Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 7.3e-259 896.7 463 100.0
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 3.1e-156 555.8 465 66.7
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-41 174.1 399 35.8
QL11p019197 Quercus lobata HOM05D041046 ORTHO05D337496 6.0e-35 152.9 188 48.4
QL11p026821 Quercus lobata HOM05D061260 ORTHO05D009743 1.3e-34 151.8 345 35.1
QL11p026859 Quercus lobata HOM05D061260 ORTHO05D009743 3.9e-34 150.2 402 32.6
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-27 127.5 323 32.2
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 1.0e-26 125.6 300 34.3
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-25 120.9 354 30.8
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 4.0e-23 113.6 422 25.1
QL05p039032 Quercus lobata HOM05D048765 ORTHO05D009743 1.1e-20 105.5 324 30.2
QL11p043786 Quercus lobata HOM05D048765 ORTHO05D009743 1.7e-18 98.2 322 28.9
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 7.3e-17 92.8 308 28.6
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-15 88.6 425 24.9
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 2.4e-15 87.8 227 29.5
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 3.1e-15 87.4 323 27.2
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 5.3e-15 86.7 305 29.8
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 9.0e-15 85.9 300 28.7
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-14 85.5 385 24.9
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-14 85.5 385 24.9
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.6e-14 84.3 278 26.3
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 5.8e-14 83.2 223 30.5
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.9e-14 82.4 288 26.7
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 1.7e-13 81.6 224 29.5
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-13 81.3 366 26.8
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 2.9e-13 80.9 327 26.0
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 8.4e-13 79.3 281 26.0
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-12 78.6 308 23.7
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.2e-12 77.0 336 26.8
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 4.2e-12 77.0 302 26.2
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 4.2e-12 77.0 423 25.3
QL11p038513 Quercus lobata HOM05D010066 ORTHO05D009743 3.5e-11 73.9 335 26.6
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 3.5e-11 73.9 431 26.2
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 7.9e-11 72.8 256 29.3
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-10 71.2 231 25.1
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-10 71.2 231 25.1
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-10 71.2 231 25.1
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 3.9e-10 70.5 355 25.1
Haze_19278 Corylus avellana HOM05D008391 ORTHO05D009743 3.3e-09 67.4 270 25.6
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 3.3e-09 67.4 425 26.1
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 7.4e-09 66.2 269 23.8
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 9.6e-09 65.9 268 29.5
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.3e-08 65.5 251 27.5
BraA09t39256Z Brassica rapa HOM05D000249 ORTHO05D000206 2.8e-08 64.3 72 44.4
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 6.2e-08 63.2 295 24.7
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 6.2e-08 63.2 170 27.1
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 8.1e-08 62.8 150 27.3
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 8.1e-08 62.8 132 34.8
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 1.1e-07 62.4 270 24.1
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.8e-07 61.6 199 25.6
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 1.8e-07 61.6 261 24.1
A06p43040 Brassica napus HOM05D000249 ORTHO05D000206 2.4e-07 61.2 63 42.9
BraA06t24494Z Brassica rapa HOM05D000249 ORTHO05D000206 2.4e-07 61.2 63 42.9
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.4e-07 61.2 189 27.5
A01p06470 Brassica napus HOM05D000249 ORTHO05D000206 3.1e-07 60.8 132 31.8
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 6.9e-07 59.7 111 33.3
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.0e-07 59.3 108 36.1
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 1.2e-06 58.9 260 23.5
Ah.01g016270 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.5e-06 58.5 129 28.7
Ah.01g016360 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.5e-06 58.5 129 28.7
Ah.01g016440 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.5e-06 58.5 129 28.7
A06p13420 Brassica napus HOM05D000249 ORTHO05D000206 1.5e-06 58.5 64 42.2
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.5e-06 58.5 297 26.6
BraA01t00608Z Brassica rapa HOM05D000249 ORTHO05D000206 2.0e-06 58.2 132 31.8
Carub.0007s0257 Capsella rubella HOM05D000249 ORTHO05D000206 2.0e-06 58.2 180 27.2
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 2.0e-06 58.2 159 28.9
CARHR041160 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.4e-06 57.4 90 36.7
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 3.4e-06 57.4 64 43.8
CSS0015488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 4.5e-06 57.0 202 28.2
Carub.0008s0876 Capsella rubella HOM05D000249 ORTHO05D000206 4.5e-06 57.0 80 40.0
Thhalv10025597m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.5e-06 57.0 111 33.3
BolC9t59948H Brassica oleracea HOM05D000249 ORTHO05D000206 5.8e-06 56.6 85 35.3
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 5.8e-06 56.6 115 31.3
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 5.8e-06 56.6 117 29.9
TAR381G1098 Trochodendron aralioides HOM05D000249 ORTHO05D000206 5.8e-06 56.6 115 31.3
CARHR254550 Cardamine hirsuta HOM05D000249 ORTHO05D000206 7.6e-06 56.2 88 33.0
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 7.6e-06 56.2 167 26.9


User provided reference genes

Program Settings