574 2.5e-96 356.3 263 71.9
Mapoly0079s0059 Marchantia polymorpha HOM05D005078 ORTHO05D007574 1.1e-93 347.4 330 57.6
SMO169G0059 Selaginella moellendorffii HOM05D005078 ORTHO05D007574 1.1e-91 340.9 330 57.9
Pp3c1_7590 Physcomitrium patens HOM05D005078 ORTHO05D007574 1.8e-91 340.1 332 54.8
Pp3c2_33000 Physcomitrium patens HOM05D005078 ORTHO05D007574 2.5e-88 329.7 328 54.9
QL08p030853 Quercus lobata HOM05D005078 ORTHO05D007574 9.4e-88 327.8 221 78.7
CBR_g24372 Chara braunii HOM05D005078 ORTHO05D007574 1.4e-78 297.4 312 50.0
FAN08G3311 Fragaria x ananassa HOM05D005078 ORTHO05D007574 1.8e-78 297.0 330 53.3
Pp3c2_33410 Physcomitrium patens HOM05D005078 ORTHO05D007574 2.2e-76 290.0 328 50.0
FvH4_5g30610 Fragaria vesca HOM05D005078 ORTHO05D007574 1.5e-64 250.8 143 86.0
Cre10.g433050 Chlamydomonas reinhardtii HOM05D005078 ORTHO05D007574 5.2e-62 242.3 341 42.2
MCO03G066 Micromonas commoda HOM05D005078 ORTHO05D007574 1.2e-58 231.1 390 35.1
PRCOL_00002637 Prasinoderma coloniale HOM05D005078 ORTHO05D007574 1.2e-47 194.5 324 38.0
QL11p019306 Quercus lobata HOM05D005078 ORTHO05D007574 4.0e-46 189.5 143 69.9
TPR.G8453 Trifolium pratense HOM05D005078 ORTHO05D007574 1.5e-40 171.0 167 58.1
Os12g0178700 Oryza sativa ssp. japonica HOM05D005078 ORTHO05D007574 3.4e-37 159.8 106 73.6
Oeu041988.1 Olea europaea HOM05D005078 ORTHO05D007574 2.6e-29 133.7 67 91.0
Dinv24226 Davidia involucrata HOM05D005078 ORTHO05D003408 1.0e-25 121.7 167 46.1
TPR.G31207 Trifolium pratense HOM05D005078 ORTHO05D007574 1.4e-19 101.3 163 42.9
CDE08G0182 Ceratophyllum demersum HOM05D005078 ORTHO05D007574 4.6e-18 96.3 69 68.1
Dinv24225 Davidia involucrata HOM05D005078 ORTHO05D007574 5.3e-14 82.8 62 75.8
BolC1t04406H Brassica oleracea HOM05D005078 ORTHO05D007574 4.6e-10 69.7 87 48.3


User provided reference genes

Program Settings