Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 4.7e-103 377.9 189 100.0
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 1.0e-70 270.4 151 92.1
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 1.6e-39 166.8 93 93.5
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 6.6e-33 144.8 149 56.4
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.5e-32 143.7 161 55.9
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 9.0e-30 134.4 155 54.2
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.5e-29 133.7 157 51.0
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.4e-28 127.9 153 51.0
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 8.4e-28 127.9 163 49.7
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.2e-27 125.9 161 46.6
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 7.1e-27 124.8 152 51.3
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 7.1e-27 124.8 156 50.0
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.1e-27 124.8 154 50.0
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 9.3e-27 124.4 164 49.4
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 9.3e-27 124.4 161 47.2
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 6.0e-26 121.7 168 47.6
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 6.0e-26 121.7 176 44.9
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-25 120.6 175 45.1
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 3.0e-25 119.4 144 52.1
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.9e-25 119.0 175 44.6
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 5.1e-25 118.6 169 46.2
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 5.1e-25 118.6 162 46.3
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 6.7e-25 118.2 149 46.3
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.1e-24 117.5 141 53.2
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.9e-24 116.7 161 46.6
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.9e-24 116.7 162 45.7
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.5e-24 116.3 162 45.1
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.5e-24 116.3 175 43.4
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 3.3e-24 115.9 149 52.3
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 5.6e-24 115.2 152 50.0
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 7.4e-24 114.8 142 50.7
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 7.4e-24 114.8 142 50.7
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 9.6e-24 114.4 160 48.1
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-23 113.6 161 46.0
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.1e-23 113.2 135 50.4
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 2.1e-23 113.2 158 45.6
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 3.1e-22 109.4 169 45.6
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 1.2e-21 107.5 146 45.9
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 2.6e-21 106.3 145 44.8
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 5.8e-21 105.1 126 55.6
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 9.9e-21 104.4 153 44.4
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.7e-20 103.6 157 45.2
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 2.2e-20 103.2 150 46.7
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.2e-20 103.2 150 44.0
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 2.9e-20 102.8 149 47.0
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.8e-20 102.4 142 46.5
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 4.9e-20 102.1 139 47.5
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 6.4e-20 101.7 148 47.3
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 8.4e-20 101.3 157 43.9
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 8.4e-20 101.3 141 48.9
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 1.1e-19 100.9 147 45.6
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 1.4e-19 100.5 150 42.0
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.9e-19 100.1 148 43.9
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.9e-19 100.1 164 42.7
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 1.9e-19 100.1 147 45.6
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.2e-19 99.4 143 46.9
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 3.2e-19 99.4 139 46.8
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.1e-19 98.2 141 47.5
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 9.3e-19 97.8 161 42.9
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 9.3e-19 97.8 144 45.1
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 9.3e-19 97.8 150 44.7
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 1.6e-18 97.1 150 46.0
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 2.1e-18 96.7 144 43.1
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 2.7e-18 96.3 150 44.7
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.3e-17 94.0 138 44.9
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.3e-17 93.2 157 43.3
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 2.3e-17 93.2 162 42.6
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 2.3e-17 93.2 139 43.2
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.9e-17 92.4 135 41.5
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 5.1e-17 92.0 141 44.7
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 5.1e-17 92.0 135 41.5
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 8.7e-17 91.3 141 41.1
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 8.7e-17 91.3 150 41.3
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 8.7e-17 91.3 153 43.1
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.5e-16 90.5 141 41.1
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.5e-16 90.5 156 38.5
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 1.9e-16 90.1 145 41.4
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 1.9e-16 90.1 145 42.8
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 1.9e-16 90.1 119 50.4
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.5e-16 89.7 143 43.4
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 3.3e-16 89.4 168 38.7
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 7.4e-16 88.2 144 44.4
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 1.6e-15 87.0 157 42.0
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 1.6e-15 87.0 145 40.0
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 4.8e-15 85.5 153 38.6
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 6.2e-15 85.1 129 42.6
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 6.2e-15 85.1 138 40.6
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.4e-14 84.0 146 36.3
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 1.8e-14 83.6 144 41.7
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 3.1e-14 82.8 94 55.3
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 3.1e-14 82.8 147 36.7
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.3e-14 82.0 101 49.5
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.0e-13 80.1 134 40.3
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 2.6e-13 79.7 151 37.7
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 3.4e-13 79.3 141 41.1
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 4.5e-13 79.0 160 36.2
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 5.8e-13 78.6 135 41.5
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 2.9e-12 76.3 115 44.3
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 2.9e-12 76.3 98 46.9
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 4.9e-12 75.5 133 40.6
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.9e-12 75.5 101 46.5
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 4.9e-12 75.5 159 36.5
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 4.9e-12 75.5 133 39.8
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.1e-11 74.3 166 31.9
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 3.2e-11 72.8 134 36.6
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 4.2e-11 72.4 141 38.3
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 4.2e-11 72.4 142 38.0
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 5.5e-11 72.0 140 37.9
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 6.1e-10 68.6 131 41.2
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 7.9e-10 68.2 94 43.6
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 1.0e-09 67.8 134 39.6
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 1.0e-09 67.8 87 52.9
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 1.3e-09 67.4 140 38.6
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 1.3e-09 67.4 131 41.2
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 2.3e-09 66.6 137 38.0
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 2.3e-09 66.6 151 37.1
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 3.9e-09 65.9 89 46.1
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 5.1e-09 65.5 140 39.3
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 5.1e-09 65.5 140 39.3
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 6.7e-09 65.1 113 40.7
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 1.1e-08 64.3 142 35.2
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 1.1e-08 64.3 112 39.3
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 1.5e-08 63.9 110 42.7
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 1.5e-08 63.9 110 42.7
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 1.5e-08 63.9 96 46.9
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 1.9e-08 63.5 134 35.1
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 3.3e-08 62.8 95 44.2
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 3.3e-08 62.8 137 36.5
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 4.3e-08 62.4 137 35.0
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 1.3e-07 60.8 135 37.0
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.6e-07 60.5 136 38.2
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 2.8e-07 59.7 139 36.7
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 4.8e-07 58.9 136 36.8
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 4.8e-07 58.9 136 36.8
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 6.3e-07 58.5 103 40.8
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 8.2e-07 58.2 147 34.0
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 1.8e-06 57.0 140 35.0
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 1.8e-06 57.0 133 36.1
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 1.8e-06 57.0 140 35.0
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 1.8e-06 57.0 133 36.1


User provided reference genes

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